Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400011461
CDS Infomation

pacid=37477842 polypeptide=PGSC0003DMP400007965 locus=PGSC0003DMG400004497 ID=PGSC0003DMT400011461.v4.03 annot-version=v4.03
Sequence

ATGGCTGCTCGCACTATCTTCCTCAAACTCACAAGAAATGCTCGTGGCAGAGAAAGGAGT
CTATTTAGATCCTTTACTACAACAACTGAAGTTGTCTATGAAGACTCCCCAAATTCTTCT
GAGGAAGAAAGGGGCGAAACCCCAGATGATTTGAAGAGCAGAATATTCAGTCTTAGACTA
CCCAAAAGAAGCGCCACCAACGCGCTTCAGAGATGGGTCGGTGAAGGCCGATTAATATCC
ATCTCCGACCTCCGTCACATCTCCAAAGAACTCCGAAAGTCGCGCAGATTTAAGCACGCC
CTTGAGATCTCAGAATGGCTGGTTTACCACAATCAGGATGAAGCATTGGACTCCGACTAT
GCTATCCGCATTGACTTGATGACCAAAGTTTTTGGAATTGATTCTGCTGAACGGTATTTT
GAAGGACTGCCTACCACTGTAAAAACCACTGAAACATGTACTGCTCTCCTCCATTCCTAT
GCTAGTTTGAGACTAACTGAGAAGGCTGAGGACCTCTATGAGAGAATGAAAGAAGCAAAT
CTTTCTCTGAATACTGTCACGTACAATGAAATGATGACTTTGTACATGTCTGTCGGACAG
CTCGAGAAAGTACCTCTTATTGTTGAAGAGATGAAACTTCAAAAGGTTGCACCAGACCTA
TTTACTTATAATCTGTGGGTAAGTTCATGTGCTGCAGCTCTAAACATTGACAAGGTTAGA
CGGATTCTTGATGAAATAAGTCGGGGCTCTGACTCTGGTGAACAATGGATAAGATACATG
AACCTTGTTAACATATACATCACCTCAGGTAACCTTGTAAACTCAGGGTTGAACTCTGTA
GTTGAATCTGAGAAGGGTATCACACAAAGAGAATGGATATCATATGACTTCCTTATTATT
CTCTATGGTGCATTGGGAAATAAAGAGAAGCTTGATCAAATTTGGAAATCCTTACGGATG
ACTAATCAAAAAATGACAAGCAGAAATTATATCTGCATACTTTCATCATATCTCATGCTT
GGGCATATGAAGGAAGCTGGAGAAATTATCGATCAGTGGAAGCTATCTGCAGCAACAGCT
TTTGATCGTTCCAGCTGCAATAGACTTCTAAAAGCATATAAAGAACTTGGGTTGGAAGAG
AGTGCAGTAGATTTCCGGCTTCTTCTAATTCAGAAAGGTTGTGATGAAATAGAGGAATCA
TAG

Peptide Sequence

PEP ID

PGSC0003DMP400007965
PEP Infomation

pacid=37477842 transcript=PGSC0003DMT400011461 locus=PGSC0003DMG400004497 ID=PGSC0003DMT400011461.v4.03 annot-version=v4.03
Sequence

MAARTIFLKLTRNARGRERSLFRSFTTTTEVVYEDSPNSSEEERGETPDDLKSRIFSLRL
PKRSATNALQRWVGEGRLISISDLRHISKELRKSRRFKHALEISEWLVYHNQDEALDSDY
AIRIDLMTKVFGIDSAERYFEGLPTTVKTTETCTALLHSYASLRLTEKAEDLYERMKEAN
LSLNTVTYNEMMTLYMSVGQLEKVPLIVEEMKLQKVAPDLFTYNLWVSSCAAALNIDKVR
RILDEISRGSDSGEQWIRYMNLVNIYITSGNLVNSGLNSVVESEKGITQREWISYDFLII
LYGALGNKEKLDQIWKSLRMTNQKMTSRNYICILSSYLMLGHMKEAGEIIDQWKLSAATA
FDRSSCNRLLKAYKELGLEESAVDFRLLLIQKGCDEIEES*

Transcript Sequence

Transcript ID

PGSC0003DMT400011461
Transcript Infomation

pacid=37477842 locus=PGSC0003DMG400004497 ID=PGSC0003DMT400011461.v4.03 annot-version=v4.03
Sequence

ATGGCTGCTCGCACTATCTTCCTCAAACTCACAAGAAATGCTCGTGGCAGAGAAAGGAGT
CTATTTAGATCCTTTACTACAACAACTGAAGTTGTCTATGAAGACTCCCCAAATTCTTCT
GAGGAAGAAAGGGGCGAAACCCCAGATGATTTGAAGAGCAGAATATTCAGTCTTAGACTA
CCCAAAAGAAGCGCCACCAACGCGCTTCAGAGATGGGTCGGTGAAGGCCGATTAATATCC
ATCTCCGACCTCCGTCACATCTCCAAAGAACTCCGAAAGTCGCGCAGATTTAAGCACGCC
CTTGAGATCTCAGAATGGCTGGTTTACCACAATCAGGATGAAGCATTGGACTCCGACTAT
GCTATCCGCATTGACTTGATGACCAAAGTTTTTGGAATTGATTCTGCTGAACGGTATTTT
GAAGGACTGCCTACCACTGTAAAAACCACTGAAACATGTACTGCTCTCCTCCATTCCTAT
GCTAGTTTGAGACTAACTGAGAAGGCTGAGGACCTCTATGAGAGAATGAAAGAAGCAAAT
CTTTCTCTGAATACTGTCACGTACAATGAAATGATGACTTTGTACATGTCTGTCGGACAG
CTCGAGAAAGTACCTCTTATTGTTGAAGAGATGAAACTTCAAAAGGTTGCACCAGACCTA
TTTACTTATAATCTGTGGGTAAGTTCATGTGCTGCAGCTCTAAACATTGACAAGGTTAGA
CGGATTCTTGATGAAATAAGTCGGGGCTCTGACTCTGGTGAACAATGGATAAGATACATG
AACCTTGTTAACATATACATCACCTCAGGTAACCTTGTAAACTCAGGGTTGAACTCTGTA
GTTGAATCTGAGAAGGGTATCACACAAAGAGAATGGATATCATATGACTTCCTTATTATT
CTCTATGGTGCATTGGGAAATAAAGAGAAGCTTGATCAAATTTGGAAATCCTTACGGATG
ACTAATCAAAAAATGACAAGCAGAAATTATATCTGCATACTTTCATCATATCTCATGCTT
GGGCATATGAAGGAAGCTGGAGAAATTATCGATCAGTGGAAGCTATCTGCAGCAACAGCT
TTTGATCGTTCCAGCTGCAATAGACTTCTAAAAGCATATAAAGAACTTGGGTTGGAAGAG
AGTGCAGTAGATTTCCGGCTTCTTCTAATTCAGAAAGGTTGTGATGAAATAGAGGAATCA
TAG