Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400011470
CDS Infomation

pacid=37424616 polypeptide=PGSC0003DMP400007972 locus=PGSC0003DMG400004501 ID=PGSC0003DMT400011470.v4.03 annot-version=v4.03
Sequence

ATGACGGCTGGCACCGGCGGTGGAGGATCATCGGGAAGATTACCGACGTGGAAGGAGAGG
GAAAACAATAAGAGAAGAGAGAGGAGAAGAAGAGCTATTGCCGCCAAAATATTTACTGGG
TTACGAACTCAAGGTAACTTCAAACTTCCAAAACACTGCGATAATAACGAGGTCTTGAAA
GCTCTCTGTATTGAAGCTGGTTGGATCGTTGAAGATGATGGCACCACTTATCGTAAGGGA
TACATGCCTCCACCAATTGAAAATGGATGTGCCTCTATGAATATCAGTGCATGTTCATCG
ATTCAGCCTAGCCCAATGTCATCCTCTTTCCCCAGTCCTGTACCTTCTTACCATGCCAGC
CCAACATCATCGTCATTCCCTAGCCCCTCCCGTTGTGACGGGAACCCCTCATCATACATC
CTTCCATTTCTCCATAACTTAGCTTCCATTCCCTCTACTCTGCCACCTCTTCGTATATCT
AATAGTGCCCCTGTTACCCCACCTCTTTCTTCTCCTACCCGAGGTTCAAAGCCCCCCAAA
CCTATCTGGGAATCCCTCTCCAGGTTTCCATTGCATTCTTTCCAGCACCCACTTTTTGCT
GCTTCTGCACCATCAAGTCCCACTCGACGCCGATACTCTAAGCCTGCTACAATTCCAGAA
TGTGATGAGTCTGATGCCGTCTCAGTTGAATCTGCACGCTGGGTCAGCTTCCAGACGGTG
GCAGCTCCAACTTCGCCTACTTTTAACCTTGTAAAACCTCTTCCTCAGCAGAACATTCTC
TTAGATGCCTTAAGTGGACATGGAATGTTTGGCTGGGGCGAAGCAGCAGCTCAAAAGGGA
CATGGCGCTGAATTTGATTTTGAGAGCTGTAAAGTGAAGGCATGGGAAGGTGAGAGAATA
CATGAAGTTGCTGTGGATGATCTAGAGCTCACTCTTGGTAGTGCAAAAGCACGTGCTTAA

Peptide Sequence

PEP ID

PGSC0003DMP400007972
PEP Infomation

pacid=37424616 transcript=PGSC0003DMT400011470 locus=PGSC0003DMG400004501 ID=PGSC0003DMT400011470.v4.03 annot-version=v4.03
Sequence

MTAGTGGGGSSGRLPTWKERENNKRRERRRRAIAAKIFTGLRTQGNFKLPKHCDNNEVLK
ALCIEAGWIVEDDGTTYRKGYMPPPIENGCASMNISACSSIQPSPMSSSFPSPVPSYHAS
PTSSSFPSPSRCDGNPSSYILPFLHNLASIPSTLPPLRISNSAPVTPPLSSPTRGSKPPK
PIWESLSRFPLHSFQHPLFAASAPSSPTRRRYSKPATIPECDESDAVSVESARWVSFQTV
AAPTSPTFNLVKPLPQQNILLDALSGHGMFGWGEAAAQKGHGAEFDFESCKVKAWEGERI
HEVAVDDLELTLGSAKARA*

Transcript Sequence

Transcript ID

PGSC0003DMT400011470
Transcript Infomation

pacid=37424616 locus=PGSC0003DMG400004501 ID=PGSC0003DMT400011470.v4.03 annot-version=v4.03
Sequence

ATGACGGCTGGCACCGGCGGTGGAGGATCATCGGGAAGATTACCGACGTGGAAGGAGAGG
GAAAACAATAAGAGAAGAGAGAGGAGAAGAAGAGCTATTGCCGCCAAAATATTTACTGGG
TTACGAACTCAAGGTAACTTCAAACTTCCAAAACACTGCGATAATAACGAGGTCTTGAAA
GCTCTCTGTATTGAAGCTGGTTGGATCGTTGAAGATGATGGCACCACTTATCGTAAGGGA
TACATGCCTCCACCAATTGAAAATGGATGTGCCTCTATGAATATCAGTGCATGTTCATCG
ATTCAGCCTAGCCCAATGTCATCCTCTTTCCCCAGTCCTGTACCTTCTTACCATGCCAGC
CCAACATCATCGTCATTCCCTAGCCCCTCCCGTTGTGACGGGAACCCCTCATCATACATC
CTTCCATTTCTCCATAACTTAGCTTCCATTCCCTCTACTCTGCCACCTCTTCGTATATCT
AATAGTGCCCCTGTTACCCCACCTCTTTCTTCTCCTACCCGAGGTTCAAAGCCCCCCAAA
CCTATCTGGGAATCCCTCTCCAGGTTTCCATTGCATTCTTTCCAGCACCCACTTTTTGCT
GCTTCTGCACCATCAAGTCCCACTCGACGCCGATACTCTAAGCCTGCTACAATTCCAGAA
TGTGATGAGTCTGATGCCGTCTCAGTTGAATCTGCACGCTGGGTCAGCTTCCAGACGGTG
GCAGCTCCAACTTCGCCTACTTTTAACCTTGTAAAACCTCTTCCTCAGCAGAACATTCTC
TTAGATGCCTTAAGTGGACATGGAATGTTTGGCTGGGGCGAAGCAGCAGCTCAAAAGGGA
CATGGCGCTGAATTTGATTTTGAGAGCTGTAAAGTGAAGGCATGGGAAGGTGAGAGAATA
CATGAAGTTGCTGTGGATGATCTAGAGCTCACTCTTGGTAGTGCAAAAGCACGTGCTTAA