Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400011871
CDS Infomation

pacid=37447032 polypeptide=PGSC0003DMP400008251 locus=PGSC0003DMG400004662 ID=PGSC0003DMT400011871.v4.03 annot-version=v4.03
Sequence

ATGGATGTGATTTCGGCGGCGGTGGCGGCCGGCGGCGGTGGAGGTCCGGCGCCGTTCTTG
TTGAAGACATATGAGATGGTGGATGATTCGCAAACTGATGACATCGTATCATGGACTCCG
ACTGGTCACAGCTTTGTCGTGTGGAATCCTCCAGAATTCGCTCGAATTCTTCTTCCTACT
TATTTCAAACACAACAATTTCTCCAGTTTCATTCGACAGCTCAATACTTACGGCTTCCGG
AAGATTGATCCAGAAAGATGGGAATTTGCCAATGAGGAATTCTTGAAGGACCAGAAGCAT
CTACTTAAGAACATTCATCGTAGAAAACCCATTCACAGTCATAGTCACCCTCCAGGTTCC
ACAGTTGATCCAGAAAGAGCTGCATTTGAGGAAGAGATTGATAAACTTACACGTGAGAAG
TCTGGGCTCGAGGCTAATGTCTCAAGGTTCAGACAGCAACAATCTGCTGCAAAACTCCAG
CTAGAAGAACTAACTGGGCGGGTTGGCAGTATAGAGCAAAGGCAGGAGAGTTTACTGGCA
TTTGTTGAGAAGGCAATTCAAAATCCTGACTTTGTTGAGCGTCTTGCTCAGAAACTCGAG
TCCATGGATATTTCTGCATTTAGTAAGAAGAGGCGATTGCCTCAAATCGACAGCACTCAA
CCAGTCCAAGAAAGTATGTCGGTGGACAACCATAGCAGTTCTAGAGTTGAGTTTGGGAAC
CTTTCCCATCAAGACTTTTCAAATAAGCTCAGGCTTGAATTGTCACCTGCTGTTTCAGAT
ATCAATGTGCTTTCATGCAGCACCCAAAGTTCGAATGATGATGGCGGAAGCCCTGCACAT
AGGAGAATATCTGAAGGATGGTCCAGAGAAGTGCAACTTCGAACGGTAGGAGTAATTTAT
ACCCCTGAAGCAATAGAACTATCAGATACAGGAACGTCTTTTACATTGAAGATGGATTCA
TCTCTACCTCGTGCTTCAAGCAATGTTGAAAGCTCAAGACTGCATCCCTTGCCACAAAGC
CTGACATCTAACGAGGAAGTTGACGGTCACATTTCCTGCCAACTGAATCTTTCTTTGGCT
TCATGTCTTTCACAAGTCGATAAAAATCAATATTCAGTGAGGATGCCTCAAATAGGTCAA
GAGATAGGTAAACGTTTCGAATCACAGTCTGATGCCAATGACAAAATCCCTCCTACTGAT
GACAAATCTTTGCCACCTTCACATGATGCAACTGCCAACAAGCAAGTGCCTGCAGCTGCT
CCTGTTCGAGTGAACGATGTCTTTTGGGAACAGTTCCTTACTGAAAGACCAGGCTGCTCG
GATAACGAAGAGGCTAGCTCTAGCTACAAAGGGAACTCCTACGACGAGCAAGACGAGAGA
AAATCAAATCAAGGAGTAGCTAGTAACACAAGAAAGGTGGAACACCTTACCCTTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400008251
PEP Infomation

pacid=37447032 transcript=PGSC0003DMT400011871 locus=PGSC0003DMG400004662 ID=PGSC0003DMT400011871.v4.03 annot-version=v4.03
Sequence

MDVISAAVAAGGGGGPAPFLLKTYEMVDDSQTDDIVSWTPTGHSFVVWNPPEFARILLPT
YFKHNNFSSFIRQLNTYGFRKIDPERWEFANEEFLKDQKHLLKNIHRRKPIHSHSHPPGS
TVDPERAAFEEEIDKLTREKSGLEANVSRFRQQQSAAKLQLEELTGRVGSIEQRQESLLA
FVEKAIQNPDFVERLAQKLESMDISAFSKKRRLPQIDSTQPVQESMSVDNHSSSRVEFGN
LSHQDFSNKLRLELSPAVSDINVLSCSTQSSNDDGGSPAHRRISEGWSREVQLRTVGVIY
TPEAIELSDTGTSFTLKMDSSLPRASSNVESSRLHPLPQSLTSNEEVDGHISCQLNLSLA
SCLSQVDKNQYSVRMPQIGQEIGKRFESQSDANDKIPPTDDKSLPPSHDATANKQVPAAA
PVRVNDVFWEQFLTERPGCSDNEEASSSYKGNSYDEQDERKSNQGVASNTRKVEHLTL*

Transcript Sequence

Transcript ID

PGSC0003DMT400011871
Transcript Infomation

pacid=37447032 locus=PGSC0003DMG400004662 ID=PGSC0003DMT400011871.v4.03 annot-version=v4.03
Sequence

ATGGATGTGATTTCGGCGGCGGTGGCGGCCGGCGGCGGTGGAGGTCCGGCGCCGTTCTTG
TTGAAGACATATGAGATGGTGGATGATTCGCAAACTGATGACATCGTATCATGGACTCCG
ACTGGTCACAGCTTTGTCGTGTGGAATCCTCCAGAATTCGCTCGAATTCTTCTTCCTACT
TATTTCAAACACAACAATTTCTCCAGTTTCATTCGACAGCTCAATACTTACGGCTTCCGG
AAGATTGATCCAGAAAGATGGGAATTTGCCAATGAGGAATTCTTGAAGGACCAGAAGCAT
CTACTTAAGAACATTCATCGTAGAAAACCCATTCACAGTCATAGTCACCCTCCAGGTTCC
ACAGTTGATCCAGAAAGAGCTGCATTTGAGGAAGAGATTGATAAACTTACACGTGAGAAG
TCTGGGCTCGAGGCTAATGTCTCAAGGTTCAGACAGCAACAATCTGCTGCAAAACTCCAG
CTAGAAGAACTAACTGGGCGGGTTGGCAGTATAGAGCAAAGGCAGGAGAGTTTACTGGCA
TTTGTTGAGAAGGCAATTCAAAATCCTGACTTTGTTGAGCGTCTTGCTCAGAAACTCGAG
TCCATGGATATTTCTGCATTTAGTAAGAAGAGGCGATTGCCTCAAATCGACAGCACTCAA
CCAGTCCAAGAAAGTATGTCGGTGGACAACCATAGCAGTTCTAGAGTTGAGTTTGGGAAC
CTTTCCCATCAAGACTTTTCAAATAAGCTCAGGCTTGAATTGTCACCTGCTGTTTCAGAT
ATCAATGTGCTTTCATGCAGCACCCAAAGTTCGAATGATGATGGCGGAAGCCCTGCACAT
AGGAGAATATCTGAAGGATGGTCCAGAGAAGTGCAACTTCGAACGGTAGGAGTAATTTAT
ACCCCTGAAGCAATAGAACTATCAGATACAGGAACGTCTTTTACATTGAAGATGGATTCA
TCTCTACCTCGTGCTTCAAGCAATGTTGAAAGCTCAAGACTGCATCCCTTGCCACAAAGC
CTGACATCTAACGAGGAAGTTGACGGTCACATTTCCTGCCAACTGAATCTTTCTTTGGCT
TCATGTCTTTCACAAGTCGATAAAAATCAATATTCAGTGAGGATGCCTCAAATAGGTCAA
GAGATAGGTAAACGTTTCGAATCACAGTCTGATGCCAATGACAAAATCCCTCCTACTGAT
GACAAATCTTTGCCACCTTCACATGATGCAACTGCCAACAAGCAAGTGCCTGCAGCTGCT
CCTGTTCGAGTGAACGATGTCTTTTGGGAACAGTTCCTTACTGAAAGACCAGGCTGCTCG
GATAACGAAGAGGCTAGCTCTAGCTACAAAGGGAACTCCTACGACGAGCAAGACGAGAGA
AAATCAAATCAAGGAGTAGCTAGTAACACAAGAAAGGTGGAACACCTTACCCTTTGA