Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400011959
CDS Infomation

pacid=37447617 polypeptide=PGSC0003DMP400008315 locus=PGSC0003DMG400004695 ID=PGSC0003DMT400011959.v4.03 annot-version=v4.03
Sequence

ATGGATAGTACAAAAGCAGCATCAGCATCAGCAGCACAAGGACCAACACCACCAGCTGAG
GAGCTGCTTAAGAAGATTCAAGAATTGGAGGCAGGACATGCTCAAATGAAGCATGAGATG
TCTAAGCTTATGATGTGTGATGATCATAGAACACAAAGACAAAGGGCACATTCTATATCA
CCACAGAGACCGCCTCGTATTCGAGCTGGTGGTGGATTTGATGGTGGTTCTGCTGCTGTG
TGGAAAAGGGGGTCAATTTCCTTCCGGCATTCGTCGCCATTGCAAAGAGAGAGTAGTAGT
AAGGGTGAGGGAGATGGTAGTAGTATTGGTGGAGGAGGTCCTGCTGCAGTGAAATTTACT
GATAGACAGTATTTGAATATATTACAATCAATGGGCCAAGCAGTGCATATACTTGATCTC
AATGGTCAAATAATTTATTGGAATCGAACTGCTGAAAAACTATATGGTTATTCTGCTGCA
GAAGCTCTTGGAAATGATCTCATTGAACTCCTAACAGATGCTCGGGATCATGATGCTGCT
AATAACATTGTACAGAGAGTGATAAGGGGTGAGAGTTGGACTGGACAGTTTCCAATTAAG
AATAAGCAAGGGGAAAGATTCCTAGTCGTTGCTACCGATACCCCTTTTTATGATGATGAT
GGTACTTTGCTTGGTGTTATTTGTATATCAAGTGATATGAGGCCTTTCCAAGAATCAGGG
CTTATGTCTATGGGAGTGAAGCAGTTGGAAGCTGATACAAGATTTAGAGCCAGAACCCTT
ACTTCTTCTAAACTTGGACTTGATCCACAGCAGCCCCTGCAAGCTGCCATTGCCTCCAAA
ATTTCTAATTTTGCCTCAAAGGTGAGCAATAAGGTTAAGTCAAAAATAAAGACAGGAGAG
AGCAGCATGTTTCGTGAAGGCGGAAGTGGAGATAGTCATTATTCTGACCATGCATTTTCT
GATGCTGCTCTCTCAGATCACAGGGAGGATGCAAATTCAAGTGGAGCAAGTACGCCTAGG
GGAGATGTTCTCCCTTCTCCTTTTGGAGTATTCTCTAATCTTGTAAAAGTGGAGCATTCT
GGGGATGAGAGTGAGGGAAAACAAGGCATTTCTAAGATTATCACCTCGAAGGCAGAGGCG
TGGATGGCGAAGAATAGCTTATCATGGCCATGGAAAGGCAATGAGCGAGAAGCGTCAGAG
TCAAGAACTACACGATCTGTGTGGCCTTGGTTAAACAATGACCAAGACAATGAGTTAAAT
CACATCAACAGTTCTAATACAGTTAAACCAGAAAATCAGGTTACTGAAACATACCGTACA
ACCACTAATGAAGCTCCAGGATCCTGGTCTTCATTTAATATTAACAGCACAAGCAGTGTT
AGTAGCTATGGAAGCACCAGCAGTAGTGCTGTTAATAAGGTGGACATGGATACTGATTGC
CTGGATTACGAAATCTTGTGGGAGGACTTGACTATCGGAGAGCAGATTGGAGAAGGATCT
TGTGGAACTGTTTATCACGGGCTGTGGTATGGATCAGATGTCGCTGTTAAAGTGTTCACC
AAGCAAGAATATTCTGAGGAATTGATATATTCCTTCAAACAGGAGATCTCCCTTATGAAA
AGACTTCGACATCCAAATATTCTTCTATTCATGGGTGCAGTTACTTCACCGCAACGTCTC
TGCATTGTCACAGAATTCCTGCCACGGGGAAGTTTGTTCAGGCTATTACAGAGGAATGCA
TCCAAATTAGAATGGAGACGACGAATCCACATGGCTTTAGACGTAGCTCGTGGCATGAAT
TATCTTCATCATCTTACCCCTCCTATAGTTCATCGCGACTTGAAGTCTTCAAATCTTCTT
GTGGACAAGAACTGGACTGTGAAGGTTGGGGACTTTGGTCTGTCACGTCTTAAACATGAA
ACATATCTAGCAACAAGGACGGGTAAAGGAACGCCTCAATGGATGGCTCCAGAAGTTCTT
CGCAATGAACCTTCAGATGAGAAGTCTGATGTATACAGTTTTGGAGTGATCCTATGGGAA
CTCGCCACGGAGAAAATCCCTTGGGATAACCTCAACACAATGCAGGTGATTGGAGCTGTA
GGATTCATGAATCAGCGGCTAGATATCCCAAAGGATGTTCATCCACAATTGGCGTCTATT
ATCGAGAGTTGTTGGCTCAGTGAGCCACAATCTCGTCCTTCATTCCAAGAGTTGATGGAA
AAACTTAAGGATCTGCAGAGACAGTACGTTATTCAGGCACAGGCAGCACGTAGCACTGCA
GGAGATAGCAGCCAGAAGGAACAGTAA

Peptide Sequence

PEP ID

PGSC0003DMP400008315
PEP Infomation

pacid=37447617 transcript=PGSC0003DMT400011959 locus=PGSC0003DMG400004695 ID=PGSC0003DMT400011959.v4.03 annot-version=v4.03
Sequence

MDSTKAASASAAQGPTPPAEELLKKIQELEAGHAQMKHEMSKLMMCDDHRTQRQRAHSIS
PQRPPRIRAGGGFDGGSAAVWKRGSISFRHSSPLQRESSSKGEGDGSSIGGGGPAAVKFT
DRQYLNILQSMGQAVHILDLNGQIIYWNRTAEKLYGYSAAEALGNDLIELLTDARDHDAA
NNIVQRVIRGESWTGQFPIKNKQGERFLVVATDTPFYDDDGTLLGVICISSDMRPFQESG
LMSMGVKQLEADTRFRARTLTSSKLGLDPQQPLQAAIASKISNFASKVSNKVKSKIKTGE
SSMFREGGSGDSHYSDHAFSDAALSDHREDANSSGASTPRGDVLPSPFGVFSNLVKVEHS
GDESEGKQGISKIITSKAEAWMAKNSLSWPWKGNEREASESRTTRSVWPWLNNDQDNELN
HINSSNTVKPENQVTETYRTTTNEAPGSWSSFNINSTSSVSSYGSTSSSAVNKVDMDTDC
LDYEILWEDLTIGEQIGEGSCGTVYHGLWYGSDVAVKVFTKQEYSEELIYSFKQEISLMK
RLRHPNILLFMGAVTSPQRLCIVTEFLPRGSLFRLLQRNASKLEWRRRIHMALDVARGMN
YLHHLTPPIVHRDLKSSNLLVDKNWTVKVGDFGLSRLKHETYLATRTGKGTPQWMAPEVL
RNEPSDEKSDVYSFGVILWELATEKIPWDNLNTMQVIGAVGFMNQRLDIPKDVHPQLASI
IESCWLSEPQSRPSFQELMEKLKDLQRQYVIQAQAARSTAGDSSQKEQ*

Transcript Sequence

Transcript ID

PGSC0003DMT400011959
Transcript Infomation

pacid=37447617 locus=PGSC0003DMG400004695 ID=PGSC0003DMT400011959.v4.03 annot-version=v4.03
Sequence

ATGGATAGTACAAAAGCAGCATCAGCATCAGCAGCACAAGGACCAACACCACCAGCTGAG
GAGCTGCTTAAGAAGATTCAAGAATTGGAGGCAGGACATGCTCAAATGAAGCATGAGATG
TCTAAGCTTATGATGTGTGATGATCATAGAACACAAAGACAAAGGGCACATTCTATATCA
CCACAGAGACCGCCTCGTATTCGAGCTGGTGGTGGATTTGATGGTGGTTCTGCTGCTGTG
TGGAAAAGGGGGTCAATTTCCTTCCGGCATTCGTCGCCATTGCAAAGAGAGAGTAGTAGT
AAGGGTGAGGGAGATGGTAGTAGTATTGGTGGAGGAGGTCCTGCTGCAGTGAAATTTACT
GATAGACAGTATTTGAATATATTACAATCAATGGGCCAAGCAGTGCATATACTTGATCTC
AATGGTCAAATAATTTATTGGAATCGAACTGCTGAAAAACTATATGGTTATTCTGCTGCA
GAAGCTCTTGGAAATGATCTCATTGAACTCCTAACAGATGCTCGGGATCATGATGCTGCT
AATAACATTGTACAGAGAGTGATAAGGGGTGAGAGTTGGACTGGACAGTTTCCAATTAAG
AATAAGCAAGGGGAAAGATTCCTAGTCGTTGCTACCGATACCCCTTTTTATGATGATGAT
GGTACTTTGCTTGGTGTTATTTGTATATCAAGTGATATGAGGCCTTTCCAAGAATCAGGG
CTTATGTCTATGGGAGTGAAGCAGTTGGAAGCTGATACAAGATTTAGAGCCAGAACCCTT
ACTTCTTCTAAACTTGGACTTGATCCACAGCAGCCCCTGCAAGCTGCCATTGCCTCCAAA
ATTTCTAATTTTGCCTCAAAGGTGAGCAATAAGGTTAAGTCAAAAATAAAGACAGGAGAG
AGCAGCATGTTTCGTGAAGGCGGAAGTGGAGATAGTCATTATTCTGACCATGCATTTTCT
GATGCTGCTCTCTCAGATCACAGGGAGGATGCAAATTCAAGTGGAGCAAGTACGCCTAGG
GGAGATGTTCTCCCTTCTCCTTTTGGAGTATTCTCTAATCTTGTAAAAGTGGAGCATTCT
GGGGATGAGAGTGAGGGAAAACAAGGCATTTCTAAGATTATCACCTCGAAGGCAGAGGCG
TGGATGGCGAAGAATAGCTTATCATGGCCATGGAAAGGCAATGAGCGAGAAGCGTCAGAG
TCAAGAACTACACGATCTGTGTGGCCTTGGTTAAACAATGACCAAGACAATGAGTTAAAT
CACATCAACAGTTCTAATACAGTTAAACCAGAAAATCAGGTTACTGAAACATACCGTACA
ACCACTAATGAAGCTCCAGGATCCTGGTCTTCATTTAATATTAACAGCACAAGCAGTGTT
AGTAGCTATGGAAGCACCAGCAGTAGTGCTGTTAATAAGGTGGACATGGATACTGATTGC
CTGGATTACGAAATCTTGTGGGAGGACTTGACTATCGGAGAGCAGATTGGAGAAGGATCT
TGTGGAACTGTTTATCACGGGCTGTGGTATGGATCAGATGTCGCTGTTAAAGTGTTCACC
AAGCAAGAATATTCTGAGGAATTGATATATTCCTTCAAACAGGAGATCTCCCTTATGAAA
AGACTTCGACATCCAAATATTCTTCTATTCATGGGTGCAGTTACTTCACCGCAACGTCTC
TGCATTGTCACAGAATTCCTGCCACGGGGAAGTTTGTTCAGGCTATTACAGAGGAATGCA
TCCAAATTAGAATGGAGACGACGAATCCACATGGCTTTAGACGTAGCTCGTGGCATGAAT
TATCTTCATCATCTTACCCCTCCTATAGTTCATCGCGACTTGAAGTCTTCAAATCTTCTT
GTGGACAAGAACTGGACTGTGAAGGTTGGGGACTTTGGTCTGTCACGTCTTAAACATGAA
ACATATCTAGCAACAAGGACGGGTAAAGGAACGCCTCAATGGATGGCTCCAGAAGTTCTT
CGCAATGAACCTTCAGATGAGAAGTCTGATGTATACAGTTTTGGAGTGATCCTATGGGAA
CTCGCCACGGAGAAAATCCCTTGGGATAACCTCAACACAATGCAGGTGATTGGAGCTGTA
GGATTCATGAATCAGCGGCTAGATATCCCAAAGGATGTTCATCCACAATTGGCGTCTATT
ATCGAGAGTTGTTGGCTCAGTGAGCCACAATCTCGTCCTTCATTCCAAGAGTTGATGGAA
AAACTTAAGGATCTGCAGAGACAGTACGTTATTCAGGCACAGGCAGCACGTAGCACTGCA
GGAGATAGCAGCCAGAAGGAACAGTAA