Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400011735
CDS Infomation

pacid=37449065 polypeptide=PGSC0003DMP400008149 locus=PGSC0003DMG400004604 ID=PGSC0003DMT400011735.v4.03 annot-version=v4.03
Sequence

ATGAAGCTTCTTGTACTTCTTGGGAGATGCGGACAACCAGGGCAAGCACAACAACTTTTT
GATACAATGATTGAAGAGGGATTGGAACCCACACCAGAATTCTATACAGCCTTGGTTGGT
GCTTACTGTAGAAGCAACATAATTGACAAGGCATTTGCGATTCTTCAACAGATGATTGAG
CTCCCTTATTGTCAGCCAAATGTTTATACATACAGTATATTGATTAAGGCATGTGTGGAT
GCATCCCGATTTGATCTGGTTGACTCTCTTTATGAACAAATGACTGAACGTTCCATAGTT
CCTAACACTGTCACTCAAAATATAGTCTTGAGTGGTTACGGGAGAGCGGGGAAATATGAA
GAGATGGAGAAAGTGCTTTTGGGAATGCTTGAGAGCACAGACAGCAGACCTGATATATGG
ACAATGAACACAATCCTGAGCTTATTTGGCAACAAGGGGCAAGTTGAAATGATGGAGAGA
TGGTATGAAAAGTTTTGTAGTTTCGGTATTGAGCCAGAGACACGAACATTTAATATCCTT
ATTAGTGCTTATGGGAAGAAAAGAATGTACGATAAGATGTCATCGGTGATGGAGTACATG
CGTAAACTTTCATTTCCTTGGACAACATCGACTTACAACAACGTCATCGAAGCGTTTTCA
GATATAGGTGATGCAAAGCATATGGAGTACACATTTGATCAAATGCGTGCTGAAGGCGCT
AAAGGTGACACCAAGACTTTTTGCTGTCTCATTAGAGGATATGCAAATGCAGGCCTTTTT
CCTAAGGTGATCAGCACTGTCCAATTAGCTGGGAAGTTGGAGATCCCTGAAAACAATTCC
TTTTTCAGTTCTGTTATTTATGCTTGTGCAAAGGCAGAGGACTTATTGGAGATGGAGAGA
GTTTTCAAGCGAATGAAAGATAAGGGATTCCAACCAGATGACACAACTTACACTGTTATG
GCTGAGGCATATAGAAAAGAAGGTATGACAGACAAAGTCTATGATTTAGAGCAAGAAAAA
CGGATGATGTCTGCCTCAGAGTCCAGCGACAGCCAAGAAAAGCTAGAGCTAATGCCTACT
TGA

Peptide Sequence

PEP ID

PGSC0003DMP400008149
PEP Infomation

pacid=37449065 transcript=PGSC0003DMT400011735 locus=PGSC0003DMG400004604 ID=PGSC0003DMT400011735.v4.03 annot-version=v4.03
Sequence

MKLLVLLGRCGQPGQAQQLFDTMIEEGLEPTPEFYTALVGAYCRSNIIDKAFAILQQMIE
LPYCQPNVYTYSILIKACVDASRFDLVDSLYEQMTERSIVPNTVTQNIVLSGYGRAGKYE
EMEKVLLGMLESTDSRPDIWTMNTILSLFGNKGQVEMMERWYEKFCSFGIEPETRTFNIL
ISAYGKKRMYDKMSSVMEYMRKLSFPWTTSTYNNVIEAFSDIGDAKHMEYTFDQMRAEGA
KGDTKTFCCLIRGYANAGLFPKVISTVQLAGKLEIPENNSFFSSVIYACAKAEDLLEMER
VFKRMKDKGFQPDDTTYTVMAEAYRKEGMTDKVYDLEQEKRMMSASESSDSQEKLELMPT
*

Transcript Sequence

Transcript ID

PGSC0003DMT400011735
Transcript Infomation

pacid=37449065 locus=PGSC0003DMG400004604 ID=PGSC0003DMT400011735.v4.03 annot-version=v4.03
Sequence

ATGAAGCTTCTTGTACTTCTTGGGAGATGCGGACAACCAGGGCAAGCACAACAACTTTTT
GATACAATGATTGAAGAGGGATTGGAACCCACACCAGAATTCTATACAGCCTTGGTTGGT
GCTTACTGTAGAAGCAACATAATTGACAAGGCATTTGCGATTCTTCAACAGATGATTGAG
CTCCCTTATTGTCAGCCAAATGTTTATACATACAGTATATTGATTAAGGCATGTGTGGAT
GCATCCCGATTTGATCTGGTTGACTCTCTTTATGAACAAATGACTGAACGTTCCATAGTT
CCTAACACTGTCACTCAAAATATAGTCTTGAGTGGTTACGGGAGAGCGGGGAAATATGAA
GAGATGGAGAAAGTGCTTTTGGGAATGCTTGAGAGCACAGACAGCAGACCTGATATATGG
ACAATGAACACAATCCTGAGCTTATTTGGCAACAAGGGGCAAGTTGAAATGATGGAGAGA
TGGTATGAAAAGTTTTGTAGTTTCGGTATTGAGCCAGAGACACGAACATTTAATATCCTT
ATTAGTGCTTATGGGAAGAAAAGAATGTACGATAAGATGTCATCGGTGATGGAGTACATG
CGTAAACTTTCATTTCCTTGGACAACATCGACTTACAACAACGTCATCGAAGCGTTTTCA
GATATAGGTGATGCAAAGCATATGGAGTACACATTTGATCAAATGCGTGCTGAAGGCGCT
AAAGGTGACACCAAGACTTTTTGCTGTCTCATTAGAGGATATGCAAATGCAGGCCTTTTT
CCTAAGGTGATCAGCACTGTCCAATTAGCTGGGAAGTTGGAGATCCCTGAAAACAATTCC
TTTTTCAGTTCTGTTATTTATGCTTGTGCAAAGGCAGAGGACTTATTGGAGATGGAGAGA
GTTTTCAAGCGAATGAAAGATAAGGGATTCCAACCAGATGACACAACTTACACTGTTATG
GCTGAGGCATATAGAAAAGAAGGTATGACAGACAAAGTCTATGATTTAGAGCAAGAAAAA
CGGATGATGTCTGCCTCAGAGTCCAGCGACAGCCAAGAAAAGCTAGAGCTAATGCCTACT
TGA