Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400011725
CDS Infomation

pacid=37446525 polypeptide=PGSC0003DMP400008142 locus=PGSC0003DMG400004601 ID=PGSC0003DMT400011725.v4.03 annot-version=v4.03
Sequence

ATGGTACTGATTCATCATCAGCAACAGCAGCAGCAGGAAGAAGAAATAGTACGAAGAGAA
AGAGGTAAAAAGGGAATGCGAGTAGGGAAATACGAGCTTGGAAGAACACTAGGAGAAGGT
AATTTTGGGAAAGTGAAGTTCGCTAAGCATACAGATTCAGCCCAATCTTTTGCTATTAAG
ATTTTGGAGAAGAATCGGATCCAGGACCTTCGAATCACTGATCAGATAAAGAGGGAAATT
CGAACCTTGAAAGTTCTCAAGCATCCAAATGTGGTTAGATTATACGAGGTATTAGCAAGC
AAAACCAAGATTTATATGGTGTTGGAATATGTAAATGGTGGTGAATTATTTGATAGAATA
GCTTCTAAAGGTAAACTTTCAGAAACACAAGGGAGAAAACTATTTCAACAATTAATTGAT
GGTGTTAGTTATTGCCATGACAAAGGTGTCTTCCATAGAGACCTCAAGCTAGAGAATGTG
CTCATTGATGGTGGCAGAAACATAAAGATATCAGATTTTGGACTAAGTGCATTGCCTCAA
CATCTTAGGGATGATGGCTTGCTGCATACAACATGTGGTAGTCCCAACTATGTTGCTCCT
GAAGTTCTTTCTAACAGAGGCTATAATGGTGCAACTTCAGATACTTGGTCCTGTGGTGTC
ATTTTATATGTCATTCTCACTGGCTTTTTACCCTTTGATGATAGAAATCTTGCAGTGCTT
TATCAAAAGATTTTTAAAGGGGATGCTCCAATACCAAAGTGGCTATCACAAGGAGCAAAG
AATCTTATAAAGAGGATTCTTGATCCAAATCCACAAACTAGAATAACAATGGCAGAGATT
AAAGAAGATGAATGGTTTAAACAAAACTATACTCCTACAAATCCTGATGAAGAGGAAGAT
TTGGAAAGTGATGATACATCCTCTGATGATGAAGTGTTGACAATACATGAAGTACCACTT
GACATAGAAAGAAATCCAGAATCACCTTCTCTTATCAATAATGCCTTTCAACTTATAGGA
ATGTCCTCATGCCTTGATCTTTCTGGATTTTTTGAAAATGAGGATGTTTCTGAGAGGAAG
ATCAGGTTCACATCTAATCTCTCTCCAAAAGAATTGCTAGATAGGATTGAGAATTTAGCA
GTTCAAATGGGATTTCAAGTCCAGAAAAAATCTGGAAAGTTAAAATTATTGCTAGAGAAC
AAAGGTCAAAAAACACAAGCCAGTCTTTCAATAGTAGCAGAGGTTTTTGAGATTAGTATA
TCCTTGTATGTTGTAGAGTTACAAAAATCTTCCGGGGATTCTGCAGTATATAGACAGTTG
TGTAATAGATTATCAGATGAATTGGGAGTCCAGCAAAGTGAAGAACTACTGACAAATCTA
ATTGTGAAAGATGGAAATCATACCAGTGAGTAA

Peptide Sequence

PEP ID

PGSC0003DMP400008142
PEP Infomation

pacid=37446525 transcript=PGSC0003DMT400011725 locus=PGSC0003DMG400004601 ID=PGSC0003DMT400011725.v4.03 annot-version=v4.03
Sequence

MVLIHHQQQQQQEEEIVRRERGKKGMRVGKYELGRTLGEGNFGKVKFAKHTDSAQSFAIK
ILEKNRIQDLRITDQIKREIRTLKVLKHPNVVRLYEVLASKTKIYMVLEYVNGGELFDRI
ASKGKLSETQGRKLFQQLIDGVSYCHDKGVFHRDLKLENVLIDGGRNIKISDFGLSALPQ
HLRDDGLLHTTCGSPNYVAPEVLSNRGYNGATSDTWSCGVILYVILTGFLPFDDRNLAVL
YQKIFKGDAPIPKWLSQGAKNLIKRILDPNPQTRITMAEIKEDEWFKQNYTPTNPDEEED
LESDDTSSDDEVLTIHEVPLDIERNPESPSLINNAFQLIGMSSCLDLSGFFENEDVSERK
IRFTSNLSPKELLDRIENLAVQMGFQVQKKSGKLKLLLENKGQKTQASLSIVAEVFEISI
SLYVVELQKSSGDSAVYRQLCNRLSDELGVQQSEELLTNLIVKDGNHTSE*

Transcript Sequence

Transcript ID

PGSC0003DMT400011725
Transcript Infomation

pacid=37446525 locus=PGSC0003DMG400004601 ID=PGSC0003DMT400011725.v4.03 annot-version=v4.03
Sequence

ATGGTACTGATTCATCATCAGCAACAGCAGCAGCAGGAAGAAGAAATAGTACGAAGAGAA
AGAGGTAAAAAGGGAATGCGAGTAGGGAAATACGAGCTTGGAAGAACACTAGGAGAAGGT
AATTTTGGGAAAGTGAAGTTCGCTAAGCATACAGATTCAGCCCAATCTTTTGCTATTAAG
ATTTTGGAGAAGAATCGGATCCAGGACCTTCGAATCACTGATCAGATAAAGAGGGAAATT
CGAACCTTGAAAGTTCTCAAGCATCCAAATGTGGTTAGATTATACGAGGTATTAGCAAGC
AAAACCAAGATTTATATGGTGTTGGAATATGTAAATGGTGGTGAATTATTTGATAGAATA
GCTTCTAAAGGTAAACTTTCAGAAACACAAGGGAGAAAACTATTTCAACAATTAATTGAT
GGTGTTAGTTATTGCCATGACAAAGGTGTCTTCCATAGAGACCTCAAGCTAGAGAATGTG
CTCATTGATGGTGGCAGAAACATAAAGATATCAGATTTTGGACTAAGTGCATTGCCTCAA
CATCTTAGGGATGATGGCTTGCTGCATACAACATGTGGTAGTCCCAACTATGTTGCTCCT
GAAGTTCTTTCTAACAGAGGCTATAATGGTGCAACTTCAGATACTTGGTCCTGTGGTGTC
ATTTTATATGTCATTCTCACTGGCTTTTTACCCTTTGATGATAGAAATCTTGCAGTGCTT
TATCAAAAGATTTTTAAAGGGGATGCTCCAATACCAAAGTGGCTATCACAAGGAGCAAAG
AATCTTATAAAGAGGATTCTTGATCCAAATCCACAAACTAGAATAACAATGGCAGAGATT
AAAGAAGATGAATGGTTTAAACAAAACTATACTCCTACAAATCCTGATGAAGAGGAAGAT
TTGGAAAGTGATGATACATCCTCTGATGATGAAGTGTTGACAATACATGAAGTACCACTT
GACATAGAAAGAAATCCAGAATCACCTTCTCTTATCAATAATGCCTTTCAACTTATAGGA
ATGTCCTCATGCCTTGATCTTTCTGGATTTTTTGAAAATGAGGATGTTTCTGAGAGGAAG
ATCAGGTTCACATCTAATCTCTCTCCAAAAGAATTGCTAGATAGGATTGAGAATTTAGCA
GTTCAAATGGGATTTCAAGTCCAGAAAAAATCTGGAAAGTTAAAATTATTGCTAGAGAAC
AAAGGTCAAAAAACACAAGCCAGTCTTTCAATAGTAGCAGAGGTTTTTGAGATTAGTATA
TCCTTGTATGTTGTAGAGTTACAAAAATCTTCCGGGGATTCTGCAGTATATAGACAGTTG
TGTAATAGATTATCAGATGAATTGGGAGTCCAGCAAAGTGAAGAACTACTGACAAATCTA
ATTGTGAAAGATGGAAATCATACCAGTGAGTAA