Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400011772
CDS Infomation

pacid=37445671 polypeptide=PGSC0003DMP400008176 locus=PGSC0003DMG400004621 ID=PGSC0003DMT400011772.v4.03 annot-version=v4.03
Sequence

ATGGTGAACGTCGCCGGCGACGACGATGATGATTTCGGTGATATCTACGCCGACGTATTA
GTTCAAGCAAGTTCAGCTATCAATGCTCTACAGAGTTCAACGAAGGTTCAAACGGAAGTT
AATGAGGTTAACTACAATGCTGCTGTCGGAAACTGTAATCGTGAAAATGCTGTAAGAGGA
GAAGAGGAATGTGAGAGCGAGAGTGGAGATGACTTGAACATACTGTTGAATGATGATGAA
GGTGATGATAATTTTCTCAATGCTGGATGTGATGAGGATGAAACTGAGGGAAATGGAGGT
TTTAGTGTTAGTGATAAAGGAAATGGTTTAGGACAGAATTCAAATGGCAGCGGAAGTGGC
GATGGAGAGAAAAACAGTTACAAGAACACAAGACCACCACAAGCAGCATACTCAAGTCAT
CTCAAAGCCAATAGATCTTCTTGTGCGCCTTCTTACTCTACAGCATTTGTCAAGGGCAAA
TGGGAGGATAATAGCTACACACAAAGGGTGGGCTCAGGCTTTGCTGCTCAAAATGGACAG
AGCTTCTCACTTCCTCGGTCGAGGAATATATTGGACGTGAATATTGATATGTTTGAGAAG
AAACCTTGGCGGTATCCAGGCACTGACTTGACAGATTATTTTAATTTTGGCTTTGATGAA
GATAGTTGGAAACAGTATTGCAACTGCCTGGATGAGCACCGAGATCAAGCAAAAAAGATA
GTCAAAGATTCAGACTACAAGACTTCGAAAATTAGTAAGCCAAAAGGTAGAGAAATAGAG
GTGGAAGAGAGCATGATTGAGCGCCGACCATCAACAGATGTGGGACGTCCACAGTATCGG
GATTCTGGTGTCGTCATACAGATTGCTTTGCAGCAGTCAATGGAAGATCCCATAAGTTCT
ACAAAAGAGCAGCGGGAAGCATCTGAGAATGGAGATGTTGTTGGGGGAGATAGAAAGGAG
TTTCTCTGTTTCAGTAGTGCCAGCGAAGATGAGTTAACCAGCTTGGAAGGAATTGGAGAA
GGATCAGGCAAGTCTACATCTGGAAGGATTACACCTGTTTGTGAGCACGTGTCTATGGGT
TCAGATAACTACGGAAATTCTGAGTTCTCTGATGCAGATGAGCGACACCACCAAGAGGGG
ACCTACTGTAATGTTGATCAAACCTCAGGAGCAATTAGATCTTCTCATGATGCAAATAAA
AGCAGTGAGAGAGACATATCTGATCCAAGACAACCTATAAAGTTGCAAGAACCACTGCAT
GGTGGAGGCAGAGAGCATAGCCCAGGTTCATCTTGTTGTTCTCTAAGTCATGGTGGCACA
TCTGGAGATGGGACTTTTCTTGACTTAGAGAAATCTCATGATCATCATACAAGGTTATTA
TCAAACACAGAATCTGAGTTACGGGAGAAGGGTACAATTGATTACCAGCCAATTTATGGA
ACCAATCATAACAGAACAAAGTCTGGTGATCCTAAATATTTTACACGAGGTAGAAGGTCT
GTGCAAAGAGAACTGCTGCATGACAGAAGAAGACCTGGTCGAATGAGTGGAACAATTCCT
GCTCACCTGAAAGATGAGGATTCCCACAAATCAGATGCTAGGATACTGTATGAAAGGCGT
AATTCAACTGTGATCCGATACAGACAGAGAGATAGACGATATGCTTTTGACTCTCATGAA
AGGGAAGATACTTCACATTTTAAGAGGGCAGAACCCGTTTACTCTAATGCAGGACGATTT
TCTGATTATCCATGCCGGGATTCTTTTACAAAAAATCCTGAGATGGAACATCAGTTAAGA
TGTAAATATGACAAAAACTGGTCTGGCGGTCGAAGCGTGAAAAGAAAGCTAGATCCTCTT
GAACTATCAATTTATACAGATGATGAATTGTTGGAAAGAGATAGACCCCATTATGGGAGA
AGACTCACTGTTCAGGATATGGACACCGTTCCTTTTCATGAATCGGAACAATGGTTCGAT
AAGTATATTTCCTATTCAGATGATGAGAATCCCAGTCAACGAATGCGGAAAATAGATCAG
CTGCCGAGTAAGAAGAGAGTGAGGACTGATGATCTTGTAACTGAATGTAATTACATCTAC
GATATCATGGAAGAGACTGATAACAGATATAGACCATACAACCACAGGGATACTAATATT
CTAGAAGATGGCTATCATGTAAATTTGACTTATTTCAGAAGAGAAATTAAAAGCCCCAGT
AGGGGCAAAAGGAGAGATGTCAGTCCTTGCAAAAGTTCAAATGATATATGTTTCATGGAT
CTAAAGGATGAGGAAGGGAGATTTGATGGGTATCGACCTCCATCCTTTCGTTTGTATAGA
GAATCTTGTACTTCTAGCAGAAGGTGGCAGAGCCCTGAACTGCCACGTGGCAGACACGGA
ATATTCAGTGGGACTAGGAAATGTGATGGTGGTGCTAATTTGACCAACTCCATTGGTTCC
GATCAGACGAGCAAGTATCCTGGTAATCAGGACAATTTTAAAAGAAGAAGAGGGGGCCAG
CAGTCTGAAGGGATGCAATGGGTTGAAGATGAAAACAGTTCTAGGTATCAGCAAAATATA
TTCGATGCTGAGAGGACGTCATATTCGTTCAGAAGAAGTTCAAGTGACCGAAGGTTTAAT
TCATTTGACAATAATCATGGACCCAACCCAGTAGAAAAGCTTTTAGATGATAGGCATGTG
GAGCAGGAAAAATACAAATTGATCAGGGAAGGCAATAATGCCAGTCAATTTGGTCAAGGG
TCTAAAGTTTTTCATAAAGATAATCATTGGAGGAGATTCCCAAGAGGGAGAGATTCTGTT
GACACGGGCTTGATTGTTGAGAACGGAGAGTCCTCCGGAAGATGCTCCAAAGCAGGGGGT
GTAACATCCTTTGACAGGTATAGCCACTTGGATTCAGATAGTTATGTGGAGCTGAAGCCC
ATCGATGGAACTAGCAAACCCCATTTCAGGAAGACACTCAGAACTCGAAATGTGACGACT
GATCCTAAAGAAAATGATAAAGGAAGGCTTGATATATTCTCAGATGCCAACCAGGAAGAG
TCTCTGGATATTGAAGAAGGTCAGATAATTGAAGAAATGAACGAGAAAATCATTAAAAAG
AGAATCACATGTTCTGGCAAATCACAAATCAGTGAAATGAAGAATTTCGCGTATGATAAA
AATGTGGAGGGACAGGACAACAACCCTAGGATTTTGGAGATCATGGCAAAGATGGAAAAG
CGTGGAGAGCGTTTCAAGCAGCCTATTGCTCTCAAAAGTGATACAAAGAATGTCTCTAAG
CCTTTGGTTGATTCGTTTGCTTTGTCAACTGAACCTATGCAACCAAGACCAGCACGAAAG
AGGAGATGGGCTGCAAGCAAGGCAACTGTTTAA

Peptide Sequence

PEP ID

PGSC0003DMP400008176
PEP Infomation

pacid=37445671 transcript=PGSC0003DMT400011772 locus=PGSC0003DMG400004621 ID=PGSC0003DMT400011772.v4.03 annot-version=v4.03
Sequence

MVNVAGDDDDDFGDIYADVLVQASSAINALQSSTKVQTEVNEVNYNAAVGNCNRENAVRG
EEECESESGDDLNILLNDDEGDDNFLNAGCDEDETEGNGGFSVSDKGNGLGQNSNGSGSG
DGEKNSYKNTRPPQAAYSSHLKANRSSCAPSYSTAFVKGKWEDNSYTQRVGSGFAAQNGQ
SFSLPRSRNILDVNIDMFEKKPWRYPGTDLTDYFNFGFDEDSWKQYCNCLDEHRDQAKKI
VKDSDYKTSKISKPKGREIEVEESMIERRPSTDVGRPQYRDSGVVIQIALQQSMEDPISS
TKEQREASENGDVVGGDRKEFLCFSSASEDELTSLEGIGEGSGKSTSGRITPVCEHVSMG
SDNYGNSEFSDADERHHQEGTYCNVDQTSGAIRSSHDANKSSERDISDPRQPIKLQEPLH
GGGREHSPGSSCCSLSHGGTSGDGTFLDLEKSHDHHTRLLSNTESELREKGTIDYQPIYG
TNHNRTKSGDPKYFTRGRRSVQRELLHDRRRPGRMSGTIPAHLKDEDSHKSDARILYERR
NSTVIRYRQRDRRYAFDSHEREDTSHFKRAEPVYSNAGRFSDYPCRDSFTKNPEMEHQLR
CKYDKNWSGGRSVKRKLDPLELSIYTDDELLERDRPHYGRRLTVQDMDTVPFHESEQWFD
KYISYSDDENPSQRMRKIDQLPSKKRVRTDDLVTECNYIYDIMEETDNRYRPYNHRDTNI
LEDGYHVNLTYFRREIKSPSRGKRRDVSPCKSSNDICFMDLKDEEGRFDGYRPPSFRLYR
ESCTSSRRWQSPELPRGRHGIFSGTRKCDGGANLTNSIGSDQTSKYPGNQDNFKRRRGGQ
QSEGMQWVEDENSSRYQQNIFDAERTSYSFRRSSSDRRFNSFDNNHGPNPVEKLLDDRHV
EQEKYKLIREGNNASQFGQGSKVFHKDNHWRRFPRGRDSVDTGLIVENGESSGRCSKAGG
VTSFDRYSHLDSDSYVELKPIDGTSKPHFRKTLRTRNVTTDPKENDKGRLDIFSDANQEE
SLDIEEGQIIEEMNEKIIKKRITCSGKSQISEMKNFAYDKNVEGQDNNPRILEIMAKMEK
RGERFKQPIALKSDTKNVSKPLVDSFALSTEPMQPRPARKRRWAASKATV*

Transcript Sequence

Transcript ID

PGSC0003DMT400011772
Transcript Infomation

pacid=37445671 locus=PGSC0003DMG400004621 ID=PGSC0003DMT400011772.v4.03 annot-version=v4.03
Sequence

ATGGTGAACGTCGCCGGCGACGACGATGATGATTTCGGTGATATCTACGCCGACGTATTA
GTTCAAGCAAGTTCAGCTATCAATGCTCTACAGAGTTCAACGAAGGTTCAAACGGAAGTT
AATGAGGTTAACTACAATGCTGCTGTCGGAAACTGTAATCGTGAAAATGCTGTAAGAGGA
GAAGAGGAATGTGAGAGCGAGAGTGGAGATGACTTGAACATACTGTTGAATGATGATGAA
GGTGATGATAATTTTCTCAATGCTGGATGTGATGAGGATGAAACTGAGGGAAATGGAGGT
TTTAGTGTTAGTGATAAAGGAAATGGTTTAGGACAGAATTCAAATGGCAGCGGAAGTGGC
GATGGAGAGAAAAACAGTTACAAGAACACAAGACCACCACAAGCAGCATACTCAAGTCAT
CTCAAAGCCAATAGATCTTCTTGTGCGCCTTCTTACTCTACAGCATTTGTCAAGGGCAAA
TGGGAGGATAATAGCTACACACAAAGGGTGGGCTCAGGCTTTGCTGCTCAAAATGGACAG
AGCTTCTCACTTCCTCGGTCGAGGAATATATTGGACGTGAATATTGATATGTTTGAGAAG
AAACCTTGGCGGTATCCAGGCACTGACTTGACAGATTATTTTAATTTTGGCTTTGATGAA
GATAGTTGGAAACAGTATTGCAACTGCCTGGATGAGCACCGAGATCAAGCAAAAAAGATA
GTCAAAGATTCAGACTACAAGACTTCGAAAATTAGTAAGCCAAAAGGTAGAGAAATAGAG
GTGGAAGAGAGCATGATTGAGCGCCGACCATCAACAGATGTGGGACGTCCACAGTATCGG
GATTCTGGTGTCGTCATACAGATTGCTTTGCAGCAGTCAATGGAAGATCCCATAAGTTCT
ACAAAAGAGCAGCGGGAAGCATCTGAGAATGGAGATGTTGTTGGGGGAGATAGAAAGGAG
TTTCTCTGTTTCAGTAGTGCCAGCGAAGATGAGTTAACCAGCTTGGAAGGAATTGGAGAA
GGATCAGGCAAGTCTACATCTGGAAGGATTACACCTGTTTGTGAGCACGTGTCTATGGGT
TCAGATAACTACGGAAATTCTGAGTTCTCTGATGCAGATGAGCGACACCACCAAGAGGGG
ACCTACTGTAATGTTGATCAAACCTCAGGAGCAATTAGATCTTCTCATGATGCAAATAAA
AGCAGTGAGAGAGACATATCTGATCCAAGACAACCTATAAAGTTGCAAGAACCACTGCAT
GGTGGAGGCAGAGAGCATAGCCCAGGTTCATCTTGTTGTTCTCTAAGTCATGGTGGCACA
TCTGGAGATGGGACTTTTCTTGACTTAGAGAAATCTCATGATCATCATACAAGGTTATTA
TCAAACACAGAATCTGAGTTACGGGAGAAGGGTACAATTGATTACCAGCCAATTTATGGA
ACCAATCATAACAGAACAAAGTCTGGTGATCCTAAATATTTTACACGAGGTAGAAGGTCT
GTGCAAAGAGAACTGCTGCATGACAGAAGAAGACCTGGTCGAATGAGTGGAACAATTCCT
GCTCACCTGAAAGATGAGGATTCCCACAAATCAGATGCTAGGATACTGTATGAAAGGCGT
AATTCAACTGTGATCCGATACAGACAGAGAGATAGACGATATGCTTTTGACTCTCATGAA
AGGGAAGATACTTCACATTTTAAGAGGGCAGAACCCGTTTACTCTAATGCAGGACGATTT
TCTGATTATCCATGCCGGGATTCTTTTACAAAAAATCCTGAGATGGAACATCAGTTAAGA
TGTAAATATGACAAAAACTGGTCTGGCGGTCGAAGCGTGAAAAGAAAGCTAGATCCTCTT
GAACTATCAATTTATACAGATGATGAATTGTTGGAAAGAGATAGACCCCATTATGGGAGA
AGACTCACTGTTCAGGATATGGACACCGTTCCTTTTCATGAATCGGAACAATGGTTCGAT
AAGTATATTTCCTATTCAGATGATGAGAATCCCAGTCAACGAATGCGGAAAATAGATCAG
CTGCCGAGTAAGAAGAGAGTGAGGACTGATGATCTTGTAACTGAATGTAATTACATCTAC
GATATCATGGAAGAGACTGATAACAGATATAGACCATACAACCACAGGGATACTAATATT
CTAGAAGATGGCTATCATGTAAATTTGACTTATTTCAGAAGAGAAATTAAAAGCCCCAGT
AGGGGCAAAAGGAGAGATGTCAGTCCTTGCAAAAGTTCAAATGATATATGTTTCATGGAT
CTAAAGGATGAGGAAGGGAGATTTGATGGGTATCGACCTCCATCCTTTCGTTTGTATAGA
GAATCTTGTACTTCTAGCAGAAGGTGGCAGAGCCCTGAACTGCCACGTGGCAGACACGGA
ATATTCAGTGGGACTAGGAAATGTGATGGTGGTGCTAATTTGACCAACTCCATTGGTTCC
GATCAGACGAGCAAGTATCCTGGTAATCAGGACAATTTTAAAAGAAGAAGAGGGGGCCAG
CAGTCTGAAGGGATGCAATGGGTTGAAGATGAAAACAGTTCTAGGTATCAGCAAAATATA
TTCGATGCTGAGAGGACGTCATATTCGTTCAGAAGAAGTTCAAGTGACCGAAGGTTTAAT
TCATTTGACAATAATCATGGACCCAACCCAGTAGAAAAGCTTTTAGATGATAGGCATGTG
GAGCAGGAAAAATACAAATTGATCAGGGAAGGCAATAATGCCAGTCAATTTGGTCAAGGG
TCTAAAGTTTTTCATAAAGATAATCATTGGAGGAGATTCCCAAGAGGGAGAGATTCTGTT
GACACGGGCTTGATTGTTGAGAACGGAGAGTCCTCCGGAAGATGCTCCAAAGCAGGGGGT
GTAACATCCTTTGACAGGTATAGCCACTTGGATTCAGATAGTTATGTGGAGCTGAAGCCC
ATCGATGGAACTAGCAAACCCCATTTCAGGAAGACACTCAGAACTCGAAATGTGACGACT
GATCCTAAAGAAAATGATAAAGGAAGGCTTGATATATTCTCAGATGCCAACCAGGAAGAG
TCTCTGGATATTGAAGAAGGTCAGATAATTGAAGAAATGAACGAGAAAATCATTAAAAAG
AGAATCACATGTTCTGGCAAATCACAAATCAGTGAAATGAAGAATTTCGCGTATGATAAA
AATGTGGAGGGACAGGACAACAACCCTAGGATTTTGGAGATCATGGCAAAGATGGAAAAG
CGTGGAGAGCGTTTCAAGCAGCCTATTGCTCTCAAAAGTGATACAAAGAATGTCTCTAAG
CCTTTGGTTGATTCGTTTGCTTTGTCAACTGAACCTATGCAACCAAGACCAGCACGAAAG
AGGAGATGGGCTGCAAGCAAGGCAACTGTTTAA