Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400011993
CDS Infomation

pacid=37446780 polypeptide=PGSC0003DMP400008345 locus=PGSC0003DMG401004707 ID=PGSC0003DMT400011993.v4.03 annot-version=v4.03
Sequence

ATGGCTTCCAAATTCTCTGGTAGATTTTCCATGGAAGACGCTATAGAGAGAATAGTAAAC
GACCTCGAAACTCAAACACCCATGTCAGAATCAGCTTTAAAGGATCTACAAACCCTTTTG
GATCACACACTCAAAACCAACGACCCTATAGATATTGAAGACTTTTACGATGGATTATCT
TCAAGAAATCTCTCACCCACTTCGTTAATCAACTCAATTGCTTCAACGATGGATTCTTCA
CCTTCGAGTGTTTCGCTTTTGGCTTCAAAGGTTTACTTGTCTCTACTTTTGACACCTAAT
TCTCCTGTATTTACGCTTTTTACTCCGATGGCGTTTTTGTCTCTTCTTCGTTCAATTCGT
CAGGGTTTTAAGGCACCCTCATCGGTTTCCCCAGATGGGTCGGGGTCAAATAGTCAGGGG
AAGAAGAAGAGGGGGAGGGTTCGCAAAGGAGGGAGAAATGTTCGGGATGGTGAAAATGAG
AGTGAATTTGATGTTAGGATTTTGTTCATTGTGCTTGATAGGTTGAAATTGGTACTGAGT
TTAGTCCATTTGGGTAGGTTTCCAGATTGTTTGAAGAGTTTGGTACAAACTATAGCTGAA
ATTGCAGTTAAAGCAGTTGATTTATGTGGGAATTCTGGGATTTATGGGAGATTTTGTGAG
CTGTGTAATCAGATTTTGAGTGAAGTACTGAAGAGTGAACATGGAGATCAAGGGATTTCA
GCTGTTGAGGTATTGAAGTCATTGACGCCTTTAATTCTATTGGTTAAATCACCAGCAAGG
ACTTTAAGTTTGGAATTTGTGGTAAATAGAATGATGAGATTGGCGATAGAATCGAATGAT
ATAAAGAAAGCAGTTTTGAATTTTCCAAAGTATATAGTGCAAAAGGCTCCTGAAAAGGCT
GAGCCAAGGGCTGCAGCTGTTGAAGCCATTGTGGAGATTGTCAAGTTTATGGACTTTGAA
GATCAAAATGAGTTTGCTAGTCATGTGGTGAAGATGAGCCAAGGGAAAGCACATCTGCGA
CTATTAGCTGTGGACCTTATTCCAGCATTGATGATGTCGCTAAAGGATCCATTTGGGTGG
CATTCGAATGTTGAGGTTGAAAGTTCTTGGGGCTTGAGTTGTTTGGAGTTGCTGATTCAG
CGTTGTTCTGATGTAACTGCTGGAATAAGGGCTCGGGCTTTGACAAATTTGGCTCAATTG
GTGGGTTTTTTCTCTGGGAATGATAAAAGCAAATCAGTGCTGAAGAAGTTTATGGGGTTT
GATTCAGTTGGAAATGACGTTTCTGATAAGCCTGGAAGTGTAATGAATAGCATTCTGAAG
AAACGATGTATGGACGAGAAGGCTGCAGTCAGGAAGGCTGCTCTTCTTGTAATATCCAAG
CTGGCATCTCTTTCAGACAGTGCTCCAGATGAAGATTTTCTCAAGACATTGGGCATGGCA
TGTTCTGATCCACTTGTTAGCATAAGGAAAGCAGCAATTTCAGCTCTTTCAGAGGCATTT
AGGATATTCACAGAAGGTAGTGTAGTTAAGGAGTGGCTACATTCCATTCCTCGTCTAATA
ACTGATAATGAATCTAGCATACAGGAAGAGTGTGAGAATCTGTTCCTAGAGTTGGTGCTC
GACCGTATTTCTAGATCTGGATCCAGCAATCTCCTGAATCATGCATCTGAGGGTAATTCA
AATGGCAAGGCAGCAGCCTTAGAGATGAAGATGGAATTGTTATATCCTCAGGGAGTTTTA
GGTATATTGAGAGAGATATGTGATGGAGAGGTGACACCCTGGGTGAAGAAGATCTGCACA
AATTTAGGAAAGAAGAAAAAACTCAAGCCTAAGATTGTGACTACACTTCAAAATATCATA
AAGTCGTCCGAATCTCTATGGTTAAGCAATTCCATGCCAATAGATAAGTGGACAGCTCCT
CCAGGTGCTTGGTTTCTACTCTCGGAGGTGTCAACATTCCTTTCCCGAGCTACGGATTGG
GAATTCCTCCATCATCATTGGCAGCTCCTTGACAAGTATAAAGCCACTGGAGATCCTGAT
AGCTCATGGGATCCAGGTTGTCCGGAGGAAGGGCTAAATACAACATCAAGCACTTTTTCA
TGGGCTGCAGATCGTGTGCATCTTTTGCAAACAATCTCTAATGTTTCTATGGATCTGCCA
CCTGAACCTGCGGCAGATCTAGCTCATAACCTTCTTCAACGTTTAGAGGAATTCAACATG
CATTCAACAGAGGTTAATGCTCATGTGAAAGCACTCAGAACTTTGTGCAAGCGGAAGGCT
CTGAACCCTCAAGAGGGTGATTCCCTTGTTGCAAAATGGGTAAATCAGCTAATATCCAAA
TCATCCAGATTGCTAGATGCATACATGTCAAAGAATGTGGAAGAAAACGGAACTATCTTT
GTCACACCACTTGGGTGTACAACTGGAAAGGGGAAAAGAACAGTGGCATCACACTCTAAA
TTGTTACCGGAAACAATAACTGCAGTTCATACTATTGGGTCTCTAGTTACTATTTGTCCT
TCAGCTGATGTATCAACCATTGTTCCCATTTTACACACAATGATCACTTCCGGTACCAGT
AACACTAGAGCTAAAAAACCAGCAGTCGCTTCCATCTCCATAAAGCAGACTGCTCCTTCC
TTGTACATTCAAGCTTGGTTAACCATGGGCAAGATCTGCCTCACTGATGGGAAACTCGCA
AAGCGCTACATTCCTCTGTTTGTCCAGGAGCTTGAGAAGGGTGATTGTGCTTCCCTCCGC
AACAACATAGTTGTAGTGATGGCAGATTTTTGTGTACGGTATACTGCTCTAGTCGACTGT
TACCTATCAAAAATCACCAAGTGCCTACGTGATCCATGTGAACTTGTTAGAAGGCAGACA
TTTATACTACTATCCAGACTATTGCAGAGAGACTACGTCAAGTGGAGAGGAGTGCTTTTC
CTTCGGTTCCTGTTATCTCTTGTTGATGAATCAGAGACGATTAGACAATTGGCTGATTTT
CTATTTGGAAATATATTAAAAGCCAAAGCACCACTTTTGTCCTATAACAGTTTTGTAGAA
GCCATGTTTGTGCTGAATGACTGCAATGCTCATACTGGATCCAGTAATCCTCAGAATTCA
CGAAATGAGACGCGGATTTTTTCTATACGAGGAAATGATGAGAAGTCTAGGTCTTCAAGA
ATGCACATATATGTGACATTGCTAAAACAAATGGCTCCAGAACACCTACTAGCCACATTT
GCCAAAATATGTGCAGAGATCCTTGCTGCTGCATCTGATGGTTTGCTTAATATCGAGGAT
GCAACTGGACAGTCTGTTCTTCAGGATGCGTTTCAAGTTCTTTCTACTAAGGAGATCCGA
ATTTCCACTAGCCGTGGGTCGACCACAGAATCAGCAGATGTGGAAGAAGAAGGGGCAGAT
GGAGGAGCATCCTCAGCAGCAAAGGGAAGAGCAATAACACAAGCAGTCAAGAAAAGCTTA
ATCCAGAATACAATCCCGATTTTTATAGAGTTAAAACGCCTACTAGAGAGCAAAAACAGT
CCTCTAACTGGTTCTCTCATGGAATGCCTTAGGAACCTCCTCAAGGATTACAAGAGTGAG
ATTGATGACATGTTGATTGCTGATAAGCAACTCCAGAAAGAGCTCATTTACGACATGCAA
AAATATGAATCAATGAAGGCAAAGTCAGCTGCTGCTGAGGCAGTTGCAACCATGCAAAGA
CCAGATCTTTATCGGTCACCAAGTAATCCTACAACTTCAAGCTTCATGAACAAGAAATCT
GATGAGGGCAATACAAAAATAGCTTCAGCAATGGCAGATGCAGTGGCAGCTGTCGCAGCT
CGGTCAGTGCTCAGGGAAGTCAATAGAGGAACATCAACTCCACCACTAAGTGCAATGAAG
GCACCTAGGCTCAAGTCTCATTCAGCTGGAGCATTAAGCAGAGGAGACAAGCCTCCTGAA
GTGATTGAGTCTCTAAGGAGAAGGCAAAACTTCGATTCTGATGACGAAAACTGA

Peptide Sequence

PEP ID

PGSC0003DMP400008345
PEP Infomation

pacid=37446780 transcript=PGSC0003DMT400011993 locus=PGSC0003DMG401004707 ID=PGSC0003DMT400011993.v4.03 annot-version=v4.03
Sequence

MASKFSGRFSMEDAIERIVNDLETQTPMSESALKDLQTLLDHTLKTNDPIDIEDFYDGLS
SRNLSPTSLINSIASTMDSSPSSVSLLASKVYLSLLLTPNSPVFTLFTPMAFLSLLRSIR
QGFKAPSSVSPDGSGSNSQGKKKRGRVRKGGRNVRDGENESEFDVRILFIVLDRLKLVLS
LVHLGRFPDCLKSLVQTIAEIAVKAVDLCGNSGIYGRFCELCNQILSEVLKSEHGDQGIS
AVEVLKSLTPLILLVKSPARTLSLEFVVNRMMRLAIESNDIKKAVLNFPKYIVQKAPEKA
EPRAAAVEAIVEIVKFMDFEDQNEFASHVVKMSQGKAHLRLLAVDLIPALMMSLKDPFGW
HSNVEVESSWGLSCLELLIQRCSDVTAGIRARALTNLAQLVGFFSGNDKSKSVLKKFMGF
DSVGNDVSDKPGSVMNSILKKRCMDEKAAVRKAALLVISKLASLSDSAPDEDFLKTLGMA
CSDPLVSIRKAAISALSEAFRIFTEGSVVKEWLHSIPRLITDNESSIQEECENLFLELVL
DRISRSGSSNLLNHASEGNSNGKAAALEMKMELLYPQGVLGILREICDGEVTPWVKKICT
NLGKKKKLKPKIVTTLQNIIKSSESLWLSNSMPIDKWTAPPGAWFLLSEVSTFLSRATDW
EFLHHHWQLLDKYKATGDPDSSWDPGCPEEGLNTTSSTFSWAADRVHLLQTISNVSMDLP
PEPAADLAHNLLQRLEEFNMHSTEVNAHVKALRTLCKRKALNPQEGDSLVAKWVNQLISK
SSRLLDAYMSKNVEENGTIFVTPLGCTTGKGKRTVASHSKLLPETITAVHTIGSLVTICP
SADVSTIVPILHTMITSGTSNTRAKKPAVASISIKQTAPSLYIQAWLTMGKICLTDGKLA
KRYIPLFVQELEKGDCASLRNNIVVVMADFCVRYTALVDCYLSKITKCLRDPCELVRRQT
FILLSRLLQRDYVKWRGVLFLRFLLSLVDESETIRQLADFLFGNILKAKAPLLSYNSFVE
AMFVLNDCNAHTGSSNPQNSRNETRIFSIRGNDEKSRSSRMHIYVTLLKQMAPEHLLATF
AKICAEILAAASDGLLNIEDATGQSVLQDAFQVLSTKEIRISTSRGSTTESADVEEEGAD
GGASSAAKGRAITQAVKKSLIQNTIPIFIELKRLLESKNSPLTGSLMECLRNLLKDYKSE
IDDMLIADKQLQKELIYDMQKYESMKAKSAAAEAVATMQRPDLYRSPSNPTTSSFMNKKS
DEGNTKIASAMADAVAAVAARSVLREVNRGTSTPPLSAMKAPRLKSHSAGALSRGDKPPE
VIESLRRRQNFDSDDEN*

Transcript Sequence

Transcript ID

PGSC0003DMT400011993
Transcript Infomation

pacid=37446780 locus=PGSC0003DMG401004707 ID=PGSC0003DMT400011993.v4.03 annot-version=v4.03
Sequence

ATGGCTTCCAAATTCTCTGGTAGATTTTCCATGGAAGACGCTATAGAGAGAATAGTAAAC
GACCTCGAAACTCAAACACCCATGTCAGAATCAGCTTTAAAGGATCTACAAACCCTTTTG
GATCACACACTCAAAACCAACGACCCTATAGATATTGAAGACTTTTACGATGGATTATCT
TCAAGAAATCTCTCACCCACTTCGTTAATCAACTCAATTGCTTCAACGATGGATTCTTCA
CCTTCGAGTGTTTCGCTTTTGGCTTCAAAGGTTTACTTGTCTCTACTTTTGACACCTAAT
TCTCCTGTATTTACGCTTTTTACTCCGATGGCGTTTTTGTCTCTTCTTCGTTCAATTCGT
CAGGGTTTTAAGGCACCCTCATCGGTTTCCCCAGATGGGTCGGGGTCAAATAGTCAGGGG
AAGAAGAAGAGGGGGAGGGTTCGCAAAGGAGGGAGAAATGTTCGGGATGGTGAAAATGAG
AGTGAATTTGATGTTAGGATTTTGTTCATTGTGCTTGATAGGTTGAAATTGGTACTGAGT
TTAGTCCATTTGGGTAGGTTTCCAGATTGTTTGAAGAGTTTGGTACAAACTATAGCTGAA
ATTGCAGTTAAAGCAGTTGATTTATGTGGGAATTCTGGGATTTATGGGAGATTTTGTGAG
CTGTGTAATCAGATTTTGAGTGAAGTACTGAAGAGTGAACATGGAGATCAAGGGATTTCA
GCTGTTGAGGTATTGAAGTCATTGACGCCTTTAATTCTATTGGTTAAATCACCAGCAAGG
ACTTTAAGTTTGGAATTTGTGGTAAATAGAATGATGAGATTGGCGATAGAATCGAATGAT
ATAAAGAAAGCAGTTTTGAATTTTCCAAAGTATATAGTGCAAAAGGCTCCTGAAAAGGCT
GAGCCAAGGGCTGCAGCTGTTGAAGCCATTGTGGAGATTGTCAAGTTTATGGACTTTGAA
GATCAAAATGAGTTTGCTAGTCATGTGGTGAAGATGAGCCAAGGGAAAGCACATCTGCGA
CTATTAGCTGTGGACCTTATTCCAGCATTGATGATGTCGCTAAAGGATCCATTTGGGTGG
CATTCGAATGTTGAGGTTGAAAGTTCTTGGGGCTTGAGTTGTTTGGAGTTGCTGATTCAG
CGTTGTTCTGATGTAACTGCTGGAATAAGGGCTCGGGCTTTGACAAATTTGGCTCAATTG
GTGGGTTTTTTCTCTGGGAATGATAAAAGCAAATCAGTGCTGAAGAAGTTTATGGGGTTT
GATTCAGTTGGAAATGACGTTTCTGATAAGCCTGGAAGTGTAATGAATAGCATTCTGAAG
AAACGATGTATGGACGAGAAGGCTGCAGTCAGGAAGGCTGCTCTTCTTGTAATATCCAAG
CTGGCATCTCTTTCAGACAGTGCTCCAGATGAAGATTTTCTCAAGACATTGGGCATGGCA
TGTTCTGATCCACTTGTTAGCATAAGGAAAGCAGCAATTTCAGCTCTTTCAGAGGCATTT
AGGATATTCACAGAAGGTAGTGTAGTTAAGGAGTGGCTACATTCCATTCCTCGTCTAATA
ACTGATAATGAATCTAGCATACAGGAAGAGTGTGAGAATCTGTTCCTAGAGTTGGTGCTC
GACCGTATTTCTAGATCTGGATCCAGCAATCTCCTGAATCATGCATCTGAGGGTAATTCA
AATGGCAAGGCAGCAGCCTTAGAGATGAAGATGGAATTGTTATATCCTCAGGGAGTTTTA
GGTATATTGAGAGAGATATGTGATGGAGAGGTGACACCCTGGGTGAAGAAGATCTGCACA
AATTTAGGAAAGAAGAAAAAACTCAAGCCTAAGATTGTGACTACACTTCAAAATATCATA
AAGTCGTCCGAATCTCTATGGTTAAGCAATTCCATGCCAATAGATAAGTGGACAGCTCCT
CCAGGTGCTTGGTTTCTACTCTCGGAGGTGTCAACATTCCTTTCCCGAGCTACGGATTGG
GAATTCCTCCATCATCATTGGCAGCTCCTTGACAAGTATAAAGCCACTGGAGATCCTGAT
AGCTCATGGGATCCAGGTTGTCCGGAGGAAGGGCTAAATACAACATCAAGCACTTTTTCA
TGGGCTGCAGATCGTGTGCATCTTTTGCAAACAATCTCTAATGTTTCTATGGATCTGCCA
CCTGAACCTGCGGCAGATCTAGCTCATAACCTTCTTCAACGTTTAGAGGAATTCAACATG
CATTCAACAGAGGTTAATGCTCATGTGAAAGCACTCAGAACTTTGTGCAAGCGGAAGGCT
CTGAACCCTCAAGAGGGTGATTCCCTTGTTGCAAAATGGGTAAATCAGCTAATATCCAAA
TCATCCAGATTGCTAGATGCATACATGTCAAAGAATGTGGAAGAAAACGGAACTATCTTT
GTCACACCACTTGGGTGTACAACTGGAAAGGGGAAAAGAACAGTGGCATCACACTCTAAA
TTGTTACCGGAAACAATAACTGCAGTTCATACTATTGGGTCTCTAGTTACTATTTGTCCT
TCAGCTGATGTATCAACCATTGTTCCCATTTTACACACAATGATCACTTCCGGTACCAGT
AACACTAGAGCTAAAAAACCAGCAGTCGCTTCCATCTCCATAAAGCAGACTGCTCCTTCC
TTGTACATTCAAGCTTGGTTAACCATGGGCAAGATCTGCCTCACTGATGGGAAACTCGCA
AAGCGCTACATTCCTCTGTTTGTCCAGGAGCTTGAGAAGGGTGATTGTGCTTCCCTCCGC
AACAACATAGTTGTAGTGATGGCAGATTTTTGTGTACGGTATACTGCTCTAGTCGACTGT
TACCTATCAAAAATCACCAAGTGCCTACGTGATCCATGTGAACTTGTTAGAAGGCAGACA
TTTATACTACTATCCAGACTATTGCAGAGAGACTACGTCAAGTGGAGAGGAGTGCTTTTC
CTTCGGTTCCTGTTATCTCTTGTTGATGAATCAGAGACGATTAGACAATTGGCTGATTTT
CTATTTGGAAATATATTAAAAGCCAAAGCACCACTTTTGTCCTATAACAGTTTTGTAGAA
GCCATGTTTGTGCTGAATGACTGCAATGCTCATACTGGATCCAGTAATCCTCAGAATTCA
CGAAATGAGACGCGGATTTTTTCTATACGAGGAAATGATGAGAAGTCTAGGTCTTCAAGA
ATGCACATATATGTGACATTGCTAAAACAAATGGCTCCAGAACACCTACTAGCCACATTT
GCCAAAATATGTGCAGAGATCCTTGCTGCTGCATCTGATGGTTTGCTTAATATCGAGGAT
GCAACTGGACAGTCTGTTCTTCAGGATGCGTTTCAAGTTCTTTCTACTAAGGAGATCCGA
ATTTCCACTAGCCGTGGGTCGACCACAGAATCAGCAGATGTGGAAGAAGAAGGGGCAGAT
GGAGGAGCATCCTCAGCAGCAAAGGGAAGAGCAATAACACAAGCAGTCAAGAAAAGCTTA
ATCCAGAATACAATCCCGATTTTTATAGAGTTAAAACGCCTACTAGAGAGCAAAAACAGT
CCTCTAACTGGTTCTCTCATGGAATGCCTTAGGAACCTCCTCAAGGATTACAAGAGTGAG
ATTGATGACATGTTGATTGCTGATAAGCAACTCCAGAAAGAGCTCATTTACGACATGCAA
AAATATGAATCAATGAAGGCAAAGTCAGCTGCTGCTGAGGCAGTTGCAACCATGCAAAGA
CCAGATCTTTATCGGTCACCAAGTAATCCTACAACTTCAAGCTTCATGAACAAGAAATCT
GATGAGGGCAATACAAAAATAGCTTCAGCAATGGCAGATGCAGTGGCAGCTGTCGCAGCT
CGGTCAGTGCTCAGGGAAGTCAATAGAGGAACATCAACTCCACCACTAAGTGCAATGAAG
GCACCTAGGCTCAAGTCTCATTCAGCTGGAGCATTAAGCAGAGGAGACAAGCCTCCTGAA
GTGATTGAGTCTCTAAGGAGAAGGCAAAACTTCGATTCTGATGACGAAAACTGA