Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400011776
CDS Infomation

pacid=37445787 polypeptide=PGSC0003DMP400008179 locus=PGSC0003DMG400004623 ID=PGSC0003DMT400011776.v4.03 annot-version=v4.03
Sequence

ATGGCTCCGGAGAGAGATATTGATGATCATCCCAGGAACAAGGCGAATTACACGGCGTTA
ACTCCGTTATGGTTTTTAGAGAGGGCGGCGACTGTATTTCCAAATCGGAAATCGTTAATT
CACGGCTCCGTTGAGTACACGTGGCACCAGACTTACCGGCGTTGCCGTCAATTAGCCTCT
GCTTTAACCAAAAACTCCGTCACCTTTGGAAGCACGGTTGCAGTTATTGCCCCAAATGTC
CCGGCTATGTATGAAGCTCATTTCGGAATTCCAATGTCTGGAGCTGTTATAAATGCTGTG
AATGTTCGTCTAAATGCGCAAACAATTGCTTTTCTATTGGGACATTGTGCGGCTTCTATT
GTCATGGTGGATCAAGAGTATTTTCCGTTGGCTGAGGAAGCGTTGAAAGTATGGGAAAAT
AACAGTAAAGGAAACTTTAATGCTCCGCTTTTGATTGTAATTGCTGATAAAAACTGTGAT
CCAATGCCGGTTCAGTATGCTCTTGAGAAAGGGGCAATTGAATATGAGAAATTTGTAGAA
ACTGGTGATCCAGACTTTACGTGGAAGGCACCAGAGGATGAATGGCAAACCATTGCTTTG
GGATATACTTCAGGCACAACAGCTAGTCCTAAAGGAGTGGTGTTGCACCATCGTGGCGCT
TATATTATGGCTATGAGTAATGCGGTGGTTTGGAGTATGCCAGAGGGAGCTGTGTATCTG
TGGACTCTACCATTGTTTCATTGTAATGGTTGGTGTTTCGTTTGGACACTTGCTACGATT
TGTGGGACTAACATATGTCTTAGACAGGTAACCGCTAAGGCTGTTTATTCAGCCATAGCG
CATCTTGGTGTGACTCATTTTTCTGCTGCACCGGTGGTACTCAACACCATAGTTAACGCC
CCAAAAGAGGAGACTATCCTTCCTCTGCCTCGTCTTGTGCACGTAAGCACAGCTGGTGCT
TCTCCTCCTCCATCTGTACTTGCTGCAATGTCACAACGTGGTTTCCGTGTCTTACACACT
TATGGCCTTTCTGAAACCTATGGTCCATCCACTCTATGCACATGGAAGCCCGAGTGGGAT
TTACTTCCTCTAGACATCCAAGCACGTCTACAAGCACGCCAAGGTGTCAGATACGTTGGT
CTGGAGCATTTAGACGTTGTCAGTACAAACGACATGAAATCTGTTCCAGCAGATGGAAAA
ACAATAGGGGAGATTGTCTTCAGAGGTAATATTGTGATGAAAGGTTACCTTAAGAATCCG
AAAGCTAACGAGGAAGCTTTTGCTGGAGGGTGGTATCATTCGGGTGATCTTGCAGTTAAA
CATCCCGACGGATACATAGAAATCAAAGACAGATCAAAGGACATCATCATTTCTGGAGGT
GAAAACATAAGTAGTGTAGAAGTTGAGAATATCCTCTACTTACATCCTGCAATACTCGAG
GTCTCTGTAGTTGCAAGGCCCGATGAGCAATGGGGTGAGTCACCATGTGCATTCGTGACG
TTGAAGCCTGATTTGAAGGAGACAGATCAACGAAAGTTGGCTGACGATATCATCAACTTC
AGTCGATCGAAAATGCCTAAGTTTTGGGTTCCAAAATCAGTTGTGTTTGGACCATTGCCA
AAGACTGCTACTGGGAAAATACAAAAGCATGTGTTGAGGGCAAAGGCAAAGGAAATGGGA
CCAATGAAGAAGAGTAGATTATAA

Peptide Sequence

PEP ID

PGSC0003DMP400008179
PEP Infomation

pacid=37445787 transcript=PGSC0003DMT400011776 locus=PGSC0003DMG400004623 ID=PGSC0003DMT400011776.v4.03 annot-version=v4.03
Sequence

MAPERDIDDHPRNKANYTALTPLWFLERAATVFPNRKSLIHGSVEYTWHQTYRRCRQLAS
ALTKNSVTFGSTVAVIAPNVPAMYEAHFGIPMSGAVINAVNVRLNAQTIAFLLGHCAASI
VMVDQEYFPLAEEALKVWENNSKGNFNAPLLIVIADKNCDPMPVQYALEKGAIEYEKFVE
TGDPDFTWKAPEDEWQTIALGYTSGTTASPKGVVLHHRGAYIMAMSNAVVWSMPEGAVYL
WTLPLFHCNGWCFVWTLATICGTNICLRQVTAKAVYSAIAHLGVTHFSAAPVVLNTIVNA
PKEETILPLPRLVHVSTAGASPPPSVLAAMSQRGFRVLHTYGLSETYGPSTLCTWKPEWD
LLPLDIQARLQARQGVRYVGLEHLDVVSTNDMKSVPADGKTIGEIVFRGNIVMKGYLKNP
KANEEAFAGGWYHSGDLAVKHPDGYIEIKDRSKDIIISGGENISSVEVENILYLHPAILE
VSVVARPDEQWGESPCAFVTLKPDLKETDQRKLADDIINFSRSKMPKFWVPKSVVFGPLP
KTATGKIQKHVLRAKAKEMGPMKKSRL*

Transcript Sequence

Transcript ID

PGSC0003DMT400011776
Transcript Infomation

pacid=37445787 locus=PGSC0003DMG400004623 ID=PGSC0003DMT400011776.v4.03 annot-version=v4.03
Sequence

ATGGCTCCGGAGAGAGATATTGATGATCATCCCAGGAACAAGGCGAATTACACGGCGTTA
ACTCCGTTATGGTTTTTAGAGAGGGCGGCGACTGTATTTCCAAATCGGAAATCGTTAATT
CACGGCTCCGTTGAGTACACGTGGCACCAGACTTACCGGCGTTGCCGTCAATTAGCCTCT
GCTTTAACCAAAAACTCCGTCACCTTTGGAAGCACGGTTGCAGTTATTGCCCCAAATGTC
CCGGCTATGTATGAAGCTCATTTCGGAATTCCAATGTCTGGAGCTGTTATAAATGCTGTG
AATGTTCGTCTAAATGCGCAAACAATTGCTTTTCTATTGGGACATTGTGCGGCTTCTATT
GTCATGGTGGATCAAGAGTATTTTCCGTTGGCTGAGGAAGCGTTGAAAGTATGGGAAAAT
AACAGTAAAGGAAACTTTAATGCTCCGCTTTTGATTGTAATTGCTGATAAAAACTGTGAT
CCAATGCCGGTTCAGTATGCTCTTGAGAAAGGGGCAATTGAATATGAGAAATTTGTAGAA
ACTGGTGATCCAGACTTTACGTGGAAGGCACCAGAGGATGAATGGCAAACCATTGCTTTG
GGATATACTTCAGGCACAACAGCTAGTCCTAAAGGAGTGGTGTTGCACCATCGTGGCGCT
TATATTATGGCTATGAGTAATGCGGTGGTTTGGAGTATGCCAGAGGGAGCTGTGTATCTG
TGGACTCTACCATTGTTTCATTGTAATGGTTGGTGTTTCGTTTGGACACTTGCTACGATT
TGTGGGACTAACATATGTCTTAGACAGGTAACCGCTAAGGCTGTTTATTCAGCCATAGCG
CATCTTGGTGTGACTCATTTTTCTGCTGCACCGGTGGTACTCAACACCATAGTTAACGCC
CCAAAAGAGGAGACTATCCTTCCTCTGCCTCGTCTTGTGCACGTAAGCACAGCTGGTGCT
TCTCCTCCTCCATCTGTACTTGCTGCAATGTCACAACGTGGTTTCCGTGTCTTACACACT
TATGGCCTTTCTGAAACCTATGGTCCATCCACTCTATGCACATGGAAGCCCGAGTGGGAT
TTACTTCCTCTAGACATCCAAGCACGTCTACAAGCACGCCAAGGTGTCAGATACGTTGGT
CTGGAGCATTTAGACGTTGTCAGTACAAACGACATGAAATCTGTTCCAGCAGATGGAAAA
ACAATAGGGGAGATTGTCTTCAGAGGTAATATTGTGATGAAAGGTTACCTTAAGAATCCG
AAAGCTAACGAGGAAGCTTTTGCTGGAGGGTGGTATCATTCGGGTGATCTTGCAGTTAAA
CATCCCGACGGATACATAGAAATCAAAGACAGATCAAAGGACATCATCATTTCTGGAGGT
GAAAACATAAGTAGTGTAGAAGTTGAGAATATCCTCTACTTACATCCTGCAATACTCGAG
GTCTCTGTAGTTGCAAGGCCCGATGAGCAATGGGGTGAGTCACCATGTGCATTCGTGACG
TTGAAGCCTGATTTGAAGGAGACAGATCAACGAAAGTTGGCTGACGATATCATCAACTTC
AGTCGATCGAAAATGCCTAAGTTTTGGGTTCCAAAATCAGTTGTGTTTGGACCATTGCCA
AAGACTGCTACTGGGAAAATACAAAAGCATGTGTTGAGGGCAAAGGCAAAGGAAATGGGA
CCAATGAAGAAGAGTAGATTATAA