Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400011792
CDS Infomation

pacid=37446171 polypeptide=PGSC0003DMP400008192 locus=PGSC0003DMG400004630 ID=PGSC0003DMT400011792.v4.03 annot-version=v4.03
Sequence

ATGAGCAAGAGTAGCAATCCAAAAGGAAGAACTACGATTGAAGTTGGAGCTGATGGAGTT
GCCGTCATTACAATTATCAATCCTCCTGTCAATTCTCTCGCATTAGATGTGCTGTATAGC
TTGAAAGAGAACTACGATCAGGCCTTAAGAAGGGATGATGTGAAAGCGATTGTTGTGACA
GGCGCAAATGGCAGGTTCTCTGGTGGTTTCGATATCGGTGCCTTCGGTAAACTGCAGGGA
GGAACAGTCGAATCACCAAAGCCTGGTTTTATATCAGTGGAGATTCTCACTGACACCGTT
GAAGCTGCAAGAAAACCTTCTGTGGCGGCAATTGATGGTCTGGCTCTAGGTGGAGGACTA
GAAGTTGCAATGGCTTGTCATGCACGAATTTCTACTCCCAATGCACAACTTGGATTGCCA
GAACTTCAACTTGGTATACTTCCAGGGTTTGGAGGTACTCAGCGCCTCCCCCGCCTCGTA
GGTCTTGCCAAGTCCCTTGAAATGATGCTAACATCAAAGCCTGTTAAAGGAGAGGAAGCT
GTTAATCTGGGCCTTGTTGATGCTGTAGTTCCATCAAACCAATTATTGGATACTGCTCGT
AAGTGGGCTCTTGATATTTTGGAGTGCAGAAAACCTTGGGTTGCCAGTCTTCACAAAACT
GACAAGATAGAGCCTCTTGGTGAGGCTAGGGAAATATTAAAGTTTGCAAGAGTTCAAACG
CGCAGACAGGCTCCAAACCTCCAGCATCCCTTAGTTGTCATTGATGTTGTTGAAGAGGGT
ATAGTGTCTGGCCCACGTGCTGGGCTTTGGAAGGAGGCTGAAGCATTCCAAAGTCTTCTA
CATTCCGACACCTGCAAGGCCTTGGTCAACGTTTTCTTTGCTCAGCGTGCAACCACAAAG
GTTCCAGGGGTGACTGACTTGGGATTAAAACCGCGACGCATAAAAAAGGTCGCAATTCTT
GGAGGAGGTTTAATGGGTTCTGGAATTGCGACTGCACTGCTTCTTAGTAACTACCCAGTG
ATCTTGAAAGAAGTTAATGACAAATTCCTACAGGCTGGGTTGGGTAGAGTAAAAGCCAAT
TTGCAAAGTAGTGTCAAGAAAGGGAAAATGAGTCAAGAGAAGTTTGAAAAAACTCTCTCC
CTACTCAAGGGTGCTCTGGATTATGAAGATTTTAGAGATGTGGATATGGTCATTGAGGCT
GTCATCGAGAATGTATCTCTAAAGCAGCAAATATTTGCAGATCTTGAGAAGTATTGCCCT
CCACATTGCATTCTAGGAAGTAACACTTCTACGATTGACTTGAATTTGATTGGGGAAAAG
ACCAAATCTCAAGATCGTATTATTGGAGCTCACTTTTTCAGTCCGGCTCATGTGATGCCA
TTGTTGGAAATCGTCCGCACCCAAAAGACATCGCCCCAAGTAATTGTAGACTTGCTTGAT
GTTGGCAAGAAGATAAGGAAAACACCTGTAGTAGTGGGGAACTGCACCGGTTTTGCTGTC
AACAGAATGTTCTTTCCTTACACCCAAGCTGCTCTTTTGCTTGTTGAACGTGGAGCAGAC
GTCTTTCGCATAGATAGGGTCATTACGAAATTTGGCATGCCAATGGGCCCCTTCAGATTA
TGTGATCTTGTTGGTTTTGGTGTTGCAATTGCCACTGGTGGGCAATTTGTGATGAATTTC
CCGGAGAGAACTTACAAATCAATGTTGATACCGCTCATGCAAGAAGATAAAAGAGCTGGT
GAAACTACTAGGAAAGGGTTTTATGTGTATGATGACAGACGTAAAGCAAGCCCAGATCCA
GAAATAAAGAAATATATTGAGAAGGCAAGAGAGATGTCTGGTGTTACCATTGACCCTAAG
ATGGCAAAACTCTCGGACAAGGATATCATAGAGATGATTTTCTTCCCTGTGGTAAATGAG
GCCTGCAGAGTGCTTGCAGAAGGCATAGCAGTCAAATCTTCAGATCTTGACATTTCTGCT
ATTATGGGCATGGGATTCACTCCTTACAGAGGAGGGATCATATTCTGGGCAGACACTCTT
GGATCCAAATACATCTATTCACGATTGGATGAGTGGTCAAGAATGTATGGAGACTTTTTC
AAGCCTTGTTCCTACCTAGCTGAAAGAGCTTCCAAGGGGGCTCCTCTGAGTGCTACAACA
GATTCAGCCAAGTCGCGCTTGTAA

Peptide Sequence

PEP ID

PGSC0003DMP400008192
PEP Infomation

pacid=37446171 transcript=PGSC0003DMT400011792 locus=PGSC0003DMG400004630 ID=PGSC0003DMT400011792.v4.03 annot-version=v4.03
Sequence

MSKSSNPKGRTTIEVGADGVAVITIINPPVNSLALDVLYSLKENYDQALRRDDVKAIVVT
GANGRFSGGFDIGAFGKLQGGTVESPKPGFISVEILTDTVEAARKPSVAAIDGLALGGGL
EVAMACHARISTPNAQLGLPELQLGILPGFGGTQRLPRLVGLAKSLEMMLTSKPVKGEEA
VNLGLVDAVVPSNQLLDTARKWALDILECRKPWVASLHKTDKIEPLGEAREILKFARVQT
RRQAPNLQHPLVVIDVVEEGIVSGPRAGLWKEAEAFQSLLHSDTCKALVNVFFAQRATTK
VPGVTDLGLKPRRIKKVAILGGGLMGSGIATALLLSNYPVILKEVNDKFLQAGLGRVKAN
LQSSVKKGKMSQEKFEKTLSLLKGALDYEDFRDVDMVIEAVIENVSLKQQIFADLEKYCP
PHCILGSNTSTIDLNLIGEKTKSQDRIIGAHFFSPAHVMPLLEIVRTQKTSPQVIVDLLD
VGKKIRKTPVVVGNCTGFAVNRMFFPYTQAALLLVERGADVFRIDRVITKFGMPMGPFRL
CDLVGFGVAIATGGQFVMNFPERTYKSMLIPLMQEDKRAGETTRKGFYVYDDRRKASPDP
EIKKYIEKAREMSGVTIDPKMAKLSDKDIIEMIFFPVVNEACRVLAEGIAVKSSDLDISA
IMGMGFTPYRGGIIFWADTLGSKYIYSRLDEWSRMYGDFFKPCSYLAERASKGAPLSATT
DSAKSRL*

Transcript Sequence

Transcript ID

PGSC0003DMT400011792
Transcript Infomation

pacid=37446171 locus=PGSC0003DMG400004630 ID=PGSC0003DMT400011792.v4.03 annot-version=v4.03
Sequence

ATGAGCAAGAGTAGCAATCCAAAAGGAAGAACTACGATTGAAGTTGGAGCTGATGGAGTT
GCCGTCATTACAATTATCAATCCTCCTGTCAATTCTCTCGCATTAGATGTGCTGTATAGC
TTGAAAGAGAACTACGATCAGGCCTTAAGAAGGGATGATGTGAAAGCGATTGTTGTGACA
GGCGCAAATGGCAGGTTCTCTGGTGGTTTCGATATCGGTGCCTTCGGTAAACTGCAGGGA
GGAACAGTCGAATCACCAAAGCCTGGTTTTATATCAGTGGAGATTCTCACTGACACCGTT
GAAGCTGCAAGAAAACCTTCTGTGGCGGCAATTGATGGTCTGGCTCTAGGTGGAGGACTA
GAAGTTGCAATGGCTTGTCATGCACGAATTTCTACTCCCAATGCACAACTTGGATTGCCA
GAACTTCAACTTGGTATACTTCCAGGGTTTGGAGGTACTCAGCGCCTCCCCCGCCTCGTA
GGTCTTGCCAAGTCCCTTGAAATGATGCTAACATCAAAGCCTGTTAAAGGAGAGGAAGCT
GTTAATCTGGGCCTTGTTGATGCTGTAGTTCCATCAAACCAATTATTGGATACTGCTCGT
AAGTGGGCTCTTGATATTTTGGAGTGCAGAAAACCTTGGGTTGCCAGTCTTCACAAAACT
GACAAGATAGAGCCTCTTGGTGAGGCTAGGGAAATATTAAAGTTTGCAAGAGTTCAAACG
CGCAGACAGGCTCCAAACCTCCAGCATCCCTTAGTTGTCATTGATGTTGTTGAAGAGGGT
ATAGTGTCTGGCCCACGTGCTGGGCTTTGGAAGGAGGCTGAAGCATTCCAAAGTCTTCTA
CATTCCGACACCTGCAAGGCCTTGGTCAACGTTTTCTTTGCTCAGCGTGCAACCACAAAG
GTTCCAGGGGTGACTGACTTGGGATTAAAACCGCGACGCATAAAAAAGGTCGCAATTCTT
GGAGGAGGTTTAATGGGTTCTGGAATTGCGACTGCACTGCTTCTTAGTAACTACCCAGTG
ATCTTGAAAGAAGTTAATGACAAATTCCTACAGGCTGGGTTGGGTAGAGTAAAAGCCAAT
TTGCAAAGTAGTGTCAAGAAAGGGAAAATGAGTCAAGAGAAGTTTGAAAAAACTCTCTCC
CTACTCAAGGGTGCTCTGGATTATGAAGATTTTAGAGATGTGGATATGGTCATTGAGGCT
GTCATCGAGAATGTATCTCTAAAGCAGCAAATATTTGCAGATCTTGAGAAGTATTGCCCT
CCACATTGCATTCTAGGAAGTAACACTTCTACGATTGACTTGAATTTGATTGGGGAAAAG
ACCAAATCTCAAGATCGTATTATTGGAGCTCACTTTTTCAGTCCGGCTCATGTGATGCCA
TTGTTGGAAATCGTCCGCACCCAAAAGACATCGCCCCAAGTAATTGTAGACTTGCTTGAT
GTTGGCAAGAAGATAAGGAAAACACCTGTAGTAGTGGGGAACTGCACCGGTTTTGCTGTC
AACAGAATGTTCTTTCCTTACACCCAAGCTGCTCTTTTGCTTGTTGAACGTGGAGCAGAC
GTCTTTCGCATAGATAGGGTCATTACGAAATTTGGCATGCCAATGGGCCCCTTCAGATTA
TGTGATCTTGTTGGTTTTGGTGTTGCAATTGCCACTGGTGGGCAATTTGTGATGAATTTC
CCGGAGAGAACTTACAAATCAATGTTGATACCGCTCATGCAAGAAGATAAAAGAGCTGGT
GAAACTACTAGGAAAGGGTTTTATGTGTATGATGACAGACGTAAAGCAAGCCCAGATCCA
GAAATAAAGAAATATATTGAGAAGGCAAGAGAGATGTCTGGTGTTACCATTGACCCTAAG
ATGGCAAAACTCTCGGACAAGGATATCATAGAGATGATTTTCTTCCCTGTGGTAAATGAG
GCCTGCAGAGTGCTTGCAGAAGGCATAGCAGTCAAATCTTCAGATCTTGACATTTCTGCT
ATTATGGGCATGGGATTCACTCCTTACAGAGGAGGGATCATATTCTGGGCAGACACTCTT
GGATCCAAATACATCTATTCACGATTGGATGAGTGGTCAAGAATGTATGGAGACTTTTTC
AAGCCTTGTTCCTACCTAGCTGAAAGAGCTTCCAAGGGGGCTCCTCTGAGTGCTACAACA
GATTCAGCCAAGTCGCGCTTGTAA