Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400011514
CDS Infomation

pacid=37463556 polypeptide=PGSC0003DMP400008000 locus=PGSC0003DMG400004527 ID=PGSC0003DMT400011514.v4.03 annot-version=v4.03
Sequence

ATGGCCAACACATACCTTCAAGTTTTATGCTTATTTATTTGTTCATTGGCTATCATCAAT
ACTGTGTCATCTACAAAAGAAAATGTGACACCGTACTTAGATGAGGCATATCATGTCTCA
AAAACAATCGTTAAAAATGCTGTGTCAAAAGGAGCAGTGTGCTTGGATGGATCACCTCCA
GCATATCATTTTGAACCAGGATTTGGAGATGGAGCCCAAACCTGGCTCGTTCAACTTTCG
GGGGGAGAATGGTGCAGAACCGTTGAAGCTTGTCTAGAACGTTCCAAATCTGAATTTGGT
TCTTCAAATCTTATGAATTCATGGTGGTTTACAGGAATGTTTAGCAAGAATCAAAGTGGA
AATCCAGAATTCTACAATTGGAACAAAGTATTTATTAGATACTGTGATGGTGGAGGATTC
ACTGGAGATGTCGAATACGTCGATCCCGCTACCAAACTTCATTTCAGAGGTGCAAGAATA
TTTAAGGCAGTGATGGATGAACTTTTAGAAAAAGGATTAAAAACGGCCAAAAGTGCTCTT
CTTGGTGGAAGTTCTGCAGGAGGATTTCCAGCAATGTTATATTGTGATTATTTTCGTACA
TTATTGCCAAATACTCCTAGAGTGAAATGTATGAATGATGCTGGTTATTTTATCAACGCC
AAGGAGCCTTTTCGTGCAAATTTTACAGAACTTTATACAGCACTTGTTACTTTACATGGA
TCTGCCAAGGCGTTACCTAAAGAATGCACTTCAAAGATGAGTCCAGAATTGTGCTTCTTC
CCAGAGAACATGCAACAATATGTCAAGACACCCCTTTTCATTGCCTCTTCAGCATATGAT
AAATATCAGATAAACAATAGTATAGCTGTTGGGATAAATACTTGCATTGGTTCTTCAAAT
TGCACTGCAACTACGAACCAAACCTTTTTAGAGTTTAGATCGCGATTCTTGAATGCTTTG
CCCAAACCAACTAACCCAAAATTAAAAGGAGTTTTCATTGATTCATTCAATCATCATAGC
CAAGTCCAATTTTGGTGGTCTCCTTTTAATATCACCACAATTAACAACTTGACTCTATCG
AAGGCATTTGCTGATTGGTTCTACGATCGGAACTACACGTATGTGATACATGAACATGAA
TTGCCGATTTCTGCTCTAGGAGCACTTGCAGAAAAGGAACGTAAAGCCAAATTAAAGAAG
AACATGCGCCATCTACCAAAGTTTCATTAA

Peptide Sequence

PEP ID

PGSC0003DMP400008000
PEP Infomation

pacid=37463556 transcript=PGSC0003DMT400011514 locus=PGSC0003DMG400004527 ID=PGSC0003DMT400011514.v4.03 annot-version=v4.03
Sequence

MANTYLQVLCLFICSLAIINTVSSTKENVTPYLDEAYHVSKTIVKNAVSKGAVCLDGSPP
AYHFEPGFGDGAQTWLVQLSGGEWCRTVEACLERSKSEFGSSNLMNSWWFTGMFSKNQSG
NPEFYNWNKVFIRYCDGGGFTGDVEYVDPATKLHFRGARIFKAVMDELLEKGLKTAKSAL
LGGSSAGGFPAMLYCDYFRTLLPNTPRVKCMNDAGYFINAKEPFRANFTELYTALVTLHG
SAKALPKECTSKMSPELCFFPENMQQYVKTPLFIASSAYDKYQINNSIAVGINTCIGSSN
CTATTNQTFLEFRSRFLNALPKPTNPKLKGVFIDSFNHHSQVQFWWSPFNITTINNLTLS
KAFADWFYDRNYTYVIHEHELPISALGALAEKERKAKLKKNMRHLPKFH*

Transcript Sequence

Transcript ID

PGSC0003DMT400011514
Transcript Infomation

pacid=37463556 locus=PGSC0003DMG400004527 ID=PGSC0003DMT400011514.v4.03 annot-version=v4.03
Sequence

ATGGCCAACACATACCTTCAAGTTTTATGCTTATTTATTTGTTCATTGGCTATCATCAAT
ACTGTGTCATCTACAAAAGAAAATGTGACACCGTACTTAGATGAGGCATATCATGTCTCA
AAAACAATCGTTAAAAATGCTGTGTCAAAAGGAGCAGTGTGCTTGGATGGATCACCTCCA
GCATATCATTTTGAACCAGGATTTGGAGATGGAGCCCAAACCTGGCTCGTTCAACTTTCG
GGGGGAGAATGGTGCAGAACCGTTGAAGCTTGTCTAGAACGTTCCAAATCTGAATTTGGT
TCTTCAAATCTTATGAATTCATGGTGGTTTACAGGAATGTTTAGCAAGAATCAAAGTGGA
AATCCAGAATTCTACAATTGGAACAAAGTATTTATTAGATACTGTGATGGTGGAGGATTC
ACTGGAGATGTCGAATACGTCGATCCCGCTACCAAACTTCATTTCAGAGGTGCAAGAATA
TTTAAGGCAGTGATGGATGAACTTTTAGAAAAAGGATTAAAAACGGCCAAAAGTGCTCTT
CTTGGTGGAAGTTCTGCAGGAGGATTTCCAGCAATGTTATATTGTGATTATTTTCGTACA
TTATTGCCAAATACTCCTAGAGTGAAATGTATGAATGATGCTGGTTATTTTATCAACGCC
AAGGAGCCTTTTCGTGCAAATTTTACAGAACTTTATACAGCACTTGTTACTTTACATGGA
TCTGCCAAGGCGTTACCTAAAGAATGCACTTCAAAGATGAGTCCAGAATTGTGCTTCTTC
CCAGAGAACATGCAACAATATGTCAAGACACCCCTTTTCATTGCCTCTTCAGCATATGAT
AAATATCAGATAAACAATAGTATAGCTGTTGGGATAAATACTTGCATTGGTTCTTCAAAT
TGCACTGCAACTACGAACCAAACCTTTTTAGAGTTTAGATCGCGATTCTTGAATGCTTTG
CCCAAACCAACTAACCCAAAATTAAAAGGAGTTTTCATTGATTCATTCAATCATCATAGC
CAAGTCCAATTTTGGTGGTCTCCTTTTAATATCACCACAATTAACAACTTGACTCTATCG
AAGGCATTTGCTGATTGGTTCTACGATCGGAACTACACGTATGTGATACATGAACATGAA
TTGCCGATTTCTGCTCTAGGAGCACTTGCAGAAAAGGAACGTAAAGCCAAATTAAAGAAG
AACATGCGCCATCTACCAAAGTTTCATTAA