Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400011662
CDS Infomation

pacid=37446824 polypeptide=PGSC0003DMP400008105 locus=PGSC0003DMG400004583 ID=PGSC0003DMT400011662.v4.03 annot-version=v4.03
Sequence

ATGGCGAACGTACCGAGATCATTTTTGCAAGTTGCAGCTAAAGAAGAAGAAGCTGCACCG
CCGCTGCGAGTCGTTCAGATTGAAGGACTGGTCATTCTGAAGATAATAAAGCATTGCAAG
GAGTTTTCCCCAGCTTTGGTCACTGGGCAACTTCTTGGGTTGGATGTCGGAAGTGTTCTT
GAAGTCACAAACTGTTTTCCATTTCCGGTTCGTGAAGAGGATGAGGAGATCGAGGCTGAG
GGCGCTAATTATCAGCTTGAAATGATGAGATGCCTAAGGGAGGTTAATGTTGACAACAAC
ACCGTTGGTTGGTATCAATCAACTTTATTTGGTTCTTTTCAAACTGTTGAATTGATAGAG
ACCTTCATGAATTACCAGGAGAATATTAAACGTTGTGTTTGCATTATTTATGATCCTTCA
AGATCCAACCAAGGTGTCTTAGCATTGAAGGCCTTAAAGCTTTCTGATTCTTTCATGGAA
CTCTATAGGAGTAATAACTTTACTGGAGAGAAGTTGAGAGAAAAGAACCTTTCATGGGTC
GACATCTTCGAAGAGATACCAATTAAGGTTTCAAACTCGGCTCTCATAAGTGCCTTTATG
ACTGAACTTGAACCTGATACACCTGTAACTCAGTGTGACTATGAGCGCCTACAATTGTCA
ACCAATCCATATTTGGAAAGGAATGTTGAATTTTTGATTGAGTGTATGGATGACTTGTCA
ATGGAGCAGCAAAAGTTCCAATTTTACTATCGGAACCTTTCCCGTCAACAAGCTCAGCAG
CAAGCTTGGCTTCAAAAGAGGAGGTCTGACAACATGGCACGTAAAGCTGCTGGAGAAGAG
CCACTGCCGGAGGAGGATCCTTCTAATCCTGCCTTTAAGCCAATCCCAGAACCCTCACGA
TTGGACAGCTTTCTCATAACTAATCAAATAGCGAACTACTGCAACCAGATTAACGGTGTT
GCTGGACAGAGCTTCAGTAGACTATATCTGATGAAGGCTCTTCAAGAGAACTGA

Peptide Sequence

PEP ID

PGSC0003DMP400008105
PEP Infomation

pacid=37446824 transcript=PGSC0003DMT400011662 locus=PGSC0003DMG400004583 ID=PGSC0003DMT400011662.v4.03 annot-version=v4.03
Sequence

MANVPRSFLQVAAKEEEAAPPLRVVQIEGLVILKIIKHCKEFSPALVTGQLLGLDVGSVL
EVTNCFPFPVREEDEEIEAEGANYQLEMMRCLREVNVDNNTVGWYQSTLFGSFQTVELIE
TFMNYQENIKRCVCIIYDPSRSNQGVLALKALKLSDSFMELYRSNNFTGEKLREKNLSWV
DIFEEIPIKVSNSALISAFMTELEPDTPVTQCDYERLQLSTNPYLERNVEFLIECMDDLS
MEQQKFQFYYRNLSRQQAQQQAWLQKRRSDNMARKAAGEEPLPEEDPSNPAFKPIPEPSR
LDSFLITNQIANYCNQINGVAGQSFSRLYLMKALQEN*

Transcript Sequence

Transcript ID

PGSC0003DMT400011662
Transcript Infomation

pacid=37446824 locus=PGSC0003DMG400004583 ID=PGSC0003DMT400011662.v4.03 annot-version=v4.03
Sequence

ATGGCGAACGTACCGAGATCATTTTTGCAAGTTGCAGCTAAAGAAGAAGAAGCTGCACCG
CCGCTGCGAGTCGTTCAGATTGAAGGACTGGTCATTCTGAAGATAATAAAGCATTGCAAG
GAGTTTTCCCCAGCTTTGGTCACTGGGCAACTTCTTGGGTTGGATGTCGGAAGTGTTCTT
GAAGTCACAAACTGTTTTCCATTTCCGGTTCGTGAAGAGGATGAGGAGATCGAGGCTGAG
GGCGCTAATTATCAGCTTGAAATGATGAGATGCCTAAGGGAGGTTAATGTTGACAACAAC
ACCGTTGGTTGGTATCAATCAACTTTATTTGGTTCTTTTCAAACTGTTGAATTGATAGAG
ACCTTCATGAATTACCAGGAGAATATTAAACGTTGTGTTTGCATTATTTATGATCCTTCA
AGATCCAACCAAGGTGTCTTAGCATTGAAGGCCTTAAAGCTTTCTGATTCTTTCATGGAA
CTCTATAGGAGTAATAACTTTACTGGAGAGAAGTTGAGAGAAAAGAACCTTTCATGGGTC
GACATCTTCGAAGAGATACCAATTAAGGTTTCAAACTCGGCTCTCATAAGTGCCTTTATG
ACTGAACTTGAACCTGATACACCTGTAACTCAGTGTGACTATGAGCGCCTACAATTGTCA
ACCAATCCATATTTGGAAAGGAATGTTGAATTTTTGATTGAGTGTATGGATGACTTGTCA
ATGGAGCAGCAAAAGTTCCAATTTTACTATCGGAACCTTTCCCGTCAACAAGCTCAGCAG
CAAGCTTGGCTTCAAAAGAGGAGGTCTGACAACATGGCACGTAAAGCTGCTGGAGAAGAG
CCACTGCCGGAGGAGGATCCTTCTAATCCTGCCTTTAAGCCAATCCCAGAACCCTCACGA
TTGGACAGCTTTCTCATAACTAATCAAATAGCGAACTACTGCAACCAGATTAACGGTGTT
GCTGGACAGAGCTTCAGTAGACTATATCTGATGAAGGCTCTTCAAGAGAACTGA