Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400011740
CDS Infomation

pacid=37447417 polypeptide=PGSC0003DMP400008154 locus=PGSC0003DMG400004607 ID=PGSC0003DMT400011740.v4.03 annot-version=v4.03
Sequence

ATGTATAATGAAGGAGCCCCTGAGTTTGTTGTTGATCAGGGATTATATTATCCACCTGCC
ACCAATTATGGTTATTTCTGTACAGGATTAGAATCACCTGGTGATTGGGATGGCCACCAA
GGATTTTTTGGTCTGGATGGTCAGGATATTCAGTATATGGATGCTCAAACTGAAAGTTTC
CCGTATGTATATTATACACCTAACTATGGATGTGCACAGTCTTCATATAACCCATACAAC
CCTTACATTCCTGGTGCTGTAGTAGGAGTTGATGGACCATGTGCAGGGCCACAACATTAC
TACACAATCCCCCCTTATGAAAATTTGGGATCATCTTCGTACTTCCCCATGGCGGTGCCA
TCTACATCTAGTATTCCTGCGAATGCTGCAGACCCAATAATGGATAGTGTTCTATCTTCT
ACTAACAGAGCTGACGATCTTCGTCTTAAACGTAATTTATCTCCAACATCTCCAATATTT
ACCCCGACTTCATTAGGGCCAGCTTCAGGTTATAAAAGTGCATCTAACAGGGGATCTGAA
AGTGCAAAGATCAATGCTGCATCGAGCAAGCAGCACATGTCACATGGTTTTTCCAGTCCA
TCCTCTCAAGTACACCCGGGTAAAGTTGCTCAAGCTATAGGAAGCATTATTCATGGGAAG
GCTTTGTCTAATCACGGTCAACTGAGAGCTCCTCTTCCACCTGAAATTGACTTGTCTAAT
CACAGATCAGGTGCTCATGAGCGGGCTAATACAGATAAAATCAGGACAAAGTTTCTAAAT
GGAACAACCCCAAGTGATGGGAAAGTTAGTCCTGATATGTTGATGGAACAGAATAGAGGA
CCTCGGATTGACAGAATGAAAAAGCAATTGCTTGTGAAGGCCTACTCTACAAGAGCAGGA
AATGTTGATGTGCAAGGCAATATAGTTATTCATGCTGATGAGTATAATAGAGGTGATTTT
CTGATGGACTTCGTGAATGCAAAGTTTTTTGTAATCAAATCATACAGTGAGGATGATGTG
CACAAGAGTATAAAGTACAATGTTTGGTCATCAACTCCTAATGGGAACAAAAAGCTAAAT
AGTGCTTATGAAGATGCTCAGAGAATTACTGCTGGAAATCCAAGAGGCTGCCCAATATTC
CTTTTTTTCTCGGTTAATGCAAGTGGGCAGTTTTGTGGGGTCGCTGAAATGACTGGTCCT
GTAGACTTCTACAATGACATGGATTTCTGGCAGCAAGATAAGTGGAGTGGTAGCTTCCCT
GTGAAGTGGCACTTCATAAAGGATGTCCCAAACCCTAACTTTAGGCATATTATATTAGAG
AACAATGAGAACAAGCCAGTAACTAACAGCAGAGACACACAAGAGATACGCTACAAGAAA
GGCATTGAGATGCTGAAAGTATTTAAGGATTATGCGTCAAGGACATCATTACTAGACGAC
TTCATGTATTATGAAAACAGACAGAAACTCTTGCAGGAAGAGAAAGCCAAGCTGCTAATC
AGGAGCTACGATAGCCCATTTGCTGTTCCTGTACTGGATCCTCCACGCAAGCTAAATTCT
ACTCCAGGTTTACCTTCTGGTGAAAGTGAGAAGATCTCAAAGTGTGGTGAACAACAACAA
TCTGGAAATTGCATGGCTGTTCCTGCAGAACTGAATTCCATAGTTTCTAAAGCTAACAAA
GAGAGTGCAGATAATGGTGACAAACTTGTGGCTGAAGGAGGTCCACTCGTGAATACTGCA
CTGAAGATTGGTTCCCTAACTATCAACCCGAAACCATTGGAAGATAAGCCCCTGGATGTA
CATAGCACTACCAACACAGCGGCCAGCACCCAGTCAGTTGATGTTGTCACTGTGGGATCT
ATGCCTGTTAAAGTTAATGGATATGCTGAATCTTCTGGTTTCCTGACTATTGGAACAATT
CCTCTTGATCCTAGAGCTTTCCAGCGTGAAGAGGCCAGTGGATCTGGAAAAAAGGTCCTT
AAGTGA

Peptide Sequence

PEP ID

PGSC0003DMP400008154
PEP Infomation

pacid=37447417 transcript=PGSC0003DMT400011740 locus=PGSC0003DMG400004607 ID=PGSC0003DMT400011740.v4.03 annot-version=v4.03
Sequence

MYNEGAPEFVVDQGLYYPPATNYGYFCTGLESPGDWDGHQGFFGLDGQDIQYMDAQTESF
PYVYYTPNYGCAQSSYNPYNPYIPGAVVGVDGPCAGPQHYYTIPPYENLGSSSYFPMAVP
STSSIPANAADPIMDSVLSSTNRADDLRLKRNLSPTSPIFTPTSLGPASGYKSASNRGSE
SAKINAASSKQHMSHGFSSPSSQVHPGKVAQAIGSIIHGKALSNHGQLRAPLPPEIDLSN
HRSGAHERANTDKIRTKFLNGTTPSDGKVSPDMLMEQNRGPRIDRMKKQLLVKAYSTRAG
NVDVQGNIVIHADEYNRGDFLMDFVNAKFFVIKSYSEDDVHKSIKYNVWSSTPNGNKKLN
SAYEDAQRITAGNPRGCPIFLFFSVNASGQFCGVAEMTGPVDFYNDMDFWQQDKWSGSFP
VKWHFIKDVPNPNFRHIILENNENKPVTNSRDTQEIRYKKGIEMLKVFKDYASRTSLLDD
FMYYENRQKLLQEEKAKLLIRSYDSPFAVPVLDPPRKLNSTPGLPSGESEKISKCGEQQQ
SGNCMAVPAELNSIVSKANKESADNGDKLVAEGGPLVNTALKIGSLTINPKPLEDKPLDV
HSTTNTAASTQSVDVVTVGSMPVKVNGYAESSGFLTIGTIPLDPRAFQREEASGSGKKVL
K*

Transcript Sequence

Transcript ID

PGSC0003DMT400011740
Transcript Infomation

pacid=37447417 locus=PGSC0003DMG400004607 ID=PGSC0003DMT400011740.v4.03 annot-version=v4.03
Sequence

ATGTATAATGAAGGAGCCCCTGAGTTTGTTGTTGATCAGGGATTATATTATCCACCTGCC
ACCAATTATGGTTATTTCTGTACAGGATTAGAATCACCTGGTGATTGGGATGGCCACCAA
GGATTTTTTGGTCTGGATGGTCAGGATATTCAGTATATGGATGCTCAAACTGAAAGTTTC
CCGTATGTATATTATACACCTAACTATGGATGTGCACAGTCTTCATATAACCCATACAAC
CCTTACATTCCTGGTGCTGTAGTAGGAGTTGATGGACCATGTGCAGGGCCACAACATTAC
TACACAATCCCCCCTTATGAAAATTTGGGATCATCTTCGTACTTCCCCATGGCGGTGCCA
TCTACATCTAGTATTCCTGCGAATGCTGCAGACCCAATAATGGATAGTGTTCTATCTTCT
ACTAACAGAGCTGACGATCTTCGTCTTAAACGTAATTTATCTCCAACATCTCCAATATTT
ACCCCGACTTCATTAGGGCCAGCTTCAGGTTATAAAAGTGCATCTAACAGGGGATCTGAA
AGTGCAAAGATCAATGCTGCATCGAGCAAGCAGCACATGTCACATGGTTTTTCCAGTCCA
TCCTCTCAAGTACACCCGGGTAAAGTTGCTCAAGCTATAGGAAGCATTATTCATGGGAAG
GCTTTGTCTAATCACGGTCAACTGAGAGCTCCTCTTCCACCTGAAATTGACTTGTCTAAT
CACAGATCAGGTGCTCATGAGCGGGCTAATACAGATAAAATCAGGACAAAGTTTCTAAAT
GGAACAACCCCAAGTGATGGGAAAGTTAGTCCTGATATGTTGATGGAACAGAATAGAGGA
CCTCGGATTGACAGAATGAAAAAGCAATTGCTTGTGAAGGCCTACTCTACAAGAGCAGGA
AATGTTGATGTGCAAGGCAATATAGTTATTCATGCTGATGAGTATAATAGAGGTGATTTT
CTGATGGACTTCGTGAATGCAAAGTTTTTTGTAATCAAATCATACAGTGAGGATGATGTG
CACAAGAGTATAAAGTACAATGTTTGGTCATCAACTCCTAATGGGAACAAAAAGCTAAAT
AGTGCTTATGAAGATGCTCAGAGAATTACTGCTGGAAATCCAAGAGGCTGCCCAATATTC
CTTTTTTTCTCGGTTAATGCAAGTGGGCAGTTTTGTGGGGTCGCTGAAATGACTGGTCCT
GTAGACTTCTACAATGACATGGATTTCTGGCAGCAAGATAAGTGGAGTGGTAGCTTCCCT
GTGAAGTGGCACTTCATAAAGGATGTCCCAAACCCTAACTTTAGGCATATTATATTAGAG
AACAATGAGAACAAGCCAGTAACTAACAGCAGAGACACACAAGAGATACGCTACAAGAAA
GGCATTGAGATGCTGAAAGTATTTAAGGATTATGCGTCAAGGACATCATTACTAGACGAC
TTCATGTATTATGAAAACAGACAGAAACTCTTGCAGGAAGAGAAAGCCAAGCTGCTAATC
AGGAGCTACGATAGCCCATTTGCTGTTCCTGTACTGGATCCTCCACGCAAGCTAAATTCT
ACTCCAGGTTTACCTTCTGGTGAAAGTGAGAAGATCTCAAAGTGTGGTGAACAACAACAA
TCTGGAAATTGCATGGCTGTTCCTGCAGAACTGAATTCCATAGTTTCTAAAGCTAACAAA
GAGAGTGCAGATAATGGTGACAAACTTGTGGCTGAAGGAGGTCCACTCGTGAATACTGCA
CTGAAGATTGGTTCCCTAACTATCAACCCGAAACCATTGGAAGATAAGCCCCTGGATGTA
CATAGCACTACCAACACAGCGGCCAGCACCCAGTCAGTTGATGTTGTCACTGTGGGATCT
ATGCCTGTTAAAGTTAATGGATATGCTGAATCTTCTGGTTTCCTGACTATTGGAACAATT
CCTCTTGATCCTAGAGCTTTCCAGCGTGAAGAGGCCAGTGGATCTGGAAAAAAGGTCCTT
AAGTGA