Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400011757
CDS Infomation

pacid=37448733 polypeptide=PGSC0003DMP400008165 locus=PGSC0003DMG400004615 ID=PGSC0003DMT400011757.v4.03 annot-version=v4.03
Sequence

ATGGAATTTGATAATTTTGAAACCCAATTCATTATTGATCTTATTGGAGCTGTTAATCAT
CCTTTATCATGCCGACCCACAACACAAATTGGGTTGGCAAACTCTAATATTACCCAATTT
AGGGATTTCAATCAAAACCCACAAATATTTCTGGGCTTTCCACCAAACCCAGATGTGATT
TTGAGGATGGAAATCGAAAGATCAATGTCCCTGCTTCAGGTGATGGTAAATGAGGGTTTA
GTGCCTTGTGGAGAAGAGGAAATGAAGAGGAGAAATGCTATTGACAAGCTCAAAAAGATA
GTAGTGGAATGGGTTAAAACGGTGACTTACCAACGAGGTCTTCCAAAAAAGTACCTTAAG
TTTGCCTCTGGGACAATATTGACATATGGATCGTATGGTCTAGGAGTTTATAATTCAGAG
TCAGATATTGATGCTTTGTGTGTTGGTCCTTACTTTGCCACTATAGCTGAAGACTTTTTC
ATCATTCTGCATAACATGCTTGCAAGTAGTCCCGAAGTATCAGAAATCCACTGTGTCAAG
GATGCAAAAGTTCCTCTCATGCGATTCAAATTTGATGGGATATCCATTGATCTTCCCTAT
GCACGACTCAAAGTAATATCTATCCCCGAGAATGTGGACGTATTTAATCCATTCTTCCTT
AAGAATATTGACGACACAAGCTGGAAAAGTTTGTCTGGTGTGCGTGCCAATAGGAGCATT
CTTCATCTTGTGCCAAACATAGAGGTATTCCAAGCAGTGCTGCGTTGCATCAAATTATGG
GCTAAAAGACGTGGAGTTTATGCAAATTTACTTGGATTCTTCGGAGGAATTCACTTGGCC
GTGCTTTCAGCATTTATTTGCCAAAGGCATCCAAGTGCCAGCTTAAGCGCACTCATTTTA
CTTCTGTTCAAGACATTTACCTTGTGGCCTTGGCCAACTCCCGTAATTCTGCAAGACCAA
ATAACTAGGCCATTCACCCCGACTCATGATAAGGTTTCGTGGATGCCAATCCAGTTACCA
TGTAGCCCGTATGAATTTTGTCATTCCAACATTACCCGAAGCACATTCTATAAAATCAGG
ACAGAGTTCCTAAGAGGACATATGCTGACTAAGGATATGTTAAGCCCAGATTTTGATTGG
AATATCCTTTTTGAGCCTTTTCCTTATGCAAGAAAATATGGACTATTCGTTAAAATTTTC
CTTTCCGCTTGTGACAAAGATGAGCTAGGAGACTGGGTAGGTTGGGTCAAGTCACGTTTT
CGCTGCTTACTGGTCAAGCTGGAGGAGTTATTGGGTTTTTGTGACCCGAATCCAACTGAA
TATGCTGACACAGATGCATCAGAGCCTAATGTCATCTTTTACTGGGGATTACCAACTGGT
AGAGCTGATCTAATAAACGCTGAACTCGTGGAAGAATACTTTCTGAAGAGCATCGATCAT
GGATTGAATCAAGTCTCAACTGGAACGATGAAGTTATCGATTGTGAAAGCATATCAGTTG
CCTAAAAAAGCTGATCAGCTTACTGCTCTCGAACGAAAGAACTCTAAGACATGCTGGAGG
GTTGTTGATGGCAATCGAAAAAACACTGTTCCACAGCCTAAGTATAAACCTCATTGTGCT
GAATCTGCTGGTGATTACTTGCCTACAAACGAAAATCCAGAGTTCCCTAGTGCTGGGGGA
TAG

Peptide Sequence

PEP ID

PGSC0003DMP400008165
PEP Infomation

pacid=37448733 transcript=PGSC0003DMT400011757 locus=PGSC0003DMG400004615 ID=PGSC0003DMT400011757.v4.03 annot-version=v4.03
Sequence

MEFDNFETQFIIDLIGAVNHPLSCRPTTQIGLANSNITQFRDFNQNPQIFLGFPPNPDVI
LRMEIERSMSLLQVMVNEGLVPCGEEEMKRRNAIDKLKKIVVEWVKTVTYQRGLPKKYLK
FASGTILTYGSYGLGVYNSESDIDALCVGPYFATIAEDFFIILHNMLASSPEVSEIHCVK
DAKVPLMRFKFDGISIDLPYARLKVISIPENVDVFNPFFLKNIDDTSWKSLSGVRANRSI
LHLVPNIEVFQAVLRCIKLWAKRRGVYANLLGFFGGIHLAVLSAFICQRHPSASLSALIL
LLFKTFTLWPWPTPVILQDQITRPFTPTHDKVSWMPIQLPCSPYEFCHSNITRSTFYKIR
TEFLRGHMLTKDMLSPDFDWNILFEPFPYARKYGLFVKIFLSACDKDELGDWVGWVKSRF
RCLLVKLEELLGFCDPNPTEYADTDASEPNVIFYWGLPTGRADLINAELVEEYFLKSIDH
GLNQVSTGTMKLSIVKAYQLPKKADQLTALERKNSKTCWRVVDGNRKNTVPQPKYKPHCA
ESAGDYLPTNENPEFPSAGG*

Transcript Sequence

Transcript ID

PGSC0003DMT400011757
Transcript Infomation

pacid=37448733 locus=PGSC0003DMG400004615 ID=PGSC0003DMT400011757.v4.03 annot-version=v4.03
Sequence

ATGGAATTTGATAATTTTGAAACCCAATTCATTATTGATCTTATTGGAGCTGTTAATCAT
CCTTTATCATGCCGACCCACAACACAAATTGGGTTGGCAAACTCTAATATTACCCAATTT
AGGGATTTCAATCAAAACCCACAAATATTTCTGGGCTTTCCACCAAACCCAGATGTGATT
TTGAGGATGGAAATCGAAAGATCAATGTCCCTGCTTCAGGTGATGGTAAATGAGGGTTTA
GTGCCTTGTGGAGAAGAGGAAATGAAGAGGAGAAATGCTATTGACAAGCTCAAAAAGATA
GTAGTGGAATGGGTTAAAACGGTGACTTACCAACGAGGTCTTCCAAAAAAGTACCTTAAG
TTTGCCTCTGGGACAATATTGACATATGGATCGTATGGTCTAGGAGTTTATAATTCAGAG
TCAGATATTGATGCTTTGTGTGTTGGTCCTTACTTTGCCACTATAGCTGAAGACTTTTTC
ATCATTCTGCATAACATGCTTGCAAGTAGTCCCGAAGTATCAGAAATCCACTGTGTCAAG
GATGCAAAAGTTCCTCTCATGCGATTCAAATTTGATGGGATATCCATTGATCTTCCCTAT
GCACGACTCAAAGTAATATCTATCCCCGAGAATGTGGACGTATTTAATCCATTCTTCCTT
AAGAATATTGACGACACAAGCTGGAAAAGTTTGTCTGGTGTGCGTGCCAATAGGAGCATT
CTTCATCTTGTGCCAAACATAGAGGTATTCCAAGCAGTGCTGCGTTGCATCAAATTATGG
GCTAAAAGACGTGGAGTTTATGCAAATTTACTTGGATTCTTCGGAGGAATTCACTTGGCC
GTGCTTTCAGCATTTATTTGCCAAAGGCATCCAAGTGCCAGCTTAAGCGCACTCATTTTA
CTTCTGTTCAAGACATTTACCTTGTGGCCTTGGCCAACTCCCGTAATTCTGCAAGACCAA
ATAACTAGGCCATTCACCCCGACTCATGATAAGGTTTCGTGGATGCCAATCCAGTTACCA
TGTAGCCCGTATGAATTTTGTCATTCCAACATTACCCGAAGCACATTCTATAAAATCAGG
ACAGAGTTCCTAAGAGGACATATGCTGACTAAGGATATGTTAAGCCCAGATTTTGATTGG
AATATCCTTTTTGAGCCTTTTCCTTATGCAAGAAAATATGGACTATTCGTTAAAATTTTC
CTTTCCGCTTGTGACAAAGATGAGCTAGGAGACTGGGTAGGTTGGGTCAAGTCACGTTTT
CGCTGCTTACTGGTCAAGCTGGAGGAGTTATTGGGTTTTTGTGACCCGAATCCAACTGAA
TATGCTGACACAGATGCATCAGAGCCTAATGTCATCTTTTACTGGGGATTACCAACTGGT
AGAGCTGATCTAATAAACGCTGAACTCGTGGAAGAATACTTTCTGAAGAGCATCGATCAT
GGATTGAATCAAGTCTCAACTGGAACGATGAAGTTATCGATTGTGAAAGCATATCAGTTG
CCTAAAAAAGCTGATCAGCTTACTGCTCTCGAACGAAAGAACTCTAAGACATGCTGGAGG
GTTGTTGATGGCAATCGAAAAAACACTGTTCCACAGCCTAAGTATAAACCTCATTGTGCT
GAATCTGCTGGTGATTACTTGCCTACAAACGAAAATCCAGAGTTCCCTAGTGCTGGGGGA
TAG