Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400011989
CDS Infomation

pacid=37446326 polypeptide=PGSC0003DMP400008341 locus=PGSC0003DMG400004704 ID=PGSC0003DMT400011989.v4.03 annot-version=v4.03
Sequence

ATGTCTCGGAAAGGATTGATGGAGCAGGACCTGAGTAAGTTGGATGTAACAAAGTTGCAT
CCACTTTCACCAGAGGTTATTTCTCGTCAGGCTACAATAAATATTGGTACCATTGGGCAT
GTGGCTCATGGAAAGTCAACAGTTGTAAAAGCTATATCTGGAGTGCAGACTGTTCGTTTT
AAAAATGAGCTAGAAAGAAACATCACAATTAAGCTTGGATATGCTAATGCTAAGATATAT
AAATGTGAAGAAGACCGCTGCCCTAGACCCATGTGCTACAAGGCATATGGAAGTGGAAAA
GAAGACGGTCCCATGTGTGATGTCCCCGGTTTCGAAACCTGTAGGATGAAATTGCTGAGA
CATGTATCTTTCGTTGATTGCCCCGGTCATGATATTCTCATGGCTACTATGCTTAATGGA
GCTGCAATTATGGATGGAGCATTACTTCTAATTGCTGCTAATGAGAGCTGTCCCCAACCT
CAGACTTCTGAACATTTAGCTGCTGTAGAAATTATGCGCCTCCAACACATAATAATTCTC
CAAAATAAGGTTGATCTAGTTCAGGAAAATGTTGCCATTAACCAGCATGAGGCAATTCAG
AAATTTATTCAGGGAACTGTTGCTGATGGTGCTCCAGTTGTACCAATCTCTGCACAATTG
AAGTACAACATCGATGTTGTTGCTGAATATATTGTGAAGAAAATTCCAATTCCTGAGAGG
AATTTCATTTCACCACCAAATATGATAGTCATCCGATCATTTGATGTTAATAAACCTGGT
TTTGAAGTTGATGATATCAGAGGTGGTGTCGCTGGTGGCAGTATACTTAAGGGCGTCCTG
AAGGTAAATCAACTCATTGAGGTTCGTCCCGGTATTACTGTCAAGGATGAGAGTGGCAAC
ATTAAGTGTACCCCAATATATTCAAGAATAGTGTCATTGTTTGCTGAGCAAAATGAGCTA
CAATTTGCTGTGCCCGGAGGCCTCATTGGAGTTGGAACAACTATGGATCCAACATTGACT
CGTGCTGATCGATTGGTCGGACAGGTTCTTGGGGAGGTTGGCTCACTTCCTGAAGTGTTT
GTCGAACTGGAGGTAAATTTCTTCTTGCTCCGCCGTCTTCTGGGAGTGAGGACAAAGGAC
ACGGAAAGGCAGGGTAAAGTCTCAAAGTTGGCCAAGGGAGAGATTCTCATGTTAAACATA
GGATCTATGTCAACTGGGGCTCGTGTTGTCGCTGTTAAGAATGTCTTTGCAAAACTGCAA
TTGACATCACCTGTGTGTACCAGCAAAGGTGAGAAAATTGCTCTTAGCAGGAGAATCGAG
AAGCACTGGCGTCTCATCGGTTGGGGCCAAATCCAAGCTGGTATCACCCTTGATGTTCCA
CCTTGCCCAATCTGA

Peptide Sequence

PEP ID

PGSC0003DMP400008341
PEP Infomation

pacid=37446326 transcript=PGSC0003DMT400011989 locus=PGSC0003DMG400004704 ID=PGSC0003DMT400011989.v4.03 annot-version=v4.03
Sequence

MSRKGLMEQDLSKLDVTKLHPLSPEVISRQATINIGTIGHVAHGKSTVVKAISGVQTVRF
KNELERNITIKLGYANAKIYKCEEDRCPRPMCYKAYGSGKEDGPMCDVPGFETCRMKLLR
HVSFVDCPGHDILMATMLNGAAIMDGALLLIAANESCPQPQTSEHLAAVEIMRLQHIIIL
QNKVDLVQENVAINQHEAIQKFIQGTVADGAPVVPISAQLKYNIDVVAEYIVKKIPIPER
NFISPPNMIVIRSFDVNKPGFEVDDIRGGVAGGSILKGVLKVNQLIEVRPGITVKDESGN
IKCTPIYSRIVSLFAEQNELQFAVPGGLIGVGTTMDPTLTRADRLVGQVLGEVGSLPEVF
VELEVNFFLLRRLLGVRTKDTERQGKVSKLAKGEILMLNIGSMSTGARVVAVKNVFAKLQ
LTSPVCTSKGEKIALSRRIEKHWRLIGWGQIQAGITLDVPPCPI*

Transcript Sequence

Transcript ID

PGSC0003DMT400011989
Transcript Infomation

pacid=37446326 locus=PGSC0003DMG400004704 ID=PGSC0003DMT400011989.v4.03 annot-version=v4.03
Sequence

ATGTCTCGGAAAGGATTGATGGAGCAGGACCTGAGTAAGTTGGATGTAACAAAGTTGCAT
CCACTTTCACCAGAGGTTATTTCTCGTCAGGCTACAATAAATATTGGTACCATTGGGCAT
GTGGCTCATGGAAAGTCAACAGTTGTAAAAGCTATATCTGGAGTGCAGACTGTTCGTTTT
AAAAATGAGCTAGAAAGAAACATCACAATTAAGCTTGGATATGCTAATGCTAAGATATAT
AAATGTGAAGAAGACCGCTGCCCTAGACCCATGTGCTACAAGGCATATGGAAGTGGAAAA
GAAGACGGTCCCATGTGTGATGTCCCCGGTTTCGAAACCTGTAGGATGAAATTGCTGAGA
CATGTATCTTTCGTTGATTGCCCCGGTCATGATATTCTCATGGCTACTATGCTTAATGGA
GCTGCAATTATGGATGGAGCATTACTTCTAATTGCTGCTAATGAGAGCTGTCCCCAACCT
CAGACTTCTGAACATTTAGCTGCTGTAGAAATTATGCGCCTCCAACACATAATAATTCTC
CAAAATAAGGTTGATCTAGTTCAGGAAAATGTTGCCATTAACCAGCATGAGGCAATTCAG
AAATTTATTCAGGGAACTGTTGCTGATGGTGCTCCAGTTGTACCAATCTCTGCACAATTG
AAGTACAACATCGATGTTGTTGCTGAATATATTGTGAAGAAAATTCCAATTCCTGAGAGG
AATTTCATTTCACCACCAAATATGATAGTCATCCGATCATTTGATGTTAATAAACCTGGT
TTTGAAGTTGATGATATCAGAGGTGGTGTCGCTGGTGGCAGTATACTTAAGGGCGTCCTG
AAGGTAAATCAACTCATTGAGGTTCGTCCCGGTATTACTGTCAAGGATGAGAGTGGCAAC
ATTAAGTGTACCCCAATATATTCAAGAATAGTGTCATTGTTTGCTGAGCAAAATGAGCTA
CAATTTGCTGTGCCCGGAGGCCTCATTGGAGTTGGAACAACTATGGATCCAACATTGACT
CGTGCTGATCGATTGGTCGGACAGGTTCTTGGGGAGGTTGGCTCACTTCCTGAAGTGTTT
GTCGAACTGGAGGTAAATTTCTTCTTGCTCCGCCGTCTTCTGGGAGTGAGGACAAAGGAC
ACGGAAAGGCAGGGTAAAGTCTCAAAGTTGGCCAAGGGAGAGATTCTCATGTTAAACATA
GGATCTATGTCAACTGGGGCTCGTGTTGTCGCTGTTAAGAATGTCTTTGCAAAACTGCAA
TTGACATCACCTGTGTGTACCAGCAAAGGTGAGAAAATTGCTCTTAGCAGGAGAATCGAG
AAGCACTGGCGTCTCATCGGTTGGGGCCAAATCCAAGCTGGTATCACCCTTGATGTTCCA
CCTTGCCCAATCTGA