Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400011738
CDS Infomation

pacid=37447267 polypeptide=PGSC0003DMP400008152 locus=PGSC0003DMG400004606 ID=PGSC0003DMT400011738.v4.03 annot-version=v4.03
Sequence

ATGGTAGAGGGAGGAATAAGCAAAGCAGATAAAACAGAGTTTACAGAGTGCTGGAGTGCA
GTATGGAGAACTCCTTATATTATGAAGCTAGCTTTATCAGCTGGCATTGGAGGATTTCTA
TTTGGTTATGATACCGGAGTTATTTCTGGGGCGCTTCTCTACATAAGGGAAGATTTCAAA
GACGTTGATAGGAAGACATGGCTACAAGAAACTATTGTTAGTATGGCTGTTGCTGGTGCA
ATTTTCGGTGCTGCTACTGGTGGTTGGCTTAATGATAAGTTCGGAAGGAGACTTTCTATT
CTCATTGCTGATATTCTCTTCTTTGCTGGTGCACTCGTTATGGCTCTTGCACCAGCTCCT
TGGGTGATCATCGTTGGAAGGATATTCGTTGGTTTAGGAGTTGGAATGGCATCAATGACA
GCTCCGCTTTATATATCAGAAGCTTCTCCTCATAAGATCAGAGGTGCTCTTGTCAGCCTG
AACGGTTTACTCATTACTGGAGGACAATTCCTTTCTTATCTAATCAATCTTGCCTTCACT
GATGTGAAAGGAACGTGGCGTTGGATGCTTGGCATTGCTGGACTTCCAGCAGTTGTTCAA
TTTGTACTCATGCTTGCCCTCCCTGAGTCTCCAAGATGGCTTTACAGAAAGGGTAAAGTG
GATGAGTCGAGGGATATCATAGCTAAAATTTATCCAGCAGAGGAAGTAGAGAACGAAATG
CTGGCAATGAAGAAGTCGGTTGAAGAAGAAAAGGAAATCGAAGGCTCCATTGGAAGTAGC
ACGTTTACTCAAATCAAGAAAGCATTTGGAAGCACAACATGTAGAAGAGCACTCTATGCT
GGTATCTGTGTTCAAGTGGCTCAACAATTCGTCGGTATCAACACTGTTATGTACTACAGT
CCAACTATCATGCAATTTGCTGGAATTGCATCAAATAAGACTGCTGTAGCATTATCACTT
ATCACCTCTGGTCTTAACGCGGTTGGATCCATAGTCAGTATGGCATTTGTCGATAGATAT
GGTAGGAGGAGACTCATGATCATCTCCATGGTGGGAATCATTTCTTGCCTCATTGTCTTG
TCAGTCGTGTTCTTCCAAGCATCGGCTCATGCACCAGCAATCAGCGGTACTGAAACTGCT
CATTTTGGCAACAATACTTGTACAGCCTATGCCAATGCCCCAAATCCAGCTTCTTGGAAT
TGCATGAAGTGTTTGGCTAAAGAAGCTGAGTGTGGATTTTGTTCAAACACCAATCTGTAT
GCTCCTGGAGCATGTATAGCAAAAACAGATGCATTAGCAGGAGCTTGCAAAGCAGAGAAA
CGCGTTTGGTACACAAAAGGTTGTCCAAGCAAGTTTGGGTTCTTAGCAGTTGTTTTCCTC
GCGTTATATATCATAGTATACTCCCCAGGTATGGGAACAGTTCCTTGGATTGTCAACTCT
GAGATTTACCCTTTGAGATTCAGAGGAGTTGGTGGAGGCCTTGCAGCAGTTTCAAACTGG
ACTTCAAATCTAATTGTTAGTCTAACATTCTTGACGTTAACTGAACATCTTGGCTCCTCT
GGCACCTTCCTCCTATTCGCGGGGTTTTCATTTCTTGGACTCATAGCCATCTTCTTCCTC
GTTCCTGAAACCAAAGGGATGCAATTTGAGGAAGTCGAAAAATTGTTGCAGAAAGGATAC
TCTCCTTTTAGAAAGAACAGTAGTTCTACTAAAGAAATCTCTGATCACACAAAATGA

Peptide Sequence

PEP ID

PGSC0003DMP400008152
PEP Infomation

pacid=37447267 transcript=PGSC0003DMT400011738 locus=PGSC0003DMG400004606 ID=PGSC0003DMT400011738.v4.03 annot-version=v4.03
Sequence

MVEGGISKADKTEFTECWSAVWRTPYIMKLALSAGIGGFLFGYDTGVISGALLYIREDFK
DVDRKTWLQETIVSMAVAGAIFGAATGGWLNDKFGRRLSILIADILFFAGALVMALAPAP
WVIIVGRIFVGLGVGMASMTAPLYISEASPHKIRGALVSLNGLLITGGQFLSYLINLAFT
DVKGTWRWMLGIAGLPAVVQFVLMLALPESPRWLYRKGKVDESRDIIAKIYPAEEVENEM
LAMKKSVEEEKEIEGSIGSSTFTQIKKAFGSTTCRRALYAGICVQVAQQFVGINTVMYYS
PTIMQFAGIASNKTAVALSLITSGLNAVGSIVSMAFVDRYGRRRLMIISMVGIISCLIVL
SVVFFQASAHAPAISGTETAHFGNNTCTAYANAPNPASWNCMKCLAKEAECGFCSNTNLY
APGACIAKTDALAGACKAEKRVWYTKGCPSKFGFLAVVFLALYIIVYSPGMGTVPWIVNS
EIYPLRFRGVGGGLAAVSNWTSNLIVSLTFLTLTEHLGSSGTFLLFAGFSFLGLIAIFFL
VPETKGMQFEEVEKLLQKGYSPFRKNSSSTKEISDHTK*

Transcript Sequence

Transcript ID

PGSC0003DMT400011738
Transcript Infomation

pacid=37447267 locus=PGSC0003DMG400004606 ID=PGSC0003DMT400011738.v4.03 annot-version=v4.03
Sequence

ATGGTAGAGGGAGGAATAAGCAAAGCAGATAAAACAGAGTTTACAGAGTGCTGGAGTGCA
GTATGGAGAACTCCTTATATTATGAAGCTAGCTTTATCAGCTGGCATTGGAGGATTTCTA
TTTGGTTATGATACCGGAGTTATTTCTGGGGCGCTTCTCTACATAAGGGAAGATTTCAAA
GACGTTGATAGGAAGACATGGCTACAAGAAACTATTGTTAGTATGGCTGTTGCTGGTGCA
ATTTTCGGTGCTGCTACTGGTGGTTGGCTTAATGATAAGTTCGGAAGGAGACTTTCTATT
CTCATTGCTGATATTCTCTTCTTTGCTGGTGCACTCGTTATGGCTCTTGCACCAGCTCCT
TGGGTGATCATCGTTGGAAGGATATTCGTTGGTTTAGGAGTTGGAATGGCATCAATGACA
GCTCCGCTTTATATATCAGAAGCTTCTCCTCATAAGATCAGAGGTGCTCTTGTCAGCCTG
AACGGTTTACTCATTACTGGAGGACAATTCCTTTCTTATCTAATCAATCTTGCCTTCACT
GATGTGAAAGGAACGTGGCGTTGGATGCTTGGCATTGCTGGACTTCCAGCAGTTGTTCAA
TTTGTACTCATGCTTGCCCTCCCTGAGTCTCCAAGATGGCTTTACAGAAAGGGTAAAGTG
GATGAGTCGAGGGATATCATAGCTAAAATTTATCCAGCAGAGGAAGTAGAGAACGAAATG
CTGGCAATGAAGAAGTCGGTTGAAGAAGAAAAGGAAATCGAAGGCTCCATTGGAAGTAGC
ACGTTTACTCAAATCAAGAAAGCATTTGGAAGCACAACATGTAGAAGAGCACTCTATGCT
GGTATCTGTGTTCAAGTGGCTCAACAATTCGTCGGTATCAACACTGTTATGTACTACAGT
CCAACTATCATGCAATTTGCTGGAATTGCATCAAATAAGACTGCTGTAGCATTATCACTT
ATCACCTCTGGTCTTAACGCGGTTGGATCCATAGTCAGTATGGCATTTGTCGATAGATAT
GGTAGGAGGAGACTCATGATCATCTCCATGGTGGGAATCATTTCTTGCCTCATTGTCTTG
TCAGTCGTGTTCTTCCAAGCATCGGCTCATGCACCAGCAATCAGCGGTACTGAAACTGCT
CATTTTGGCAACAATACTTGTACAGCCTATGCCAATGCCCCAAATCCAGCTTCTTGGAAT
TGCATGAAGTGTTTGGCTAAAGAAGCTGAGTGTGGATTTTGTTCAAACACCAATCTGTAT
GCTCCTGGAGCATGTATAGCAAAAACAGATGCATTAGCAGGAGCTTGCAAAGCAGAGAAA
CGCGTTTGGTACACAAAAGGTTGTCCAAGCAAGTTTGGGTTCTTAGCAGTTGTTTTCCTC
GCGTTATATATCATAGTATACTCCCCAGGTATGGGAACAGTTCCTTGGATTGTCAACTCT
GAGATTTACCCTTTGAGATTCAGAGGAGTTGGTGGAGGCCTTGCAGCAGTTTCAAACTGG
ACTTCAAATCTAATTGTTAGTCTAACATTCTTGACGTTAACTGAACATCTTGGCTCCTCT
GGCACCTTCCTCCTATTCGCGGGGTTTTCATTTCTTGGACTCATAGCCATCTTCTTCCTC
GTTCCTGAAACCAAAGGGATGCAATTTGAGGAAGTCGAAAAATTGTTGCAGAAAGGATAC
TCTCCTTTTAGAAAGAACAGTAGTTCTACTAAAGAAATCTCTGATCACACAAAATGA