Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400011665
CDS Infomation

pacid=37449388 polypeptide=PGSC0003DMP400008108 locus=PGSC0003DMG400004585 ID=PGSC0003DMT400011665.v4.03 annot-version=v4.03
Sequence

ATGGAAGAGTTGAAGCACAAGTCGAAGAGAGAGGACGAGTCGAAGAAGCGCCACCGTGAT
AAGGAGGATCGAGATCGTGAAAAGAAGGACAGAGACCATCACCATCGTGATAAGAAGGAT
CGAGAGAGAGAGAAAAGCAGTCGCTATGAAAGGGAGAAAAGTGCTGATAGAGATAGGGCA
AAGCACAAGGATAGGCACAGTAGAGGAGATAAGGAGCGTGAAAAGAGCAGCAAGGTTCGT
GATGATGATGAAAGACCTAGAGATAAAGTTAAAGAGCGAGAAAAGGATAAGGAAGATCGT
GAAGAAAGAGAGAGGGAGAAAGAGAGGGAAAGGGAGAAGGAGAGGGAACGTGAGAGGAAA
AGAGATAGAGAGAGGAGAGAAAGGGAGAAGGAGAAGGAGAGGAATCGCGAAAAGGATAGA
CACCGGGAAGTATATGAAAAGGGGAGTGATGATGAAGTTGATGCGAAGGATCGTGAAAGG
AAGAGGCGAAAGAGGGATAATGATGATCATCATAAGGAGAGGGATCGTGAAAGGAGTAGC
AGACCAAACAACAGGCTAAGGGAAGAGAGCACTGATGAAGTATCAGCTGAAAAGGATCAG
AAGAGTCGAGAAGAGGATCTAGCTGAGGAGCAAAGGAAATTAGATGACGAGATGGAGAAG
CGAAGGAGGAGAGTTCAGGAATGGCAAGAGCTAAAAAGAAAAAAAGAGGAGTCTGAGAGG
GAGACACTTGGGGTTGATGCAGGTGCTGAAGAACCTAAGCTGGGCAAGACTTGGACATTG
GATGGTGAGTCTGATGATGAAGATGCTGAGGGGAAAACTGGCATGGATATTGATATGGAT
GATAGTGGCAAGGTCATGGACGACGAAATTGGAGCTGACAAGGTGGTTAGTTCTAGCATT
GGATCTGATTCCCCTGTTATTCAGAATGGCGGTGATGGTTTAGTTGACGATGATGAGATT
GACCCGTTGGATGCTTTTATGAACGATATGGTTTTGCCTGAAGTTGAGAAGCTTAACAAA
TCCGTAGTCAACAGTTTGGATGGTGAAAATTCCAGTTTGAAAGAGAAAAACGGTCTGAGG
AAGGAAGAAAAGCCTAAGATGAGCATGAAGAAAACCATGGGAAGAATTATCCCTGGTGAA
GATTCGGATTCAGATTATGGGAACGTTGAGAATGATGAAGATCCTTTGGAGGAAGAAGAT
GATGAAGAATTTATGAAACGGGTGAAGAAAACCAAGGCTGAGAAACTATCATTAGTGGAT
CATTCGAAGATTGAATATCCTCCTTTCAGAAAGAACTTCTACATAGAAGTTAAGGAGATT
TCAAGAATCAGTGCTGAAGAGGTTTCTACTTACAGGAAACAACTGGAATTGAAGATCCAT
GGCAAGGATGTTCCGAAACCAATCAAAACATGGCATCAGACTGGACTGTCCTCCAAGATG
CTAGACACTATTAAGAAGCTGAATTATGAGAAGCCCATGTCTATTCAAGCTCAGGCTCTG
CCAGTAATTATGAGTGGCCGAGATTGTATTGGGATTGCTAAGACAGGTTCTGGTAAAACT
CTGGCATTTGTATTACCAATGCTGAGACATATTAAGGACCAGCCTCCTCTGATGTCTGGA
GATGGTCCTATTGGGCTAATAATGGCCCCTACTAGAGAGCTTGTACAGCAAATTCATAGT
GATATTAAGAAGTTTGCGAGAGTGATGGGTCTCACCTGTGTACCTGTGTATGGAGGTTCT
GGTGTTGCTCAACAAATTAGTGAATTGAAACGAGGAGCCGAAATTGTTGTGTGCACTCCA
GGTCGGATGATTGATATACTCTGTACAAGTGGTGGGAAGATTACAAATCTGCGAAGAGTC
ACGTATTTGGTCATGGATGAAGCTGATCGGATGTTTGATATGGGATTTGAACCTCAGATC
ACAAGAATTGTCCAAAACACTCGGCCAGACCGTCAAACAGTCCTGTTCTCTGCAACTTTT
CCTCGTCAGGTTGAAATACTAGCTCGTAAAGTGTTGAACAAGCCTGTTGAAATACAGGTA
GGTGGTAGGAGTGTTGTGAACAAGGATATAACACAATTGGTTGAGGTGAGGCCAGAAAGT
GATAGATTCCTTCGGCTTCTTGAGTTACTTGGTGAATGGTATGAAAAAGGTAAAATTTTG
ATATTTGTTCACACACAGGAGAAATGTGATGCTTTATTTAGAGATATGATCAAGCATGGT
TATCCCTGTCTCTCCCTTCATGGGGCAAAAGATCAGACTGATCGTGAGTCCACCATATCC
GACTTTAAAAGTAATGTATGTAATTTGTTGATTGCTACCAGTATAGCAGCCAGGGGCTTA
GATGTCAAGGAGCTTGAACTGGTAATCAATTATGATGTTCCGAACCATTATGAGGACTAT
GTTCATCGTGTTGGGCGGACTGGTCGAGCTGGTAAGAAAGGTTGTGCCATCACATTCATA
TCCGAAGATGATGCAAGATATGCACCTGATCTTCTAAAAGCTTTACAATTGTCGGAGCAA
GTTGTTCCAGATGACCTGAAAGCTCTTGCTGATGGTTTCATGGCAAAGGTTAATCAGGGA
CTTGAGCAAGCACATGGGACTGGTTATGGTGGTAGTGGTTTTAAATTTAATGAAGAAGAG
GATGAAGTGAGAAGAGCAGCCAAAAAAGCACAGGCAAAGGAATATGGATTTGAGGAAGAT
AAATCAGATTCAGAGGATGAAGATGAAGGAATTAGAAAAGCAGGTGGTGACCTCTCTCAG
CAGGCTGCCCTTGCTCAGGCTGCTGCTCTTGTTGCTGCTTCCAAAGCGAGTATGGCTTCA
GCAGCAGCTCCAGTTTCAGCTGGTCAGCTTCTTCCCAATGGTGGATTACCTGTTGCATTG
CCTGGTGTACTTGGTATTAATATACCAGGTGCAACAGCAGTTGCTGCTGGAAATGGACTA
TCAATTGGCTCTAATGATGTGACAGCCAGAGCAACAGCATTGGCAGCTGCCTTGAACTTG
CAGCATAACTTGGCAAAGATTCAGGCCGATGCAATGCCTGAACATTATGAAGCAGAATTA
GAGATAAATGATTTTCCTCAAAATGCTCGTTGGAAGGTTACACACAAGGAGACGTTGGGT
CCTATTTCTGAATGGACAGGAGCTGCCATCACCACTCGAGGACAGTATGTTCCACCTGGC
AAGGTACCAGGGTTTGGGGAAAGGAAGCTGTACTTGTTCATTGAAGGCCCTACGGAGCAA
TCTGTCAAGAGAGCAAAAGCAGAATTAAAACGTGTATTGGAGGACATTACCATGCAAGCA
TCATCACTTCCTGGTTCGGCGCAACCGGGCAGATACTCAGTTGTATAA

Peptide Sequence

PEP ID

PGSC0003DMP400008108
PEP Infomation

pacid=37449388 transcript=PGSC0003DMT400011665 locus=PGSC0003DMG400004585 ID=PGSC0003DMT400011665.v4.03 annot-version=v4.03
Sequence

MEELKHKSKREDESKKRHRDKEDRDREKKDRDHHHRDKKDREREKSSRYEREKSADRDRA
KHKDRHSRGDKEREKSSKVRDDDERPRDKVKEREKDKEDREEREREKEREREKERERERK
RDRERREREKEKERNREKDRHREVYEKGSDDEVDAKDRERKRRKRDNDDHHKERDRERSS
RPNNRLREESTDEVSAEKDQKSREEDLAEEQRKLDDEMEKRRRRVQEWQELKRKKEESER
ETLGVDAGAEEPKLGKTWTLDGESDDEDAEGKTGMDIDMDDSGKVMDDEIGADKVVSSSI
GSDSPVIQNGGDGLVDDDEIDPLDAFMNDMVLPEVEKLNKSVVNSLDGENSSLKEKNGLR
KEEKPKMSMKKTMGRIIPGEDSDSDYGNVENDEDPLEEEDDEEFMKRVKKTKAEKLSLVD
HSKIEYPPFRKNFYIEVKEISRISAEEVSTYRKQLELKIHGKDVPKPIKTWHQTGLSSKM
LDTIKKLNYEKPMSIQAQALPVIMSGRDCIGIAKTGSGKTLAFVLPMLRHIKDQPPLMSG
DGPIGLIMAPTRELVQQIHSDIKKFARVMGLTCVPVYGGSGVAQQISELKRGAEIVVCTP
GRMIDILCTSGGKITNLRRVTYLVMDEADRMFDMGFEPQITRIVQNTRPDRQTVLFSATF
PRQVEILARKVLNKPVEIQVGGRSVVNKDITQLVEVRPESDRFLRLLELLGEWYEKGKIL
IFVHTQEKCDALFRDMIKHGYPCLSLHGAKDQTDRESTISDFKSNVCNLLIATSIAARGL
DVKELELVINYDVPNHYEDYVHRVGRTGRAGKKGCAITFISEDDARYAPDLLKALQLSEQ
VVPDDLKALADGFMAKVNQGLEQAHGTGYGGSGFKFNEEEDEVRRAAKKAQAKEYGFEED
KSDSEDEDEGIRKAGGDLSQQAALAQAAALVAASKASMASAAAPVSAGQLLPNGGLPVAL
PGVLGINIPGATAVAAGNGLSIGSNDVTARATALAAALNLQHNLAKIQADAMPEHYEAEL
EINDFPQNARWKVTHKETLGPISEWTGAAITTRGQYVPPGKVPGFGERKLYLFIEGPTEQ
SVKRAKAELKRVLEDITMQASSLPGSAQPGRYSVV*

Transcript Sequence

Transcript ID

PGSC0003DMT400011665
Transcript Infomation

pacid=37449388 locus=PGSC0003DMG400004585 ID=PGSC0003DMT400011665.v4.03 annot-version=v4.03
Sequence

ATGGAAGAGTTGAAGCACAAGTCGAAGAGAGAGGACGAGTCGAAGAAGCGCCACCGTGAT
AAGGAGGATCGAGATCGTGAAAAGAAGGACAGAGACCATCACCATCGTGATAAGAAGGAT
CGAGAGAGAGAGAAAAGCAGTCGCTATGAAAGGGAGAAAAGTGCTGATAGAGATAGGGCA
AAGCACAAGGATAGGCACAGTAGAGGAGATAAGGAGCGTGAAAAGAGCAGCAAGGTTCGT
GATGATGATGAAAGACCTAGAGATAAAGTTAAAGAGCGAGAAAAGGATAAGGAAGATCGT
GAAGAAAGAGAGAGGGAGAAAGAGAGGGAAAGGGAGAAGGAGAGGGAACGTGAGAGGAAA
AGAGATAGAGAGAGGAGAGAAAGGGAGAAGGAGAAGGAGAGGAATCGCGAAAAGGATAGA
CACCGGGAAGTATATGAAAAGGGGAGTGATGATGAAGTTGATGCGAAGGATCGTGAAAGG
AAGAGGCGAAAGAGGGATAATGATGATCATCATAAGGAGAGGGATCGTGAAAGGAGTAGC
AGACCAAACAACAGGCTAAGGGAAGAGAGCACTGATGAAGTATCAGCTGAAAAGGATCAG
AAGAGTCGAGAAGAGGATCTAGCTGAGGAGCAAAGGAAATTAGATGACGAGATGGAGAAG
CGAAGGAGGAGAGTTCAGGAATGGCAAGAGCTAAAAAGAAAAAAAGAGGAGTCTGAGAGG
GAGACACTTGGGGTTGATGCAGGTGCTGAAGAACCTAAGCTGGGCAAGACTTGGACATTG
GATGGTGAGTCTGATGATGAAGATGCTGAGGGGAAAACTGGCATGGATATTGATATGGAT
GATAGTGGCAAGGTCATGGACGACGAAATTGGAGCTGACAAGGTGGTTAGTTCTAGCATT
GGATCTGATTCCCCTGTTATTCAGAATGGCGGTGATGGTTTAGTTGACGATGATGAGATT
GACCCGTTGGATGCTTTTATGAACGATATGGTTTTGCCTGAAGTTGAGAAGCTTAACAAA
TCCGTAGTCAACAGTTTGGATGGTGAAAATTCCAGTTTGAAAGAGAAAAACGGTCTGAGG
AAGGAAGAAAAGCCTAAGATGAGCATGAAGAAAACCATGGGAAGAATTATCCCTGGTGAA
GATTCGGATTCAGATTATGGGAACGTTGAGAATGATGAAGATCCTTTGGAGGAAGAAGAT
GATGAAGAATTTATGAAACGGGTGAAGAAAACCAAGGCTGAGAAACTATCATTAGTGGAT
CATTCGAAGATTGAATATCCTCCTTTCAGAAAGAACTTCTACATAGAAGTTAAGGAGATT
TCAAGAATCAGTGCTGAAGAGGTTTCTACTTACAGGAAACAACTGGAATTGAAGATCCAT
GGCAAGGATGTTCCGAAACCAATCAAAACATGGCATCAGACTGGACTGTCCTCCAAGATG
CTAGACACTATTAAGAAGCTGAATTATGAGAAGCCCATGTCTATTCAAGCTCAGGCTCTG
CCAGTAATTATGAGTGGCCGAGATTGTATTGGGATTGCTAAGACAGGTTCTGGTAAAACT
CTGGCATTTGTATTACCAATGCTGAGACATATTAAGGACCAGCCTCCTCTGATGTCTGGA
GATGGTCCTATTGGGCTAATAATGGCCCCTACTAGAGAGCTTGTACAGCAAATTCATAGT
GATATTAAGAAGTTTGCGAGAGTGATGGGTCTCACCTGTGTACCTGTGTATGGAGGTTCT
GGTGTTGCTCAACAAATTAGTGAATTGAAACGAGGAGCCGAAATTGTTGTGTGCACTCCA
GGTCGGATGATTGATATACTCTGTACAAGTGGTGGGAAGATTACAAATCTGCGAAGAGTC
ACGTATTTGGTCATGGATGAAGCTGATCGGATGTTTGATATGGGATTTGAACCTCAGATC
ACAAGAATTGTCCAAAACACTCGGCCAGACCGTCAAACAGTCCTGTTCTCTGCAACTTTT
CCTCGTCAGGTTGAAATACTAGCTCGTAAAGTGTTGAACAAGCCTGTTGAAATACAGGTA
GGTGGTAGGAGTGTTGTGAACAAGGATATAACACAATTGGTTGAGGTGAGGCCAGAAAGT
GATAGATTCCTTCGGCTTCTTGAGTTACTTGGTGAATGGTATGAAAAAGGTAAAATTTTG
ATATTTGTTCACACACAGGAGAAATGTGATGCTTTATTTAGAGATATGATCAAGCATGGT
TATCCCTGTCTCTCCCTTCATGGGGCAAAAGATCAGACTGATCGTGAGTCCACCATATCC
GACTTTAAAAGTAATGTATGTAATTTGTTGATTGCTACCAGTATAGCAGCCAGGGGCTTA
GATGTCAAGGAGCTTGAACTGGTAATCAATTATGATGTTCCGAACCATTATGAGGACTAT
GTTCATCGTGTTGGGCGGACTGGTCGAGCTGGTAAGAAAGGTTGTGCCATCACATTCATA
TCCGAAGATGATGCAAGATATGCACCTGATCTTCTAAAAGCTTTACAATTGTCGGAGCAA
GTTGTTCCAGATGACCTGAAAGCTCTTGCTGATGGTTTCATGGCAAAGGTTAATCAGGGA
CTTGAGCAAGCACATGGGACTGGTTATGGTGGTAGTGGTTTTAAATTTAATGAAGAAGAG
GATGAAGTGAGAAGAGCAGCCAAAAAAGCACAGGCAAAGGAATATGGATTTGAGGAAGAT
AAATCAGATTCAGAGGATGAAGATGAAGGAATTAGAAAAGCAGGTGGTGACCTCTCTCAG
CAGGCTGCCCTTGCTCAGGCTGCTGCTCTTGTTGCTGCTTCCAAAGCGAGTATGGCTTCA
GCAGCAGCTCCAGTTTCAGCTGGTCAGCTTCTTCCCAATGGTGGATTACCTGTTGCATTG
CCTGGTGTACTTGGTATTAATATACCAGGTGCAACAGCAGTTGCTGCTGGAAATGGACTA
TCAATTGGCTCTAATGATGTGACAGCCAGAGCAACAGCATTGGCAGCTGCCTTGAACTTG
CAGCATAACTTGGCAAAGATTCAGGCCGATGCAATGCCTGAACATTATGAAGCAGAATTA
GAGATAAATGATTTTCCTCAAAATGCTCGTTGGAAGGTTACACACAAGGAGACGTTGGGT
CCTATTTCTGAATGGACAGGAGCTGCCATCACCACTCGAGGACAGTATGTTCCACCTGGC
AAGGTACCAGGGTTTGGGGAAAGGAAGCTGTACTTGTTCATTGAAGGCCCTACGGAGCAA
TCTGTCAAGAGAGCAAAAGCAGAATTAAAACGTGTATTGGAGGACATTACCATGCAAGCA
TCATCACTTCCTGGTTCGGCGCAACCGGGCAGATACTCAGTTGTATAA