Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400011664
CDS Infomation

pacid=37446259 polypeptide=PGSC0003DMP400008107 locus=PGSC0003DMG400004584 ID=PGSC0003DMT400011664.v4.03 annot-version=v4.03
Sequence

ATGTCTTACCAAAGGGCTGAGAGATTGGGTTACATGAGTCTTGATGAAGAGATGGCAGAT
ACGATAGATGAATTTGAAGAGGTATTCTACAACGAGGACACAAACCTTGATGACTTTGAG
ATGGTAACAGAAGGGACAGATACATCCGCTGCACAAGCAAGGAAAGGCAAAGATATACAA
GGTATCCCATGGGAGAGATTGAATATAACGAGGCAAAGCTACAGATTGACAAGGCTCGAA
CAATACAGGAATTATGAGAACATACCTTTGTCAGGAGATGCTGTAGATAAGGAATGCAAA
CAGGTGAAGAAAGGTGGCAACTTCTATGATTTCTTTTACAATACAAGATTAGTGAAGCCT
ACCATACTTCATTTTCAGCTAAGGAACTTGGTTTGGGCTACTTCAAAACATGATGTGTAT
CTTATATCGAACTACTCACTTATGCACTGGTCATCCATTTCCAACAACTTAACTGAAGTC
CTTGATTTCTCTGGACATATAGCACCGTCAGAGAAACATGCAGGAAGTTTGTTAGAAGGT
CTAACACAAACACAGATCAGCACAATGGCAGTGAAGAATCGCTTTGTTGTCGCAGGGGGC
TTCCAAGGGGAACTCGTTTGTAAGTGTTTGGACAAGCCAGGTATCAGCTTCTGTGCAAGG
ACCACTTATGAGGATAATGCTATTACAAATGCTGTCGAGATATATGATAGCTTGAGCGGT
GGGCTTCATTTTATGGCTGCTAATAATGATTGTGGTGTGAGAGAGTATGACATGGAGAAA
TTTCAGCTTATGAACTACTTCCGGTTCCCTTGGCCAGTGAACCATACTTCAATGAGCCCA
GATAGCAAGATTCTTACTGTTGTTGGAGATGATCTCACTGGCTTACTTGTTGATTCTCAA
AATGGAAAGACGGTTGGCTCGATTGTTGGTCATCTAGACTTCTCTTTCGCGTCTGCCTGG
CACCCTGATGGCCGTACCTTTGCAACTGGGAATCAAGACAAAACCTGCCGAATTTGGGAC
ATGAGAAACCTGTCATCACCTACAGCAGTGCTGAAAGGAAACATGGGTGCTGTCCGATCT
ATTCGTTACTCATCAGATGGGCGGTTGTTGGTAGTAGCTGAACCTGCAGATTTTGTCCAC
ATTTACAATGCTGAAGGAGAGTACAAGAAACGTCAAGAAATTGACATGTTTGGCGAGATA
TCTGGTGTATCTCTGAGTCCAGAAGATGAATCTCTTTATATCGGAATCTGGGATCGAACA
TATGCAAGCTTGCTCCAATACAACCGAAGGCGTTCTTCCGTATATGTTGATTTGTTCACA
TAA

Peptide Sequence

PEP ID

PGSC0003DMP400008107
PEP Infomation

pacid=37446259 transcript=PGSC0003DMT400011664 locus=PGSC0003DMG400004584 ID=PGSC0003DMT400011664.v4.03 annot-version=v4.03
Sequence

MSYQRAERLGYMSLDEEMADTIDEFEEVFYNEDTNLDDFEMVTEGTDTSAAQARKGKDIQ
GIPWERLNITRQSYRLTRLEQYRNYENIPLSGDAVDKECKQVKKGGNFYDFFYNTRLVKP
TILHFQLRNLVWATSKHDVYLISNYSLMHWSSISNNLTEVLDFSGHIAPSEKHAGSLLEG
LTQTQISTMAVKNRFVVAGGFQGELVCKCLDKPGISFCARTTYEDNAITNAVEIYDSLSG
GLHFMAANNDCGVREYDMEKFQLMNYFRFPWPVNHTSMSPDSKILTVVGDDLTGLLVDSQ
NGKTVGSIVGHLDFSFASAWHPDGRTFATGNQDKTCRIWDMRNLSSPTAVLKGNMGAVRS
IRYSSDGRLLVVAEPADFVHIYNAEGEYKKRQEIDMFGEISGVSLSPEDESLYIGIWDRT
YASLLQYNRRRSSVYVDLFT*

Transcript Sequence

Transcript ID

PGSC0003DMT400011664
Transcript Infomation

pacid=37446259 locus=PGSC0003DMG400004584 ID=PGSC0003DMT400011664.v4.03 annot-version=v4.03
Sequence

ATGTCTTACCAAAGGGCTGAGAGATTGGGTTACATGAGTCTTGATGAAGAGATGGCAGAT
ACGATAGATGAATTTGAAGAGGTATTCTACAACGAGGACACAAACCTTGATGACTTTGAG
ATGGTAACAGAAGGGACAGATACATCCGCTGCACAAGCAAGGAAAGGCAAAGATATACAA
GGTATCCCATGGGAGAGATTGAATATAACGAGGCAAAGCTACAGATTGACAAGGCTCGAA
CAATACAGGAATTATGAGAACATACCTTTGTCAGGAGATGCTGTAGATAAGGAATGCAAA
CAGGTGAAGAAAGGTGGCAACTTCTATGATTTCTTTTACAATACAAGATTAGTGAAGCCT
ACCATACTTCATTTTCAGCTAAGGAACTTGGTTTGGGCTACTTCAAAACATGATGTGTAT
CTTATATCGAACTACTCACTTATGCACTGGTCATCCATTTCCAACAACTTAACTGAAGTC
CTTGATTTCTCTGGACATATAGCACCGTCAGAGAAACATGCAGGAAGTTTGTTAGAAGGT
CTAACACAAACACAGATCAGCACAATGGCAGTGAAGAATCGCTTTGTTGTCGCAGGGGGC
TTCCAAGGGGAACTCGTTTGTAAGTGTTTGGACAAGCCAGGTATCAGCTTCTGTGCAAGG
ACCACTTATGAGGATAATGCTATTACAAATGCTGTCGAGATATATGATAGCTTGAGCGGT
GGGCTTCATTTTATGGCTGCTAATAATGATTGTGGTGTGAGAGAGTATGACATGGAGAAA
TTTCAGCTTATGAACTACTTCCGGTTCCCTTGGCCAGTGAACCATACTTCAATGAGCCCA
GATAGCAAGATTCTTACTGTTGTTGGAGATGATCTCACTGGCTTACTTGTTGATTCTCAA
AATGGAAAGACGGTTGGCTCGATTGTTGGTCATCTAGACTTCTCTTTCGCGTCTGCCTGG
CACCCTGATGGCCGTACCTTTGCAACTGGGAATCAAGACAAAACCTGCCGAATTTGGGAC
ATGAGAAACCTGTCATCACCTACAGCAGTGCTGAAAGGAAACATGGGTGCTGTCCGATCT
ATTCGTTACTCATCAGATGGGCGGTTGTTGGTAGTAGCTGAACCTGCAGATTTTGTCCAC
ATTTACAATGCTGAAGGAGAGTACAAGAAACGTCAAGAAATTGACATGTTTGGCGAGATA
TCTGGTGTATCTCTGAGTCCAGAAGATGAATCTCTTTATATCGGAATCTGGGATCGAACA
TATGCAAGCTTGCTCCAATACAACCGAAGGCGTTCTTCCGTATATGTTGATTTGTTCACA
TAA