Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400011748
CDS Infomation

pacid=37445985 polypeptide=PGSC0003DMP400008159 locus=PGSC0003DMG402004611 ID=PGSC0003DMT400011748.v4.03 annot-version=v4.03
Sequence

ATGGATCATCATCATCATCAATATGTCGATTTTGGTTTGAGAAGTGAAGATAATATTGAT
AGCAACGATAGAAAAGGTGATGAAAATAATAATAATTTGGACCTAAAAAGAGGTTCATGG
ACTGTTGAAGAAGATTTCACTCTTATGAATCATATTGCTCTTCACGGCGAAGGTCGTTGG
AATTCCCTCGCTCGTTCTGCAGGTTTAAAGAGAACCGGAAAAAGCTGCAGATTAAGATGG
CTTAATTATCTTAGACCAGATGTTCGACGTGGAAATATTACACTTGAAGAACAATTGTTG
ATTCTTCAACTTCATTCTCGTTGGGGCAATAGGTGGTCGAAAATTGCACAACATTTGCCT
GGAAGAACAGATAATGAGATAAAAAATTACTGGAGAACCCGAGTGCAAAAACAAGCCAAA
CAACTAAAGTGTGATGTCAATAGCAAAGAATTCAAAGATACATTGCATTATCTTTGGATA
CCAAGGCTAGTTGAGAGAATTCAAGCTTCTTCTAACTCAAATAATCAAGTGAATATTCAA
AAAACAAATGAAAATATTATTATTAACAATAATAATAATAATATTGTTCCAAATATGAAT
TTTACACAAGAGAATTATTCTAGTACAACAACAACAACTTCATCAGAAAACTCAATTGGG
ACACAAATTTCAGACATGTCTGATAATTGCTACACTAATTATCCTCTTAATCAAGGTGAT
TATGGGGAAATCTTGATTAGTCCCACAGGTGGTTATTTTCAACAAGGTGATATTTTTGAT
GATAATAATCATCACCAAAATATGAGCCAATTATTTTTGGATGATAATGTTTGTGACAAT
TTGTGGAATATTGATGATATGTTGTTTTTACAACAACAACTCAATTAA

Peptide Sequence

PEP ID

PGSC0003DMP400008159
PEP Infomation

pacid=37445985 transcript=PGSC0003DMT400011748 locus=PGSC0003DMG402004611 ID=PGSC0003DMT400011748.v4.03 annot-version=v4.03
Sequence

MDHHHHQYVDFGLRSEDNIDSNDRKGDENNNNLDLKRGSWTVEEDFTLMNHIALHGEGRW
NSLARSAGLKRTGKSCRLRWLNYLRPDVRRGNITLEEQLLILQLHSRWGNRWSKIAQHLP
GRTDNEIKNYWRTRVQKQAKQLKCDVNSKEFKDTLHYLWIPRLVERIQASSNSNNQVNIQ
KTNENIIINNNNNNIVPNMNFTQENYSSTTTTTSSENSIGTQISDMSDNCYTNYPLNQGD
YGEILISPTGGYFQQGDIFDDNNHHQNMSQLFLDDNVCDNLWNIDDMLFLQQQLN*

Transcript Sequence

Transcript ID

PGSC0003DMT400011748
Transcript Infomation

pacid=37445985 locus=PGSC0003DMG402004611 ID=PGSC0003DMT400011748.v4.03 annot-version=v4.03
Sequence

ATGGATCATCATCATCATCAATATGTCGATTTTGGTTTGAGAAGTGAAGATAATATTGAT
AGCAACGATAGAAAAGGTGATGAAAATAATAATAATTTGGACCTAAAAAGAGGTTCATGG
ACTGTTGAAGAAGATTTCACTCTTATGAATCATATTGCTCTTCACGGCGAAGGTCGTTGG
AATTCCCTCGCTCGTTCTGCAGGTTTAAAGAGAACCGGAAAAAGCTGCAGATTAAGATGG
CTTAATTATCTTAGACCAGATGTTCGACGTGGAAATATTACACTTGAAGAACAATTGTTG
ATTCTTCAACTTCATTCTCGTTGGGGCAATAGGTGGTCGAAAATTGCACAACATTTGCCT
GGAAGAACAGATAATGAGATAAAAAATTACTGGAGAACCCGAGTGCAAAAACAAGCCAAA
CAACTAAAGTGTGATGTCAATAGCAAAGAATTCAAAGATACATTGCATTATCTTTGGATA
CCAAGGCTAGTTGAGAGAATTCAAGCTTCTTCTAACTCAAATAATCAAGTGAATATTCAA
AAAACAAATGAAAATATTATTATTAACAATAATAATAATAATATTGTTCCAAATATGAAT
TTTACACAAGAGAATTATTCTAGTACAACAACAACAACTTCATCAGAAAACTCAATTGGG
ACACAAATTTCAGACATGTCTGATAATTGCTACACTAATTATCCTCTTAATCAAGGTGAT
TATGGGGAAATCTTGATTAGTCCCACAGGTGGTTATTTTCAACAAGGTGATATTTTTGAT
GATAATAATCATCACCAAAATATGAGCCAATTATTTTTGGATGATAATGTTTGTGACAAT
TTGTGGAATATTGATGATATGTTGTTTTTACAACAACAACTCAATTAA