Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400011784
CDS Infomation

pacid=37446213 polypeptide=PGSC0003DMP400008186 locus=PGSC0003DMG400004628 ID=PGSC0003DMT400011784.v4.03 annot-version=v4.03
Sequence

ATGAATAACAGTCGAGAAGAAGCGAATCGCTCCGGCGCAGACGAGGAAAATGCGAAGTTT
CATACAGTTCAGCCACTTCGGGATTTGGAATCGAATTGGGGTGTTGATTTAGCTAAAAAT
CTTGAGGAGTATTTGCTCAAAATTTGCTCGGGTGAAATTACTAGTGAAAATTATGATGAT
GGGCATCACCTTTCTGTGAATTTTGCTGAAGCTGCTTTGCTGCTTCAGGGGTCAGTTCAG
GTTTACAGCAGGAAGGTGGAGTATCTGTATTCTCTTGTAGTGCATGCTTTGGAATTCATC
ACCAAGAAGAGTGAACCAGATCTACCAGCAAGTGGATCAGCCCAAGCAGATGAAAACGGT
TTGCCGGCTGCCAACCATGAAGAGGATGATCCATTCTGGGTTTCAGAGGAAATCCCAGTG
GAAGCAAAGAATATGTTGGATGATACGGTATGCAGGGATTCATTCACCCAGTTTGTGAAG
GCCCCTGCAAATCTGGTTGTGCTCGAGGGTGACTGCCTGGATGTTACTGGAGATGCTGGA
GAACTGGAGTCTTACTTGCTAGCCACATGTGATCTTTATCGAGATTTTATTCTATTGGAC
GCATGTGATTCAGTAACAGTGGATGGCTTTCTGGATAGTGAGAATATAGCTGGAAAGGGG
CTGAACAATAGTTCAAAGGGCAGTTCCCTAAAATCCAAATACCACAAAAGCTTTTCCTCT
CCCACAGGACTTTCTGGGGGAGCTGGCAATAAATCTTCAGCGCGAAAGAACCAGGATGCT
AATTTGTATCAGTCTCCGAGGGGTCATGAGTTTGATCCAGCTAATTTAAACAATGATCCA
CATGAGCTTGATCCAGGCAATTTAAACAATGATCCATTCTCATCTGATATACCTGATAAC
ATTGATGATGCACATGGATATTCAGAACCTAGAGATTTAGATGACTCAGATGATGAAGAC
CCATGGAAACCCTTGAACCCTCATGAACCAGGCAATTTGAAAGTAAAATCGTACAAAAAA
GTTAAATCTAATAGAAGGCAGGGTGTGGTATCCAGAAAACTTGCATCTTTGGCCACAGAA
TTTCCGCTTGCAAGATTACATGGTACCATTAATACCGACCTCAACGAGATGTGGGAGAGG
AGATGTTGTGCCATGAATAAGCAAGTCGACTCACAATCTCCACCACCATTTGAGAAGCTC
CGGGAATCACTTCTTCATGGGATGAACAACGACTACGATGATTTCTATACCCCAAATGAA
AAGAATGAAGATAATGACTATGATAGTGCTGATCACAATTTTGGGCCTCCTGATTTTGAC
ATGCCAGAAAATGCAGACATGAACAACAATGCTACTCCACATGGTGAAAAGCATGATAAT
TGTGGTCCACTTTTTGATAGTGAAGCTCATGAAGATCTGAATGGTCAAGAAAACCTTGAA
GATCTTTGTCGCTCCCACTTGGATTCTCTTCTTGCTAACCTTGCTGAAACTGAGAAGCAG
ACTGAATTGGCTGCTCGGGTTTCAACGTGGAAACAGAGAATTGACCAGAACTTGGAGGAA
CAAGAATCGCATCCGCCCTTTGACATTCATGAATATGGGGAAAGGGTTTTGAACAAGTTA
TCCCTGGAAGAAAATGATAAAAGCACCATGTCCTTTTCTGATGTTGTCAAGGGTTCGGAG
AAGCATGACATTGCTCGAACATTTTCTGCGCTTCTGCAATTGGTAAACAATGGAGACGTT
GCTTTGGAAAGAGGTGGGGTATGCGAGTCCACTTGTTACACAGCTGCAAATCCCTTCTCT
GTTCAACTCCTTAGGCATGGCAACGGTAGGGAGGAAATGCAGTTTCAATCATCAAAAAAG
AGAGTGAAATCTCCAATGCACAATCAGAACATTAGAAAGGAAAAGAACAAAGGTAAAGCC
GTTCATGCTGCTGTTGATTCATCGCCTTTAGGGCCCAATTCAGATAGCAGAGTTCCCCTG
AAGCTGGGAAAGGTTAATGGAACAAGATGCACACCTGAAAGCAAGAAAAGAAGGAAGTCC
AGAATAGCGTTAGCATCGGATGTGCCAACTGCATTGTAG

Peptide Sequence

PEP ID

PGSC0003DMP400008186
PEP Infomation

pacid=37446213 transcript=PGSC0003DMT400011784 locus=PGSC0003DMG400004628 ID=PGSC0003DMT400011784.v4.03 annot-version=v4.03
Sequence

MNNSREEANRSGADEENAKFHTVQPLRDLESNWGVDLAKNLEEYLLKICSGEITSENYDD
GHHLSVNFAEAALLLQGSVQVYSRKVEYLYSLVVHALEFITKKSEPDLPASGSAQADENG
LPAANHEEDDPFWVSEEIPVEAKNMLDDTVCRDSFTQFVKAPANLVVLEGDCLDVTGDAG
ELESYLLATCDLYRDFILLDACDSVTVDGFLDSENIAGKGLNNSSKGSSLKSKYHKSFSS
PTGLSGGAGNKSSARKNQDANLYQSPRGHEFDPANLNNDPHELDPGNLNNDPFSSDIPDN
IDDAHGYSEPRDLDDSDDEDPWKPLNPHEPGNLKVKSYKKVKSNRRQGVVSRKLASLATE
FPLARLHGTINTDLNEMWERRCCAMNKQVDSQSPPPFEKLRESLLHGMNNDYDDFYTPNE
KNEDNDYDSADHNFGPPDFDMPENADMNNNATPHGEKHDNCGPLFDSEAHEDLNGQENLE
DLCRSHLDSLLANLAETEKQTELAARVSTWKQRIDQNLEEQESHPPFDIHEYGERVLNKL
SLEENDKSTMSFSDVVKGSEKHDIARTFSALLQLVNNGDVALERGGVCESTCYTAANPFS
VQLLRHGNGREEMQFQSSKKRVKSPMHNQNIRKEKNKGKAVHAAVDSSPLGPNSDSRVPL
KLGKVNGTRCTPESKKRRKSRIALASDVPTAL*

Transcript Sequence

Transcript ID

PGSC0003DMT400011784
Transcript Infomation

pacid=37446213 locus=PGSC0003DMG400004628 ID=PGSC0003DMT400011784.v4.03 annot-version=v4.03
Sequence

ATGAATAACAGTCGAGAAGAAGCGAATCGCTCCGGCGCAGACGAGGAAAATGCGAAGTTT
CATACAGTTCAGCCACTTCGGGATTTGGAATCGAATTGGGGTGTTGATTTAGCTAAAAAT
CTTGAGGAGTATTTGCTCAAAATTTGCTCGGGTGAAATTACTAGTGAAAATTATGATGAT
GGGCATCACCTTTCTGTGAATTTTGCTGAAGCTGCTTTGCTGCTTCAGGGGTCAGTTCAG
GTTTACAGCAGGAAGGTGGAGTATCTGTATTCTCTTGTAGTGCATGCTTTGGAATTCATC
ACCAAGAAGAGTGAACCAGATCTACCAGCAAGTGGATCAGCCCAAGCAGATGAAAACGGT
TTGCCGGCTGCCAACCATGAAGAGGATGATCCATTCTGGGTTTCAGAGGAAATCCCAGTG
GAAGCAAAGAATATGTTGGATGATACGGTATGCAGGGATTCATTCACCCAGTTTGTGAAG
GCCCCTGCAAATCTGGTTGTGCTCGAGGGTGACTGCCTGGATGTTACTGGAGATGCTGGA
GAACTGGAGTCTTACTTGCTAGCCACATGTGATCTTTATCGAGATTTTATTCTATTGGAC
GCATGTGATTCAGTAACAGTGGATGGCTTTCTGGATAGTGAGAATATAGCTGGAAAGGGG
CTGAACAATAGTTCAAAGGGCAGTTCCCTAAAATCCAAATACCACAAAAGCTTTTCCTCT
CCCACAGGACTTTCTGGGGGAGCTGGCAATAAATCTTCAGCGCGAAAGAACCAGGATGCT
AATTTGTATCAGTCTCCGAGGGGTCATGAGTTTGATCCAGCTAATTTAAACAATGATCCA
CATGAGCTTGATCCAGGCAATTTAAACAATGATCCATTCTCATCTGATATACCTGATAAC
ATTGATGATGCACATGGATATTCAGAACCTAGAGATTTAGATGACTCAGATGATGAAGAC
CCATGGAAACCCTTGAACCCTCATGAACCAGGCAATTTGAAAGTAAAATCGTACAAAAAA
GTTAAATCTAATAGAAGGCAGGGTGTGGTATCCAGAAAACTTGCATCTTTGGCCACAGAA
TTTCCGCTTGCAAGATTACATGGTACCATTAATACCGACCTCAACGAGATGTGGGAGAGG
AGATGTTGTGCCATGAATAAGCAAGTCGACTCACAATCTCCACCACCATTTGAGAAGCTC
CGGGAATCACTTCTTCATGGGATGAACAACGACTACGATGATTTCTATACCCCAAATGAA
AAGAATGAAGATAATGACTATGATAGTGCTGATCACAATTTTGGGCCTCCTGATTTTGAC
ATGCCAGAAAATGCAGACATGAACAACAATGCTACTCCACATGGTGAAAAGCATGATAAT
TGTGGTCCACTTTTTGATAGTGAAGCTCATGAAGATCTGAATGGTCAAGAAAACCTTGAA
GATCTTTGTCGCTCCCACTTGGATTCTCTTCTTGCTAACCTTGCTGAAACTGAGAAGCAG
ACTGAATTGGCTGCTCGGGTTTCAACGTGGAAACAGAGAATTGACCAGAACTTGGAGGAA
CAAGAATCGCATCCGCCCTTTGACATTCATGAATATGGGGAAAGGGTTTTGAACAAGTTA
TCCCTGGAAGAAAATGATAAAAGCACCATGTCCTTTTCTGATGTTGTCAAGGGTTCGGAG
AAGCATGACATTGCTCGAACATTTTCTGCGCTTCTGCAATTGGTAAACAATGGAGACGTT
GCTTTGGAAAGAGGTGGGGTATGCGAGTCCACTTGTTACACAGCTGCAAATCCCTTCTCT
GTTCAACTCCTTAGGCATGGCAACGGTAGGGAGGAAATGCAGTTTCAATCATCAAAAAAG
AGAGTGAAATCTCCAATGCACAATCAGAACATTAGAAAGGAAAAGAACAAAGGTAAAGCC
GTTCATGCTGCTGTTGATTCATCGCCTTTAGGGCCCAATTCAGATAGCAGAGTTCCCCTG
AAGCTGGGAAAGGTTAATGGAACAAGATGCACACCTGAAAGCAAGAAAAGAAGGAAGTCC
AGAATAGCGTTAGCATCGGATGTGCCAACTGCATTGTAG