Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400011818
CDS Infomation

pacid=37446868 polypeptide=PGSC0003DMP400008213 locus=PGSC0003DMG400004643 ID=PGSC0003DMT400011818.v4.03 annot-version=v4.03
Sequence

ATGGCGAGAGATAGCTGCTTGGCGCGTGTGACGGCGGGGGTGGCCGTCGGTGGTGCAATT
GGTGGCGCTGTTGGTGCTGTTTATGGGACATATGAGGCTGTTAGATACAAGGTGTATAAT
GTACAGGATGTTCTACAACGCGATTATCATAAGAACATTAAATTTGGATTTATGTTAATT
ATCTTAATGATAGTTGTTTTGGCTATATCCATAGTTACTTTTGTTATACTAACAATAAGA
GCAGCAAGAAGAGAAATGTATTTGTGTTCTGCACTTATAAAGCAAATGGAAGCAACTCAA
CAAGCAGAGAGGAAGAGTATGAATAAAAGTACTGCGTCTGCTCGCGCAAATCATGATGTT
AGAGCTTCTCTTGCTGGAATAAGTGGATTAATTTGGATGTGTCGCGTTCAGGCTTCACCT
CAATCTGAATTGGTGAAGTATTTGGATCATATGGAGTCTTGCAAGAACGATCTTTTAGAC
ATATTGAATTCGATTCTTGACGAAAACAAGATTGAAGAAGGGAAGAAGCAGCTTAAAGAA
GAAGAATTCAACATGGAAGAGTTACTAGAACATGTTGTCAATATCTATTACCCGAATGGA
GCAATGAAGAATGTCGATGTGTTACTAGATCCATGTGATGGTTCTATCGCAAGATTCTCT
CGTGTTAAAGGAGATAGGATAGAATTGCAAAGGATCTTGAATAACCTGTTGCAAAATGCA
GATAAATTTACATCATCAGGACACATTACTCTTCGTGCTTGGGCTCGAAAACCTGGTTTT
GAGGAAAGTTCCAATCTTGCTCTGAATACAAGTAACTCTAGTATTGGTTGTATGCCATGT
TTACGTTTACAGAACGATGAATCTTCTGCAGAAGTGCGAGTACTGAATAGAGTTCAGCAA
GATCCTAACTGTGTGGAGTTCATATTCGAGGTGGATGATACAGGGAAAGGAATTCCGAAA
GAGAAACAGAAGTCAGTTTTTGAGAATTATGTTCAAGTTAATGATCAGACAACTTCTGTT
CATGGATCACAAGCAGGCACTGGCTTAGGCCTCAGCATTACTCAGTCGTTGGTTCGTTTA
ATGGGAGGTGAAATAGGTATCGTCGACAAGAAAATTGGTGAAAAAGGCACTTGCTTCAGA
TTCAACATTTTCCTCATAGCAAGTGATCAACCTCAACATCAAGAACATCAAGCAATTAGT
GTTAATTGTGCAAAAGAAGAAGATTTAGAGTCTCAATTAGGAGGAGATTATATATCTAAT
GACTCATATTATCATTCAGTAGCAAGTGATAACAGTATCACTAGTCATCAAAAATCCAAT
GTCATTCTTTTCATTAAGGAGGAAGAAAGAAGTCGAGTTCTTCGTAGATTCATTATGAAT
GTACTAGGCTTGAAGGTACATGTTGTGAATCGACACGAGCAGTTTCCTCAAACTCTCAAG
AAGGTGAAAGGCAAGATAACCAACTCCTCCTCGTCCTCGTGTAAATCAAAGGAAATTCCC
CTCAGTGCTCTTGATGGAACAGATATCGATATCTCATCATTTCAGAGGAGAGGCAGAGGA
CTAAGATTCATCTTGATCATAATTGACACAAGTGATGGACTAACTCGAGAAATGAGTCGT
GCTATGGCTGAGTTACGAAAGGACTTTCCTAACAATGTGTCTCTTCGTGTTGTTTGGATC
GATAAACCAGGTGTAGATGAGGATAAGCTACCTTCAACAGACATAGTCATAACAAAACCA
CTACATGGTTCTCGTTTATATCGTGTCCTCAAATTTACACACGACGAAACAACTTCAAGA
ATCAAGATTCAACAACATCCATCAGTACAAGATGTTTCTGTTGATGTTAACGGACGTTCT
AATAAGAAGTTACCTTTAACAGGAAAGAAAATTTTGGTGGTTGAGGATGATAGGATGCTA
CTTATGATTTGCAAAACCGCGGTTTCTAGGCTTGGTGCAACCACTTACACATGTAAAAAT
GGTCAAGAAGCTCTAGATGAAGTGTGCAAAGGCCTTAGTGAACAACGCGGTATAGGACCA
TCCACTCCTTCACCACCATTTGATTATATTCTAATGGATTGTGAGATGCCGGAGATGGAT
GGATTTGAAGCAACGAAATGCATTAGGAAAGAAGAGGCGCGATATGGAATTCGAATACCT
ATAATAGCTTTCACAGCACATACAGAAAAGGAAGAGACAGATAAGATTTTTCAAGCTGGA
ATGGATTATTACTTACCTAAAGAAAGCAAAGGTGAAGAGATTTTGAAAGCCATAGATTAT
ATAGAACATACAAAGGTTTAA

Peptide Sequence

PEP ID

PGSC0003DMP400008213
PEP Infomation

pacid=37446868 transcript=PGSC0003DMT400011818 locus=PGSC0003DMG400004643 ID=PGSC0003DMT400011818.v4.03 annot-version=v4.03
Sequence

MARDSCLARVTAGVAVGGAIGGAVGAVYGTYEAVRYKVYNVQDVLQRDYHKNIKFGFMLI
ILMIVVLAISIVTFVILTIRAARREMYLCSALIKQMEATQQAERKSMNKSTASARANHDV
RASLAGISGLIWMCRVQASPQSELVKYLDHMESCKNDLLDILNSILDENKIEEGKKQLKE
EEFNMEELLEHVVNIYYPNGAMKNVDVLLDPCDGSIARFSRVKGDRIELQRILNNLLQNA
DKFTSSGHITLRAWARKPGFEESSNLALNTSNSSIGCMPCLRLQNDESSAEVRVLNRVQQ
DPNCVEFIFEVDDTGKGIPKEKQKSVFENYVQVNDQTTSVHGSQAGTGLGLSITQSLVRL
MGGEIGIVDKKIGEKGTCFRFNIFLIASDQPQHQEHQAISVNCAKEEDLESQLGGDYISN
DSYYHSVASDNSITSHQKSNVILFIKEEERSRVLRRFIMNVLGLKVHVVNRHEQFPQTLK
KVKGKITNSSSSSCKSKEIPLSALDGTDIDISSFQRRGRGLRFILIIIDTSDGLTREMSR
AMAELRKDFPNNVSLRVVWIDKPGVDEDKLPSTDIVITKPLHGSRLYRVLKFTHDETTSR
IKIQQHPSVQDVSVDVNGRSNKKLPLTGKKILVVEDDRMLLMICKTAVSRLGATTYTCKN
GQEALDEVCKGLSEQRGIGPSTPSPPFDYILMDCEMPEMDGFEATKCIRKEEARYGIRIP
IIAFTAHTEKEETDKIFQAGMDYYLPKESKGEEILKAIDYIEHTKV*

Transcript Sequence

Transcript ID

PGSC0003DMT400011818
Transcript Infomation

pacid=37446868 locus=PGSC0003DMG400004643 ID=PGSC0003DMT400011818.v4.03 annot-version=v4.03
Sequence

ATGGCGAGAGATAGCTGCTTGGCGCGTGTGACGGCGGGGGTGGCCGTCGGTGGTGCAATT
GGTGGCGCTGTTGGTGCTGTTTATGGGACATATGAGGCTGTTAGATACAAGGTGTATAAT
GTACAGGATGTTCTACAACGCGATTATCATAAGAACATTAAATTTGGATTTATGTTAATT
ATCTTAATGATAGTTGTTTTGGCTATATCCATAGTTACTTTTGTTATACTAACAATAAGA
GCAGCAAGAAGAGAAATGTATTTGTGTTCTGCACTTATAAAGCAAATGGAAGCAACTCAA
CAAGCAGAGAGGAAGAGTATGAATAAAAGTACTGCGTCTGCTCGCGCAAATCATGATGTT
AGAGCTTCTCTTGCTGGAATAAGTGGATTAATTTGGATGTGTCGCGTTCAGGCTTCACCT
CAATCTGAATTGGTGAAGTATTTGGATCATATGGAGTCTTGCAAGAACGATCTTTTAGAC
ATATTGAATTCGATTCTTGACGAAAACAAGATTGAAGAAGGGAAGAAGCAGCTTAAAGAA
GAAGAATTCAACATGGAAGAGTTACTAGAACATGTTGTCAATATCTATTACCCGAATGGA
GCAATGAAGAATGTCGATGTGTTACTAGATCCATGTGATGGTTCTATCGCAAGATTCTCT
CGTGTTAAAGGAGATAGGATAGAATTGCAAAGGATCTTGAATAACCTGTTGCAAAATGCA
GATAAATTTACATCATCAGGACACATTACTCTTCGTGCTTGGGCTCGAAAACCTGGTTTT
GAGGAAAGTTCCAATCTTGCTCTGAATACAAGTAACTCTAGTATTGGTTGTATGCCATGT
TTACGTTTACAGAACGATGAATCTTCTGCAGAAGTGCGAGTACTGAATAGAGTTCAGCAA
GATCCTAACTGTGTGGAGTTCATATTCGAGGTGGATGATACAGGGAAAGGAATTCCGAAA
GAGAAACAGAAGTCAGTTTTTGAGAATTATGTTCAAGTTAATGATCAGACAACTTCTGTT
CATGGATCACAAGCAGGCACTGGCTTAGGCCTCAGCATTACTCAGTCGTTGGTTCGTTTA
ATGGGAGGTGAAATAGGTATCGTCGACAAGAAAATTGGTGAAAAAGGCACTTGCTTCAGA
TTCAACATTTTCCTCATAGCAAGTGATCAACCTCAACATCAAGAACATCAAGCAATTAGT
GTTAATTGTGCAAAAGAAGAAGATTTAGAGTCTCAATTAGGAGGAGATTATATATCTAAT
GACTCATATTATCATTCAGTAGCAAGTGATAACAGTATCACTAGTCATCAAAAATCCAAT
GTCATTCTTTTCATTAAGGAGGAAGAAAGAAGTCGAGTTCTTCGTAGATTCATTATGAAT
GTACTAGGCTTGAAGGTACATGTTGTGAATCGACACGAGCAGTTTCCTCAAACTCTCAAG
AAGGTGAAAGGCAAGATAACCAACTCCTCCTCGTCCTCGTGTAAATCAAAGGAAATTCCC
CTCAGTGCTCTTGATGGAACAGATATCGATATCTCATCATTTCAGAGGAGAGGCAGAGGA
CTAAGATTCATCTTGATCATAATTGACACAAGTGATGGACTAACTCGAGAAATGAGTCGT
GCTATGGCTGAGTTACGAAAGGACTTTCCTAACAATGTGTCTCTTCGTGTTGTTTGGATC
GATAAACCAGGTGTAGATGAGGATAAGCTACCTTCAACAGACATAGTCATAACAAAACCA
CTACATGGTTCTCGTTTATATCGTGTCCTCAAATTTACACACGACGAAACAACTTCAAGA
ATCAAGATTCAACAACATCCATCAGTACAAGATGTTTCTGTTGATGTTAACGGACGTTCT
AATAAGAAGTTACCTTTAACAGGAAAGAAAATTTTGGTGGTTGAGGATGATAGGATGCTA
CTTATGATTTGCAAAACCGCGGTTTCTAGGCTTGGTGCAACCACTTACACATGTAAAAAT
GGTCAAGAAGCTCTAGATGAAGTGTGCAAAGGCCTTAGTGAACAACGCGGTATAGGACCA
TCCACTCCTTCACCACCATTTGATTATATTCTAATGGATTGTGAGATGCCGGAGATGGAT
GGATTTGAAGCAACGAAATGCATTAGGAAAGAAGAGGCGCGATATGGAATTCGAATACCT
ATAATAGCTTTCACAGCACATACAGAAAAGGAAGAGACAGATAAGATTTTTCAAGCTGGA
ATGGATTATTACTTACCTAAAGAAAGCAAAGGTGAAGAGATTTTGAAAGCCATAGATTAT
ATAGAACATACAAAGGTTTAA