Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400011814
CDS Infomation

pacid=37448908 polypeptide=PGSC0003DMP400008210 locus=PGSC0003DMG400004640 ID=PGSC0003DMT400011814.v4.03 annot-version=v4.03
Sequence

ATGGAATTACGATTTCAATTCGTGTTTTTACTCTCTTGTATCTTCTGCATATGTTCAATC
GATAGATCTGTATCTCTTCCTTCCATAGTCAACCTCGGAATTGCCCCGGAAGATGAGAAT
TATTACAAGGGTTTATCATCTGGTGCTATAAATTGTAAAGATGGGTCGAAGAAATTCACC
AAGGCTCAGCTCAATGATGATTTTTGTGACTGTCCAGATGGGTCTGATGAGCCAGGAACT
TCGGCATGTCCCAGCGGGAAGTTTTATTGCAAAAATGCAGGGCATGCTCCTCTCTTCATA
TACTCATCTAGGGTGAATGATGGCATTTGCGATTGTTGCGATGGGAGTGATGAGCATGAT
GGTAAAGTTAAGTGCCCAAATACATGTTGGGAGGTCGGCAGAGTAGCTAGAGATAAATTG
AAGAAAAAAATTGCAACATTTCAGGAAGGTATAATTATAAGGAAGAAGGAGATTGAAGAA
GCTAAACTTGCAATAGCAAAAGAGGAAACTGAAGTCTCTAAGCTGAAAAATGAGCAGAAG
ATACTTAAAGGGAGGGTTGAGCAGCTTCAGGACAAAAAAGAACAAATAGAGAAGGTTGAG
GAGGAAGAACGGTTAAAGAGAGAAAAGGAAGAGAAGGAACGAAAGGAAGCTGATGATGCT
AAGCTTGAGGCAAGCAAAGTTGAGGAGAAAACTGAAGTTCATGAAGAAGCTGTGAAGAGT
GACATCCACGATAAGATTGGCCTCCTGGAAGACTCTCCTCCCGTAAAGGATGTGGTAGAA
GGCCATGACAAAGCTGCAGATGAAGAACAACATGGTGACCATTCCGTGAAGGATGAGTTT
CCGGTTGATGAGGTAGAGCAGGTGCCCGAGGATTCTTCCCAGCATCCTGAAATAAAAGAG
GCGTCCACCAACAACAATAAAGCTGATGTTAGTAGTAGAAATGAGGAGAAAGATGCTGCT
GAAAATATTGAGTCACTGTCAAAGGAAGAGTTAGGACGTGTTATTGGTTCTCGTTGGTTA
GGAAAAAAGAGTGAACAGGAAACTGAGTCAGTTGAGGCTGGTACAGATAGTAACCATGAT
AACCATGATGAGGTGCCATCTGATACCCATGAAGAGGAGTATCATGGATATGATTCTGAT
GTTGATGACCGCAAGTATGATGATGAACACAAGTATGACGATGATGAAAACAAGTATGAC
GATGATGACAATGAGGACCACGTTGAAGATTCTGTTGGAGAGGACCACGATTCAAGTTCT
TCATATAAGTCCGAGTCTGATGATGATTCTGATTTTGCAGATACTACCACCACAACTAGT
CCTTCCTGGACGGAGAAGATACAACAAACTGTAAAGAGAATTTTTCGGTCTGTCAATTTG
TTCCAAACTCCAGTGAACATTTCTGATGCTAATTGCATACGCAAAGAGTACGATGAGGCA
AGTGCTAAGTTGACAAAAATTGAATCAAGGCTATCCAGCTTGAAGCAAAAGTTGAAACAT
GATTTTGGACCGGAGAAGGAATTCTATTCATTCCATGGACAATGTTTCGAGAGCAAGGAG
AACAAGTACACATACAAGATTTGCCCTTTCAAAGAAGCTACCCAAGTTGAGGGCTACAGC
ACAACTCGTTTGGGGAACTGGGATAAATTTGAGGATTCCTACAGAACTATGCAATTTACA
AACGGCGACCATTGCTGGAATGGCCCAAATAGAAGTGTAAAGGTAAAATTAAGGTGTGGT
TTGAAAAATGAGGTAACTGATATAGATGAACCGAGCCGCTGCGAATATTTAGCATTTTTG
TCTACACCAGCACTCTGTCTGGAAGAAAAACTGAAGGAACTACAAGATAAACTAGAGATG
ATGAATAGGGAGCAACCACAAGACCATGATGAACTGTGA

Peptide Sequence

PEP ID

PGSC0003DMP400008210
PEP Infomation

pacid=37448908 transcript=PGSC0003DMT400011814 locus=PGSC0003DMG400004640 ID=PGSC0003DMT400011814.v4.03 annot-version=v4.03
Sequence

MELRFQFVFLLSCIFCICSIDRSVSLPSIVNLGIAPEDENYYKGLSSGAINCKDGSKKFT
KAQLNDDFCDCPDGSDEPGTSACPSGKFYCKNAGHAPLFIYSSRVNDGICDCCDGSDEHD
GKVKCPNTCWEVGRVARDKLKKKIATFQEGIIIRKKEIEEAKLAIAKEETEVSKLKNEQK
ILKGRVEQLQDKKEQIEKVEEEERLKREKEEKERKEADDAKLEASKVEEKTEVHEEAVKS
DIHDKIGLLEDSPPVKDVVEGHDKAADEEQHGDHSVKDEFPVDEVEQVPEDSSQHPEIKE
ASTNNNKADVSSRNEEKDAAENIESLSKEELGRVIGSRWLGKKSEQETESVEAGTDSNHD
NHDEVPSDTHEEEYHGYDSDVDDRKYDDEHKYDDDENKYDDDDNEDHVEDSVGEDHDSSS
SYKSESDDDSDFADTTTTTSPSWTEKIQQTVKRIFRSVNLFQTPVNISDANCIRKEYDEA
SAKLTKIESRLSSLKQKLKHDFGPEKEFYSFHGQCFESKENKYTYKICPFKEATQVEGYS
TTRLGNWDKFEDSYRTMQFTNGDHCWNGPNRSVKVKLRCGLKNEVTDIDEPSRCEYLAFL
STPALCLEEKLKELQDKLEMMNREQPQDHDEL*

Transcript Sequence

Transcript ID

PGSC0003DMT400011814
Transcript Infomation

pacid=37448908 locus=PGSC0003DMG400004640 ID=PGSC0003DMT400011814.v4.03 annot-version=v4.03
Sequence

ATGGAATTACGATTTCAATTCGTGTTTTTACTCTCTTGTATCTTCTGCATATGTTCAATC
GATAGATCTGTATCTCTTCCTTCCATAGTCAACCTCGGAATTGCCCCGGAAGATGAGAAT
TATTACAAGGGTTTATCATCTGGTGCTATAAATTGTAAAGATGGGTCGAAGAAATTCACC
AAGGCTCAGCTCAATGATGATTTTTGTGACTGTCCAGATGGGTCTGATGAGCCAGGAACT
TCGGCATGTCCCAGCGGGAAGTTTTATTGCAAAAATGCAGGGCATGCTCCTCTCTTCATA
TACTCATCTAGGGTGAATGATGGCATTTGCGATTGTTGCGATGGGAGTGATGAGCATGAT
GGTAAAGTTAAGTGCCCAAATACATGTTGGGAGGTCGGCAGAGTAGCTAGAGATAAATTG
AAGAAAAAAATTGCAACATTTCAGGAAGGTATAATTATAAGGAAGAAGGAGATTGAAGAA
GCTAAACTTGCAATAGCAAAAGAGGAAACTGAAGTCTCTAAGCTGAAAAATGAGCAGAAG
ATACTTAAAGGGAGGGTTGAGCAGCTTCAGGACAAAAAAGAACAAATAGAGAAGGTTGAG
GAGGAAGAACGGTTAAAGAGAGAAAAGGAAGAGAAGGAACGAAAGGAAGCTGATGATGCT
AAGCTTGAGGCAAGCAAAGTTGAGGAGAAAACTGAAGTTCATGAAGAAGCTGTGAAGAGT
GACATCCACGATAAGATTGGCCTCCTGGAAGACTCTCCTCCCGTAAAGGATGTGGTAGAA
GGCCATGACAAAGCTGCAGATGAAGAACAACATGGTGACCATTCCGTGAAGGATGAGTTT
CCGGTTGATGAGGTAGAGCAGGTGCCCGAGGATTCTTCCCAGCATCCTGAAATAAAAGAG
GCGTCCACCAACAACAATAAAGCTGATGTTAGTAGTAGAAATGAGGAGAAAGATGCTGCT
GAAAATATTGAGTCACTGTCAAAGGAAGAGTTAGGACGTGTTATTGGTTCTCGTTGGTTA
GGAAAAAAGAGTGAACAGGAAACTGAGTCAGTTGAGGCTGGTACAGATAGTAACCATGAT
AACCATGATGAGGTGCCATCTGATACCCATGAAGAGGAGTATCATGGATATGATTCTGAT
GTTGATGACCGCAAGTATGATGATGAACACAAGTATGACGATGATGAAAACAAGTATGAC
GATGATGACAATGAGGACCACGTTGAAGATTCTGTTGGAGAGGACCACGATTCAAGTTCT
TCATATAAGTCCGAGTCTGATGATGATTCTGATTTTGCAGATACTACCACCACAACTAGT
CCTTCCTGGACGGAGAAGATACAACAAACTGTAAAGAGAATTTTTCGGTCTGTCAATTTG
TTCCAAACTCCAGTGAACATTTCTGATGCTAATTGCATACGCAAAGAGTACGATGAGGCA
AGTGCTAAGTTGACAAAAATTGAATCAAGGCTATCCAGCTTGAAGCAAAAGTTGAAACAT
GATTTTGGACCGGAGAAGGAATTCTATTCATTCCATGGACAATGTTTCGAGAGCAAGGAG
AACAAGTACACATACAAGATTTGCCCTTTCAAAGAAGCTACCCAAGTTGAGGGCTACAGC
ACAACTCGTTTGGGGAACTGGGATAAATTTGAGGATTCCTACAGAACTATGCAATTTACA
AACGGCGACCATTGCTGGAATGGCCCAAATAGAAGTGTAAAGGTAAAATTAAGGTGTGGT
TTGAAAAATGAGGTAACTGATATAGATGAACCGAGCCGCTGCGAATATTTAGCATTTTTG
TCTACACCAGCACTCTGTCTGGAAGAAAAACTGAAGGAACTACAAGATAAACTAGAGATG
ATGAATAGGGAGCAACCACAAGACCATGATGAACTGTGA