Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400011935
CDS Infomation

pacid=37445691 polypeptide=PGSC0003DMP400008296 locus=PGSC0003DMG400004684 ID=PGSC0003DMT400011935.v4.03 annot-version=v4.03
Sequence

ATGGAGCTCCACTTAAACGATTGCACTCTCCATTTTCCCCCAAATACTAAAAAATCCCCA
CACTTACACTTACCCAAATCCCCAAATTACTTCCGCCGGCGCCGGCGCCGGAGTCGGAGT
TGTAAGACCCAGATCTCCTCCGACGTGAGGGTTTCAGCAGTGGTGGCGGCGCCGGAACAA
TCCGGCGGGAAAATGGTAGTGGAGTTAGTGGGTGCTTTCAATGAGCTAACTGAAAGAATG
GATAGTAGTGTTCTTTCTACTAGCTCTTCTCGATTGCTGTTTAAGACTCTTAAATTGTGT
ATTCCAATTCTTCAGTCACTTCCACTTGCACCCGATGGTCGATCTCCGATATCGAAAGCT
CTGTCTGTTGCTGTAATTTTAGCTGATTTGCAGATGGATGCTGAAGTTATATCCAATGGG
CTACTAAGAGAAGTTCTGGAGGCAGGTGCTATATCAATATATGACGTGAGGGATCGGATT
GGTACCAGTACTGCTCATTTAATGCATGAAAGCTTGCGTGTGAAGCATATGGCCTTAAAG
GTAGAAGTATTGGATGATGATAGTGCAACTGCATTGAGGAAATTTTGTCTGACCTTCTAT
GATGTCAGGGCATTAGTATTAGACCTTGCCATCAAGCTCGATATGATGAGGCACCTTGAT
TATTTACCTAGGTACCGGCAGCAGATGATAGCACTTGAGGTTATGAAACTACATGCTCCT
CTAGCGCATGCCATTGGAACTAACCTATTATCTCTTGAACTCGAGGATCTTTCTTTTAGA
TACATGTTTCCTTACTCATATCTATATCTTGATGCATGGTTGAGAAGTCACGAGTCTGGA
AATAAGCCTCTGATAGATATCTGCAAGGAGCAGCTGCTTCAGTCCCTTAAATCTGATCCA
CTATTAAATGGAATGGTGAGTAAGATATCTGTTGAGGGTCGTTATAAAAGTCGTTATAGC
ACCATGAAGAAACTTTTGAGAGATGGTCGGAAGCTTGAAGAGGTGAATGACATCTTAGGT
CTAAGAGTTGTATTGACTCCTATATCAGGAGTAGATGAGTCGGAAATCGGGGAAAAGGCT
TGCTACAGAGCACGTGAAGTTGTCCAATCTTTGTGGGAAGAGATACCAAGTAGGTCAAAG
GACTATATCTTAAGGCCTAAGGCTAATGGATATAGAAGTTTGCACATGGCTGTTGATACC
AGTGAAAATGGACGGACTAGACCGCTAATGGAAATTCAAATACGAACAGCAGAAATGGAT
ATGCTAGCATCTGGAGGGCAAGCATCTCATGCATTGTACAAGGGCGGTGTTACTGATCCT
GAAGAGGCGAGGCATCTGAAGGCAATCATGATCGCTGCAGCAGAGCTTGCAGCATTGCGT
CTTAGAGATTTTCCTTCGGCGAATCAAAAAGGTCTGGATATTGACAAGAGAGGCAGGGTG
TTCCGTCTTCTTGACAAGAATGGAGATGGTAAAATAAGCATCGGCGAACTTATGGAAGTG
ATGGAAGAACTTGGTGCCCCAGGAGACGATGCGCGGGAGATGATGCAACTTCTCGATTCA
AACAGTGATGGTTTTCTGAGCTCAGATGAATTTGATATATTTCAGAACCAGGTTGAATTC
ATCCGGAATTTAGAAGATAGAGATGATCATTACCAAACACTGTTAAATGCTAAGCTGCAA
TTGGCAAACGACACGGGTTTCATTCAACTGTACAGTAAAGAGCAAGGTGGTAGTCTGGTA
ACAAATTAG

Peptide Sequence

PEP ID

PGSC0003DMP400008296
PEP Infomation

pacid=37445691 transcript=PGSC0003DMT400011935 locus=PGSC0003DMG400004684 ID=PGSC0003DMT400011935.v4.03 annot-version=v4.03
Sequence

MELHLNDCTLHFPPNTKKSPHLHLPKSPNYFRRRRRRSRSCKTQISSDVRVSAVVAAPEQ
SGGKMVVELVGAFNELTERMDSSVLSTSSSRLLFKTLKLCIPILQSLPLAPDGRSPISKA
LSVAVILADLQMDAEVISNGLLREVLEAGAISIYDVRDRIGTSTAHLMHESLRVKHMALK
VEVLDDDSATALRKFCLTFYDVRALVLDLAIKLDMMRHLDYLPRYRQQMIALEVMKLHAP
LAHAIGTNLLSLELEDLSFRYMFPYSYLYLDAWLRSHESGNKPLIDICKEQLLQSLKSDP
LLNGMVSKISVEGRYKSRYSTMKKLLRDGRKLEEVNDILGLRVVLTPISGVDESEIGEKA
CYRAREVVQSLWEEIPSRSKDYILRPKANGYRSLHMAVDTSENGRTRPLMEIQIRTAEMD
MLASGGQASHALYKGGVTDPEEARHLKAIMIAAAELAALRLRDFPSANQKGLDIDKRGRV
FRLLDKNGDGKISIGELMEVMEELGAPGDDAREMMQLLDSNSDGFLSSDEFDIFQNQVEF
IRNLEDRDDHYQTLLNAKLQLANDTGFIQLYSKEQGGSLVTN*

Transcript Sequence

Transcript ID

PGSC0003DMT400011935
Transcript Infomation

pacid=37445691 locus=PGSC0003DMG400004684 ID=PGSC0003DMT400011935.v4.03 annot-version=v4.03
Sequence

ATGGAGCTCCACTTAAACGATTGCACTCTCCATTTTCCCCCAAATACTAAAAAATCCCCA
CACTTACACTTACCCAAATCCCCAAATTACTTCCGCCGGCGCCGGCGCCGGAGTCGGAGT
TGTAAGACCCAGATCTCCTCCGACGTGAGGGTTTCAGCAGTGGTGGCGGCGCCGGAACAA
TCCGGCGGGAAAATGGTAGTGGAGTTAGTGGGTGCTTTCAATGAGCTAACTGAAAGAATG
GATAGTAGTGTTCTTTCTACTAGCTCTTCTCGATTGCTGTTTAAGACTCTTAAATTGTGT
ATTCCAATTCTTCAGTCACTTCCACTTGCACCCGATGGTCGATCTCCGATATCGAAAGCT
CTGTCTGTTGCTGTAATTTTAGCTGATTTGCAGATGGATGCTGAAGTTATATCCAATGGG
CTACTAAGAGAAGTTCTGGAGGCAGGTGCTATATCAATATATGACGTGAGGGATCGGATT
GGTACCAGTACTGCTCATTTAATGCATGAAAGCTTGCGTGTGAAGCATATGGCCTTAAAG
GTAGAAGTATTGGATGATGATAGTGCAACTGCATTGAGGAAATTTTGTCTGACCTTCTAT
GATGTCAGGGCATTAGTATTAGACCTTGCCATCAAGCTCGATATGATGAGGCACCTTGAT
TATTTACCTAGGTACCGGCAGCAGATGATAGCACTTGAGGTTATGAAACTACATGCTCCT
CTAGCGCATGCCATTGGAACTAACCTATTATCTCTTGAACTCGAGGATCTTTCTTTTAGA
TACATGTTTCCTTACTCATATCTATATCTTGATGCATGGTTGAGAAGTCACGAGTCTGGA
AATAAGCCTCTGATAGATATCTGCAAGGAGCAGCTGCTTCAGTCCCTTAAATCTGATCCA
CTATTAAATGGAATGGTGAGTAAGATATCTGTTGAGGGTCGTTATAAAAGTCGTTATAGC
ACCATGAAGAAACTTTTGAGAGATGGTCGGAAGCTTGAAGAGGTGAATGACATCTTAGGT
CTAAGAGTTGTATTGACTCCTATATCAGGAGTAGATGAGTCGGAAATCGGGGAAAAGGCT
TGCTACAGAGCACGTGAAGTTGTCCAATCTTTGTGGGAAGAGATACCAAGTAGGTCAAAG
GACTATATCTTAAGGCCTAAGGCTAATGGATATAGAAGTTTGCACATGGCTGTTGATACC
AGTGAAAATGGACGGACTAGACCGCTAATGGAAATTCAAATACGAACAGCAGAAATGGAT
ATGCTAGCATCTGGAGGGCAAGCATCTCATGCATTGTACAAGGGCGGTGTTACTGATCCT
GAAGAGGCGAGGCATCTGAAGGCAATCATGATCGCTGCAGCAGAGCTTGCAGCATTGCGT
CTTAGAGATTTTCCTTCGGCGAATCAAAAAGGTCTGGATATTGACAAGAGAGGCAGGGTG
TTCCGTCTTCTTGACAAGAATGGAGATGGTAAAATAAGCATCGGCGAACTTATGGAAGTG
ATGGAAGAACTTGGTGCCCCAGGAGACGATGCGCGGGAGATGATGCAACTTCTCGATTCA
AACAGTGATGGTTTTCTGAGCTCAGATGAATTTGATATATTTCAGAACCAGGTTGAATTC
ATCCGGAATTTAGAAGATAGAGATGATCATTACCAAACACTGTTAAATGCTAAGCTGCAA
TTGGCAAACGACACGGGTTTCATTCAACTGTACAGTAAAGAGCAAGGTGGTAGTCTGGTA
ACAAATTAG