Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400011793
CDS Infomation

pacid=37449630 polypeptide=PGSC0003DMP400008193 locus=PGSC0003DMG400004631 ID=PGSC0003DMT400011793.v4.03 annot-version=v4.03
Sequence

ATGGTAATGGAAGGGATTCAAGAAGATATAGGTGATGGGAATATGCAATGTATGAATCAT
CCTTATAAGAACAGTTCCCCAGGTGGGATCTGTGCTTTGTGCCTTCAAGAAAAACTTGGA
AAGTTGGTTTCTTCCTCTTTTTCTTCTTCCATTTTCCCTTCTTCTTCTTCTTCCTCTAGT
TCAAGATCTGATTTTGTAGCCACTTCTTCCACTACTACAACTTCAACCCTACAAGCCCCA
ACAACTAACAAAAATACCACTGATTGTGTTAACTATCATCCTTATGAAAACAATATTAGG
AAATCAAAAATGCATTTTTTGAATAAGGGTAGTAATAGTAATGTTAATGTTAATATGGCA
AGTTCTGGTTCAGATTCTGGCATTGTTTTTAAGAGAAGTAAGTCAACTACAACCCCAAGA
AATCATTTGCATTTCTTGGAAGCTAATGAAAGAGAAGATTATGGTCCTCACAGAAAAGGG
TTCTGGTCTTTTCTTCATTACTCATCCTCAAAGCATTATTCTTCCACAGGATCATCTATG
AACAGTTCTAAAACATCAAGGGAGAAGAAGAAAGAAGAGATTGTTGTAGTGGAAGAGAAT
GAGAGTCCTAATGAGACTTCATTTAACAATAAAGTAGCAAGATCAAGATCTGTTGGTTGT
GGAAGTAGGAGTTTTTCAGGTGATTTATTTGAAAAAATCTCGACAGGTTTTGGAGATTGC
ACATTAAGAAGAATCGAGTCACAAAGAGAAAGCAAACCAAGATTTTCATCTGTTCATCAT
AAAGAAAGAGTTAACTGTGGTGGCATATTATCATATTTGGTTTCTTCTGAAGTAAATAAT
CTGAATGGAAAATCACATCATATTGCTAATGGAAGAAGTAAGAATTGGGGATGGGCCTTA
GCAAGTCCAATGAGAGCTTTTAGCAAAACATCATCAAGTGTGAAAAGAGAAGATTCAAAT
GATAACAAGAATGCTACTCCAAACTTGGCTGCAATTCCTTCCTTGTTGACAGTTAGCAGC
TAG

Peptide Sequence

PEP ID

PGSC0003DMP400008193
PEP Infomation

pacid=37449630 transcript=PGSC0003DMT400011793 locus=PGSC0003DMG400004631 ID=PGSC0003DMT400011793.v4.03 annot-version=v4.03
Sequence

MVMEGIQEDIGDGNMQCMNHPYKNSSPGGICALCLQEKLGKLVSSSFSSSIFPSSSSSSS
SRSDFVATSSTTTTSTLQAPTTNKNTTDCVNYHPYENNIRKSKMHFLNKGSNSNVNVNMA
SSGSDSGIVFKRSKSTTTPRNHLHFLEANEREDYGPHRKGFWSFLHYSSSKHYSSTGSSM
NSSKTSREKKKEEIVVVEENESPNETSFNNKVARSRSVGCGSRSFSGDLFEKISTGFGDC
TLRRIESQRESKPRFSSVHHKERVNCGGILSYLVSSEVNNLNGKSHHIANGRSKNWGWAL
ASPMRAFSKTSSSVKREDSNDNKNATPNLAAIPSLLTVSS*

Transcript Sequence

Transcript ID

PGSC0003DMT400011793
Transcript Infomation

pacid=37449630 locus=PGSC0003DMG400004631 ID=PGSC0003DMT400011793.v4.03 annot-version=v4.03
Sequence

ATGGTAATGGAAGGGATTCAAGAAGATATAGGTGATGGGAATATGCAATGTATGAATCAT
CCTTATAAGAACAGTTCCCCAGGTGGGATCTGTGCTTTGTGCCTTCAAGAAAAACTTGGA
AAGTTGGTTTCTTCCTCTTTTTCTTCTTCCATTTTCCCTTCTTCTTCTTCTTCCTCTAGT
TCAAGATCTGATTTTGTAGCCACTTCTTCCACTACTACAACTTCAACCCTACAAGCCCCA
ACAACTAACAAAAATACCACTGATTGTGTTAACTATCATCCTTATGAAAACAATATTAGG
AAATCAAAAATGCATTTTTTGAATAAGGGTAGTAATAGTAATGTTAATGTTAATATGGCA
AGTTCTGGTTCAGATTCTGGCATTGTTTTTAAGAGAAGTAAGTCAACTACAACCCCAAGA
AATCATTTGCATTTCTTGGAAGCTAATGAAAGAGAAGATTATGGTCCTCACAGAAAAGGG
TTCTGGTCTTTTCTTCATTACTCATCCTCAAAGCATTATTCTTCCACAGGATCATCTATG
AACAGTTCTAAAACATCAAGGGAGAAGAAGAAAGAAGAGATTGTTGTAGTGGAAGAGAAT
GAGAGTCCTAATGAGACTTCATTTAACAATAAAGTAGCAAGATCAAGATCTGTTGGTTGT
GGAAGTAGGAGTTTTTCAGGTGATTTATTTGAAAAAATCTCGACAGGTTTTGGAGATTGC
ACATTAAGAAGAATCGAGTCACAAAGAGAAAGCAAACCAAGATTTTCATCTGTTCATCAT
AAAGAAAGAGTTAACTGTGGTGGCATATTATCATATTTGGTTTCTTCTGAAGTAAATAAT
CTGAATGGAAAATCACATCATATTGCTAATGGAAGAAGTAAGAATTGGGGATGGGCCTTA
GCAAGTCCAATGAGAGCTTTTAGCAAAACATCATCAAGTGTGAAAAGAGAAGATTCAAAT
GATAACAAGAATGCTACTCCAAACTTGGCTGCAATTCCTTCCTTGTTGACAGTTAGCAGC
TAG