Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400011905
CDS Infomation

pacid=37447622 polypeptide=PGSC0003DMP400008276 locus=PGSC0003DMG400004673 ID=PGSC0003DMT400011905.v4.03 annot-version=v4.03
Sequence

ATGAAGCACTATATGCAACAACGAAACACGATCTTAAGGGAGAATCACGACGCTGCCGGA
GCTACAATGCCGCCGTCGTCATCTCCAAACCCTAGCCTTTTGAAGCAGAAACCGTCGAAT
TCGCCAAGTAATCCTAGCAGTAGTAGTACAAGGAAGCATAAATCATCTAAAGAGAATGCT
CCTCCGCCGTATCATCCGTTAGATCTGAGCTCATCGCCGGCAGTTGGTTTGAAGAATAAG
AGTCCTCTGCCTCCGCGACCGCCGCCTAACTCGAATAGTTTGAAACGGAAGCTTAATTTG
GAGTCTGTTGGTACTGAGAATCTAGTTGCTGGATCTTCTGATTCTGGAGTAAAGGTCATA
GTGAGGATGAGGCCGCCAACCAAGGATGAGGAAGAGGGGGAAGTTGTTGTCCAGAAGATC
TCTAATGATTCTTTGTCCATAGCTGGGCATACTTTTACATTTGATTCTATTGCAGATACG
CAATCAACACAGGTTGATATATTCCAGCACGTGGGAGCTCCTGTTGTTGAGAATTGTCTT
GCTGGGTTTAACAGCTCAGTATTTGCTTATGGGCAGACTGGTAGTGGGAAGACATATACA
ATTTGGGGACCAGCCAACGCCTTGTTGGAAGAAAACTTGACCATTGATCAACAGGGCTTA
GCTCCACGTGTTTTTCAGAGGCTTTTTGAGCGTATTGAGGAGGAACAAATCAAGCATGCT
GACAAACAGCTCATGTATCAGTGTCGATGTTCTTTTCTTGAGATATACAATGAACAAATC
ACTGATCTGTTGGATCCTAGTCAAAAAAATCTCCAGATCAGGGAAGATGTCAGAACAGGT
GTTTATGTGGAAAATTTGACTGAGGAATGTGTGTCCTCCATGAAGGATGTGACAAAGCTT
TTGATGAAGGGAGTGTCAAACAGGAGAACTGGTGCTACAAGTGTAAATGCTGAGAGTTCA
CGTTCTCACAGTGTATTCACCTGTGTTGTTGAATCACGTTGCCAGAGCATGGCAGATGGT
ATAAGCCACCTAAAGAGGAGTAGAATAAATCTTGTTGATCTTGCTGGATCAGAAAGGCAA
AAGCTAACTGGTGCAGCTGGTGAACGCTTGAAGGAAGCAGGGAACATCAATAAATCACTT
TCACAGTTGGGGAACTTAATAAACATTCTTGCAGAAGTTTCTCAAACGGGCAAGAATAGG
CACATCCCCTATAGAGATTCCAAGTTGACATTTTTGTTACAGGAATCTCTCGGTGGGAAT
GCAAAACTCGCAATGATCTGTGCCGTTTCTCCATCCCAAAGTTGTAAGAGTGAGACTTTG
AGTACCCTGAGATTTGCCCAACGTGCAAAGGCAATAAAGAACAAGGCGGTAATCAATGAA
GAAATGCAAGATGATGTCAATGTTTTGAGAGAAGTTATACGTCAGCTAAGGGAGGAATTG
CTAAGAATGAAGGCAAATGGTTATCAAGCAGATCAGGCAGGGTGGAGCGTTCGTAGAAGC
TTAAATCTGTTAAAGTTCAGCCTTAACCATCCAATGAATCTACCTGTTGACAATGATGGT
GATACAGAAATGGAAGTTGTTGAGGAAGCTGAGCTATTAGGTCTCTTATCAGAAGGCAGT
AAAGAGAATAGTATGCTTGGGATCCTGCGGAGGACGTTTTCAAAAGGCTCTTCGTTACTT
GATTCTGCAGTACAGCATGGGGGAAAGGAGTATGGCTGCAACAGGGAGCAAGCCTCCGAG
GATACAGATGTTACCATGGAGGAAGAGGTATCTGAAACAGTTATCGAGCATGAAAGCAGT
ACTGTTGATGGTGCTGGACTGCAGAACTTCAAAAGGCTAGGTAATGATTCTTCTATGGAG
CCAACTGAAGATGAGTATGCCCTGTCTTCTGCCAGCGAAATGCTGAATCAAGGACAACGG
GAAGTGGTAGAGGACTCACCTTCAGAAAAATATCCTGAGAACTCTTCTAAAAGCTTGGAG
GGAAATACAGCCTGCACTAATCTCAGTATAGTTCAATGTGATGTGTCGCCTATTTTGGAG
CCAAGCATTTCACCAAGAGCTAATAGCAGTAGGAGAAGTGTTGGGACTTCAATGCTGAGT
GATTCAAAGAAGGATCTTGGAGATAAATTGGATACCCCAGACTTGTCCTTCACAAAGCCT
TCAAACAGTATTTGTTTGAATTCTCTATCAAATCAAAGAAACAAAAGTTGTTTCACTTCA
ACTGAACATTTGGCGGCTAGTCTTCAGCGGGGACTTGAAATTATTAGTACTCATCGACAA
AGTACATCTTTGAGGCGCTCCTCAGTCAGATTTTCTTGCAAAGCTGCTGATATTAGTGCA
ATCATACCAGTTGCTAAAGTTGATGTTGGAGTTCAAACTGTTACAAAAGATTATGAGTCA
TTTGAAGGTGGTTCAATGTTTTTGTGTAGTAAATGTAAGGCAAGAAATTCACTGCAAGAG
CTTAAAGATGCAGATGATGATGGCTCAAATTTGCAGCTGGTACCTGTTAATGGATTACAG
TTGGTATCTGCAACTGGATCACAGTCCTGTGAAAACTTCCAGATTCAAGTACCTAAAGCA
GTAGAAAAGGTCTTGGCTGGAGCTATACGGAGAGAGATGGCACTTGAAGATATATGCTCC
AAGCAAACTTTTGAAATCACGCAACTCAACCGTTTGATCCAGCAATACAAGCATGAACGA
GAATGCAATGCTATAATTAGCCAAACACGTGAAGATAAGATCATTCGCCTTGAAAGTTAT
ATGGATGGTATTTTACCAAAGGAAGAGTTCATGGAGGATGAGTTGATGGCACTGATTCAT
GAGCATAAGCTTCTGAGGGCAAAGTATGAGAATCATCCTGAAGTTTTAAGTGATAGACTT
GCACTAAGAAGAGTTCAAGAGGAGCTGGAGCGGTATCATAACTTCTTTGACTTAGGTGAG
AGGGATGTTTTGCTGGAGGAGATTCAGGATTTGAGGAGCCAGTTACAGTTTTATGTGGAC
TTTTCACCAAAGTCATCCAGGAAAGAAAATTCTCTTCTACAATTAACATATCCATGTGAG
TCCAGTGTGCCTCCAACTTTATCCACAATTCCAGAGTCCAATGAGAATGAGGAGAGTTCT
GAACAGAGTTTTGAAAGGGAGAGAATTCAATGGACTGAAACAGAGAGTAAGTGGATTTCT
CTGGTAGAAGAGTTGAGGTTAGACCTACAAACTAGCCGCACCTTGTCTGAAAAACGAAAA
CAAGAACTAGATTTGGAAAAGAAATGCTCAGAAGAGCTGAAAGAAGCAATGCAGAGGGCA
ATGCAAGGCCATGCACGAATGATTGAACAGTATGCTGAACTTGAAGAGAGACATATTCAA
CTGCTTGCAAGGCATAGGAGGGTCCAAGTTGGTATAGAGGATGTTAAAAAAGCAGCTACA
AAAGCAGGAGTTAGAGGTGCTGAATCTAAATTCATAAATGCTCTTGCTGCAGAAATTTCA
ACTCTGAGAGTGGAGAGGGAAAAGGAAAGACACTATTATAGGGATGAAAATACAGAACTT
CAGAACCAACTTAGGGATACTGCTGAAGCGGTACAAGCAGCTGGGGAATTGCTTGCACGG
CTTAAAGAAGCAGAAGAAGATATTGCAGCTGCTGAGAAACGAGCCATTCATGCAGAGAAA
GAAGCTAGCGAGGCTAATAAACAGATTCTCAAATTGAAGAAAAAACACGAGGAGGAGATC
AACAGTTTAAACCATTTACCAGAAGAACCCCGTCTACCTAAAGCTACATCAGAACCCGTA
TATGATAATACTGAGACAGGACACGATGATCAGTGGAAAGAAGAATTCGCGTCATTCTAC
AACACCAAAGAGGAGGAGGAGGATCTACCAAAATTTGGAGAGCCCTCTTCTTGGTTCTCA
GGGTATGACAGGTGCAATGTATAG

Peptide Sequence

PEP ID

PGSC0003DMP400008276
PEP Infomation

pacid=37447622 transcript=PGSC0003DMT400011905 locus=PGSC0003DMG400004673 ID=PGSC0003DMT400011905.v4.03 annot-version=v4.03
Sequence

MKHYMQQRNTILRENHDAAGATMPPSSSPNPSLLKQKPSNSPSNPSSSSTRKHKSSKENA
PPPYHPLDLSSSPAVGLKNKSPLPPRPPPNSNSLKRKLNLESVGTENLVAGSSDSGVKVI
VRMRPPTKDEEEGEVVVQKISNDSLSIAGHTFTFDSIADTQSTQVDIFQHVGAPVVENCL
AGFNSSVFAYGQTGSGKTYTIWGPANALLEENLTIDQQGLAPRVFQRLFERIEEEQIKHA
DKQLMYQCRCSFLEIYNEQITDLLDPSQKNLQIREDVRTGVYVENLTEECVSSMKDVTKL
LMKGVSNRRTGATSVNAESSRSHSVFTCVVESRCQSMADGISHLKRSRINLVDLAGSERQ
KLTGAAGERLKEAGNINKSLSQLGNLINILAEVSQTGKNRHIPYRDSKLTFLLQESLGGN
AKLAMICAVSPSQSCKSETLSTLRFAQRAKAIKNKAVINEEMQDDVNVLREVIRQLREEL
LRMKANGYQADQAGWSVRRSLNLLKFSLNHPMNLPVDNDGDTEMEVVEEAELLGLLSEGS
KENSMLGILRRTFSKGSSLLDSAVQHGGKEYGCNREQASEDTDVTMEEEVSETVIEHESS
TVDGAGLQNFKRLGNDSSMEPTEDEYALSSASEMLNQGQREVVEDSPSEKYPENSSKSLE
GNTACTNLSIVQCDVSPILEPSISPRANSSRRSVGTSMLSDSKKDLGDKLDTPDLSFTKP
SNSICLNSLSNQRNKSCFTSTEHLAASLQRGLEIISTHRQSTSLRRSSVRFSCKAADISA
IIPVAKVDVGVQTVTKDYESFEGGSMFLCSKCKARNSLQELKDADDDGSNLQLVPVNGLQ
LVSATGSQSCENFQIQVPKAVEKVLAGAIRREMALEDICSKQTFEITQLNRLIQQYKHER
ECNAIISQTREDKIIRLESYMDGILPKEEFMEDELMALIHEHKLLRAKYENHPEVLSDRL
ALRRVQEELERYHNFFDLGERDVLLEEIQDLRSQLQFYVDFSPKSSRKENSLLQLTYPCE
SSVPPTLSTIPESNENEESSEQSFERERIQWTETESKWISLVEELRLDLQTSRTLSEKRK
QELDLEKKCSEELKEAMQRAMQGHARMIEQYAELEERHIQLLARHRRVQVGIEDVKKAAT
KAGVRGAESKFINALAAEISTLRVEREKERHYYRDENTELQNQLRDTAEAVQAAGELLAR
LKEAEEDIAAAEKRAIHAEKEASEANKQILKLKKKHEEEINSLNHLPEEPRLPKATSEPV
YDNTETGHDDQWKEEFASFYNTKEEEEDLPKFGEPSSWFSGYDRCNV*

Transcript Sequence

Transcript ID

PGSC0003DMT400011905
Transcript Infomation

pacid=37447622 locus=PGSC0003DMG400004673 ID=PGSC0003DMT400011905.v4.03 annot-version=v4.03
Sequence

ATGAAGCACTATATGCAACAACGAAACACGATCTTAAGGGAGAATCACGACGCTGCCGGA
GCTACAATGCCGCCGTCGTCATCTCCAAACCCTAGCCTTTTGAAGCAGAAACCGTCGAAT
TCGCCAAGTAATCCTAGCAGTAGTAGTACAAGGAAGCATAAATCATCTAAAGAGAATGCT
CCTCCGCCGTATCATCCGTTAGATCTGAGCTCATCGCCGGCAGTTGGTTTGAAGAATAAG
AGTCCTCTGCCTCCGCGACCGCCGCCTAACTCGAATAGTTTGAAACGGAAGCTTAATTTG
GAGTCTGTTGGTACTGAGAATCTAGTTGCTGGATCTTCTGATTCTGGAGTAAAGGTCATA
GTGAGGATGAGGCCGCCAACCAAGGATGAGGAAGAGGGGGAAGTTGTTGTCCAGAAGATC
TCTAATGATTCTTTGTCCATAGCTGGGCATACTTTTACATTTGATTCTATTGCAGATACG
CAATCAACACAGGTTGATATATTCCAGCACGTGGGAGCTCCTGTTGTTGAGAATTGTCTT
GCTGGGTTTAACAGCTCAGTATTTGCTTATGGGCAGACTGGTAGTGGGAAGACATATACA
ATTTGGGGACCAGCCAACGCCTTGTTGGAAGAAAACTTGACCATTGATCAACAGGGCTTA
GCTCCACGTGTTTTTCAGAGGCTTTTTGAGCGTATTGAGGAGGAACAAATCAAGCATGCT
GACAAACAGCTCATGTATCAGTGTCGATGTTCTTTTCTTGAGATATACAATGAACAAATC
ACTGATCTGTTGGATCCTAGTCAAAAAAATCTCCAGATCAGGGAAGATGTCAGAACAGGT
GTTTATGTGGAAAATTTGACTGAGGAATGTGTGTCCTCCATGAAGGATGTGACAAAGCTT
TTGATGAAGGGAGTGTCAAACAGGAGAACTGGTGCTACAAGTGTAAATGCTGAGAGTTCA
CGTTCTCACAGTGTATTCACCTGTGTTGTTGAATCACGTTGCCAGAGCATGGCAGATGGT
ATAAGCCACCTAAAGAGGAGTAGAATAAATCTTGTTGATCTTGCTGGATCAGAAAGGCAA
AAGCTAACTGGTGCAGCTGGTGAACGCTTGAAGGAAGCAGGGAACATCAATAAATCACTT
TCACAGTTGGGGAACTTAATAAACATTCTTGCAGAAGTTTCTCAAACGGGCAAGAATAGG
CACATCCCCTATAGAGATTCCAAGTTGACATTTTTGTTACAGGAATCTCTCGGTGGGAAT
GCAAAACTCGCAATGATCTGTGCCGTTTCTCCATCCCAAAGTTGTAAGAGTGAGACTTTG
AGTACCCTGAGATTTGCCCAACGTGCAAAGGCAATAAAGAACAAGGCGGTAATCAATGAA
GAAATGCAAGATGATGTCAATGTTTTGAGAGAAGTTATACGTCAGCTAAGGGAGGAATTG
CTAAGAATGAAGGCAAATGGTTATCAAGCAGATCAGGCAGGGTGGAGCGTTCGTAGAAGC
TTAAATCTGTTAAAGTTCAGCCTTAACCATCCAATGAATCTACCTGTTGACAATGATGGT
GATACAGAAATGGAAGTTGTTGAGGAAGCTGAGCTATTAGGTCTCTTATCAGAAGGCAGT
AAAGAGAATAGTATGCTTGGGATCCTGCGGAGGACGTTTTCAAAAGGCTCTTCGTTACTT
GATTCTGCAGTACAGCATGGGGGAAAGGAGTATGGCTGCAACAGGGAGCAAGCCTCCGAG
GATACAGATGTTACCATGGAGGAAGAGGTATCTGAAACAGTTATCGAGCATGAAAGCAGT
ACTGTTGATGGTGCTGGACTGCAGAACTTCAAAAGGCTAGGTAATGATTCTTCTATGGAG
CCAACTGAAGATGAGTATGCCCTGTCTTCTGCCAGCGAAATGCTGAATCAAGGACAACGG
GAAGTGGTAGAGGACTCACCTTCAGAAAAATATCCTGAGAACTCTTCTAAAAGCTTGGAG
GGAAATACAGCCTGCACTAATCTCAGTATAGTTCAATGTGATGTGTCGCCTATTTTGGAG
CCAAGCATTTCACCAAGAGCTAATAGCAGTAGGAGAAGTGTTGGGACTTCAATGCTGAGT
GATTCAAAGAAGGATCTTGGAGATAAATTGGATACCCCAGACTTGTCCTTCACAAAGCCT
TCAAACAGTATTTGTTTGAATTCTCTATCAAATCAAAGAAACAAAAGTTGTTTCACTTCA
ACTGAACATTTGGCGGCTAGTCTTCAGCGGGGACTTGAAATTATTAGTACTCATCGACAA
AGTACATCTTTGAGGCGCTCCTCAGTCAGATTTTCTTGCAAAGCTGCTGATATTAGTGCA
ATCATACCAGTTGCTAAAGTTGATGTTGGAGTTCAAACTGTTACAAAAGATTATGAGTCA
TTTGAAGGTGGTTCAATGTTTTTGTGTAGTAAATGTAAGGCAAGAAATTCACTGCAAGAG
CTTAAAGATGCAGATGATGATGGCTCAAATTTGCAGCTGGTACCTGTTAATGGATTACAG
TTGGTATCTGCAACTGGATCACAGTCCTGTGAAAACTTCCAGATTCAAGTACCTAAAGCA
GTAGAAAAGGTCTTGGCTGGAGCTATACGGAGAGAGATGGCACTTGAAGATATATGCTCC
AAGCAAACTTTTGAAATCACGCAACTCAACCGTTTGATCCAGCAATACAAGCATGAACGA
GAATGCAATGCTATAATTAGCCAAACACGTGAAGATAAGATCATTCGCCTTGAAAGTTAT
ATGGATGGTATTTTACCAAAGGAAGAGTTCATGGAGGATGAGTTGATGGCACTGATTCAT
GAGCATAAGCTTCTGAGGGCAAAGTATGAGAATCATCCTGAAGTTTTAAGTGATAGACTT
GCACTAAGAAGAGTTCAAGAGGAGCTGGAGCGGTATCATAACTTCTTTGACTTAGGTGAG
AGGGATGTTTTGCTGGAGGAGATTCAGGATTTGAGGAGCCAGTTACAGTTTTATGTGGAC
TTTTCACCAAAGTCATCCAGGAAAGAAAATTCTCTTCTACAATTAACATATCCATGTGAG
TCCAGTGTGCCTCCAACTTTATCCACAATTCCAGAGTCCAATGAGAATGAGGAGAGTTCT
GAACAGAGTTTTGAAAGGGAGAGAATTCAATGGACTGAAACAGAGAGTAAGTGGATTTCT
CTGGTAGAAGAGTTGAGGTTAGACCTACAAACTAGCCGCACCTTGTCTGAAAAACGAAAA
CAAGAACTAGATTTGGAAAAGAAATGCTCAGAAGAGCTGAAAGAAGCAATGCAGAGGGCA
ATGCAAGGCCATGCACGAATGATTGAACAGTATGCTGAACTTGAAGAGAGACATATTCAA
CTGCTTGCAAGGCATAGGAGGGTCCAAGTTGGTATAGAGGATGTTAAAAAAGCAGCTACA
AAAGCAGGAGTTAGAGGTGCTGAATCTAAATTCATAAATGCTCTTGCTGCAGAAATTTCA
ACTCTGAGAGTGGAGAGGGAAAAGGAAAGACACTATTATAGGGATGAAAATACAGAACTT
CAGAACCAACTTAGGGATACTGCTGAAGCGGTACAAGCAGCTGGGGAATTGCTTGCACGG
CTTAAAGAAGCAGAAGAAGATATTGCAGCTGCTGAGAAACGAGCCATTCATGCAGAGAAA
GAAGCTAGCGAGGCTAATAAACAGATTCTCAAATTGAAGAAAAAACACGAGGAGGAGATC
AACAGTTTAAACCATTTACCAGAAGAACCCCGTCTACCTAAAGCTACATCAGAACCCGTA
TATGATAATACTGAGACAGGACACGATGATCAGTGGAAAGAAGAATTCGCGTCATTCTAC
AACACCAAAGAGGAGGAGGAGGATCTACCAAAATTTGGAGAGCCCTCTTCTTGGTTCTCA
GGGTATGACAGGTGCAATGTATAG