Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400011730
CDS Infomation

pacid=37447547 polypeptide=PGSC0003DMP400008144 locus=PGSC0003DMG400004602 ID=PGSC0003DMT400011730.v4.03 annot-version=v4.03
Sequence

ATGGCGAATTTGGACTTACAAATGAACCCACAAATGGAACAGATCCATGGAGAGATTCGG
GATAATTTCCGAGCTCTAGCAAATGGATTTCAAAAGCTGGATAAGATCAAAGATTCCAAT
AGACAGAGTAAACAGTTGGAAGAACTTACTGGAAAGATGAGAGAGTGTAAAAGGTTAGTT
AAAGAGTTTGATCGTGAGATTAAAGATGAGGAGAGTAAAAGTCCTCCTGAGGTCAACAAA
CAACTCAATGATGAGAAGCAATCAATGATCAAAGAGCTAAACTCATATGTGGCCTTGAGA
AAAACGTATATGAGCAGTCTTGGCAATAAGAGGGTTGAACTATTTGATATGGGAGCAGGT
GGAAGTGATCCAACAGCGGAGGAAAACGCTCAGATGGCATCAGAAATGTCAAATCAGGAG
CTCATCAGTGCTGGAAATAAGACAATGGATGAAACTGATCAAGCCATTGAACGCTCCAAA
CAGGTTGTTCACCAAACAATTGAAGTGGGAACACAAACTGCTTCTACCTTGAAAGGCCAA
ACTGATCAAATGGGTCGTGTTGTCAACGAGCTTGACACAATTCACTTCTCCATTAAAAAA
GCTTCCCAGCTTGTCAAGGAAATTGGACGGCAGGTTGCCACGGATAAATGCATCATGCTT
TTCCTCTTCCTCATTGTCTGTGGTGTAGTTGCCATAATTGTTGTGAAGATTGTGAATCCT
CACAACAAGGATATAAGGGATATCCCCGGACTGGCACCTCCTGCACCTGCAAGGAGATTG
CTATATCTAAGGCCTGGACAAGATTTCATGTAA

Peptide Sequence

PEP ID

PGSC0003DMP400008144
PEP Infomation

pacid=37447547 transcript=PGSC0003DMT400011730 locus=PGSC0003DMG400004602 ID=PGSC0003DMT400011730.v4.03 annot-version=v4.03
Sequence

MANLDLQMNPQMEQIHGEIRDNFRALANGFQKLDKIKDSNRQSKQLEELTGKMRECKRLV
KEFDREIKDEESKSPPEVNKQLNDEKQSMIKELNSYVALRKTYMSSLGNKRVELFDMGAG
GSDPTAEENAQMASEMSNQELISAGNKTMDETDQAIERSKQVVHQTIEVGTQTASTLKGQ
TDQMGRVVNELDTIHFSIKKASQLVKEIGRQVATDKCIMLFLFLIVCGVVAIIVVKIVNP
HNKDIRDIPGLAPPAPARRLLYLRPGQDFM*

Transcript Sequence

Transcript ID

PGSC0003DMT400011730
Transcript Infomation

pacid=37447547 locus=PGSC0003DMG400004602 ID=PGSC0003DMT400011730.v4.03 annot-version=v4.03
Sequence

ATGGCGAATTTGGACTTACAAATGAACCCACAAATGGAACAGATCCATGGAGAGATTCGG
GATAATTTCCGAGCTCTAGCAAATGGATTTCAAAAGCTGGATAAGATCAAAGATTCCAAT
AGACAGAGTAAACAGTTGGAAGAACTTACTGGAAAGATGAGAGAGTGTAAAAGGTTAGTT
AAAGAGTTTGATCGTGAGATTAAAGATGAGGAGAGTAAAAGTCCTCCTGAGGTCAACAAA
CAACTCAATGATGAGAAGCAATCAATGATCAAAGAGCTAAACTCATATGTGGCCTTGAGA
AAAACGTATATGAGCAGTCTTGGCAATAAGAGGGTTGAACTATTTGATATGGGAGCAGGT
GGAAGTGATCCAACAGCGGAGGAAAACGCTCAGATGGCATCAGAAATGTCAAATCAGGAG
CTCATCAGTGCTGGAAATAAGACAATGGATGAAACTGATCAAGCCATTGAACGCTCCAAA
CAGGTTGTTCACCAAACAATTGAAGTGGGAACACAAACTGCTTCTACCTTGAAAGGCCAA
ACTGATCAAATGGGTCGTGTTGTCAACGAGCTTGACACAATTCACTTCTCCATTAAAAAA
GCTTCCCAGCTTGTCAAGGAAATTGGACGGCAGGTTGCCACGGATAAATGCATCATGCTT
TTCCTCTTCCTCATTGTCTGTGGTGTAGTTGCCATAATTGTTGTGAAGATTGTGAATCCT
CACAACAAGGATATAAGGGATATCCCCGGACTGGCACCTCCTGCACCTGCAAGGAGATTG
CTATATCTAAGGCCTGGACAAGATTTCATGTAA