Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400011375
CDS Infomation

pacid=37458428 polypeptide=PGSC0003DMP400007917 locus=PGSC0003DMG400004456 ID=PGSC0003DMT400011375.v4.03 annot-version=v4.03
Sequence

ATGACTAGAGATAAAATTGATATTCATCAGCATGGTGTGCCAGTTGATCAGAAGAAGTTA
AAAGTTAAGTGCAACTATTGTGGTAAAGTTGTTTCTGGTTTTAGTCGGCTTAAACAACAC
TTGGGAGGCATTCGTGGAGATGTAACTCCTTGCTTGGAAACTCCTATACTTGTGAAAGAA
GCACTTGAAGCTGAGATACTTAATAAGAAAAATGGAAATTTAATCAAGGAAGTTGGGCAA
CTTCAGCACCCAAACCTTCCTTTGAAGAGGAATTGGTGCCCTCGAGATGGTGAACCAAAT
AAGACTTCTGAAAGTGTAAATAAAAAACATAATGGTGTGAATTCAAAAGTAGCTGGTACT
TCTGTTGTAGATTCATCCTCACAAGAGATTTCAAAATCTATAGGGAGATTTTTTTATGAA
GCAGGAATCGACTTAGATGCTATCAGGTTACCTAGCTTCCAAAGGATGGTAAAAGCCACC
CTTAGTCCTGGGAAGACAGTAAAATTCCCCAGTTGTCAGGAGTTGAGAGGGTGGATCCTT
CAGGATGCAGTGAAAGAGATGCAACAGTATGTAATGGAAATTAGAAATTCATGGGCAAGC
ACCGGATGCAGCATCTTGCTAGATGGATGGATAGATTCAAACGGTCGAAATCTGATTAAT
ATCCTAGTGTACTGCCCAAGGGGTACCATTTATCTTCGATCATCAGATATTTCATCTTTC
AATGGGAATGTTGATGCCATGCTATTATTCTTTGAGGAAGTTCTGGAGGAAGTTGGAGTT
GAAACTGTGGTCCAAATAGTTGCATACTCAACGTCTGCCTGCATGATGGAAGTAGGCAAG
AAGCTAATGGAAAAATGTAAGACAGTTTTTTGGACAGTAGATGCTTCTCATTGCATGGAA
CTTATGTTACAGAATTTCACGAAGATAGACCCGATACAAGAAGCTTTGGAGAAGGCAAAG
ACACTCACACAATTTATTTACAGCCATGCTACTGCCCTGAAACTTCTAAGAGATGCTTGT
CCTGATGAGCTTGTGAAGTCTTCAAAGATTAGGTCAATTGTGCCCTTTTTGACTCTGGAA
AACATTGTCTCACAGAAAGACTGCTTAATTAGGATGTTTCAGTCTTCTGATTGGCGTACC
TCAATCATGGCTTCTACGAATGAGGGTAAACGAATATCAAATATGGTTAAAGATGAATCA
TTTTGGAGTGAGGCTTTGATGGCAGTAAAAGCAACCATTCCCCTGGTGGAAGTTATGAAG
TTACTCGATGGTACTAATAAGCCACAAGTTGGTTTTATATATGACACACTAGATCAAGCT
AAAGAGACCATCAAAAAGGAGTTCCAAGACAAGAAATCCCTTTATGCAAAATTCTGGATA
GCCATTGATGACATATGGGACGAATACCTCCACAGTCATCTTCATGCTGCGGGTTACTTT
TTGAACCCAACCCTTTTTTACTCGAGCGATTTCTACACTGATGTGGAAGTTTCCTGTGGT
CTTTGTTGTTGTGTTGTTCGCATGGCAGAAGATCGTCATATACAGGATTTGATCACACTG
CAAATTGATGAGTATCGCATGGGGAGGGGCACGTTTCATTTTGGAAGTTTCAAAGATAAA
CTATCAAATATTTCCCCAGCACTTTGGTGGTCACAATATGGAGTTCAGTTTCCCGAACTT
CAAAGGCTTGCTGTTCGGATCCTTAGTCAGACATGCAATGGTGCTTCACATTATAGGCTG
AAAAGGAGCTTGGTCGAGACATTACATACAGAAGGTATGAATCCGATAGAGAAGCAGAGG
CTGCAGGACTTGGTATTTGTCCACTGTAATTTGCAATTACAAGCTTTTGATCCAGATGGA
AGCAATGACAATACAGACTATGTTGACCCTATGGATGAGTGGATAGTCGGAAAAGAGCCA
AATTTGGTGCCTGAAAACACTCAACTTACATGGATGGACTTGGAACTGGCAAGCAGAAAC
GGAAAGGAAAAAGCTTGTGTTGAAAGAGCTGTTATTTATGTAAAGGAGGAAGCGGAGGAG
GAAGAGGAAAGAGGAAGATAA

Peptide Sequence

PEP ID

PGSC0003DMP400007917
PEP Infomation

pacid=37458428 transcript=PGSC0003DMT400011375 locus=PGSC0003DMG400004456 ID=PGSC0003DMT400011375.v4.03 annot-version=v4.03
Sequence

MTRDKIDIHQHGVPVDQKKLKVKCNYCGKVVSGFSRLKQHLGGIRGDVTPCLETPILVKE
ALEAEILNKKNGNLIKEVGQLQHPNLPLKRNWCPRDGEPNKTSESVNKKHNGVNSKVAGT
SVVDSSSQEISKSIGRFFYEAGIDLDAIRLPSFQRMVKATLSPGKTVKFPSCQELRGWIL
QDAVKEMQQYVMEIRNSWASTGCSILLDGWIDSNGRNLINILVYCPRGTIYLRSSDISSF
NGNVDAMLLFFEEVLEEVGVETVVQIVAYSTSACMMEVGKKLMEKCKTVFWTVDASHCME
LMLQNFTKIDPIQEALEKAKTLTQFIYSHATALKLLRDACPDELVKSSKIRSIVPFLTLE
NIVSQKDCLIRMFQSSDWRTSIMASTNEGKRISNMVKDESFWSEALMAVKATIPLVEVMK
LLDGTNKPQVGFIYDTLDQAKETIKKEFQDKKSLYAKFWIAIDDIWDEYLHSHLHAAGYF
LNPTLFYSSDFYTDVEVSCGLCCCVVRMAEDRHIQDLITLQIDEYRMGRGTFHFGSFKDK
LSNISPALWWSQYGVQFPELQRLAVRILSQTCNGASHYRLKRSLVETLHTEGMNPIEKQR
LQDLVFVHCNLQLQAFDPDGSNDNTDYVDPMDEWIVGKEPNLVPENTQLTWMDLELASRN
GKEKACVERAVIYVKEEAEEEEERGR*

Transcript Sequence

Transcript ID

PGSC0003DMT400011375
Transcript Infomation

pacid=37458428 locus=PGSC0003DMG400004456 ID=PGSC0003DMT400011375.v4.03 annot-version=v4.03
Sequence

ATGACTAGAGATAAAATTGATATTCATCAGCATGGTGTGCCAGTTGATCAGAAGAAGTTA
AAAGTTAAGTGCAACTATTGTGGTAAAGTTGTTTCTGGTTTTAGTCGGCTTAAACAACAC
TTGGGAGGCATTCGTGGAGATGTAACTCCTTGCTTGGAAACTCCTATACTTGTGAAAGAA
GCACTTGAAGCTGAGATACTTAATAAGAAAAATGGAAATTTAATCAAGGAAGTTGGGCAA
CTTCAGCACCCAAACCTTCCTTTGAAGAGGAATTGGTGCCCTCGAGATGGTGAACCAAAT
AAGACTTCTGAAAGTGTAAATAAAAAACATAATGGTGTGAATTCAAAAGTAGCTGGTACT
TCTGTTGTAGATTCATCCTCACAAGAGATTTCAAAATCTATAGGGAGATTTTTTTATGAA
GCAGGAATCGACTTAGATGCTATCAGGTTACCTAGCTTCCAAAGGATGGTAAAAGCCACC
CTTAGTCCTGGGAAGACAGTAAAATTCCCCAGTTGTCAGGAGTTGAGAGGGTGGATCCTT
CAGGATGCAGTGAAAGAGATGCAACAGTATGTAATGGAAATTAGAAATTCATGGGCAAGC
ACCGGATGCAGCATCTTGCTAGATGGATGGATAGATTCAAACGGTCGAAATCTGATTAAT
ATCCTAGTGTACTGCCCAAGGGGTACCATTTATCTTCGATCATCAGATATTTCATCTTTC
AATGGGAATGTTGATGCCATGCTATTATTCTTTGAGGAAGTTCTGGAGGAAGTTGGAGTT
GAAACTGTGGTCCAAATAGTTGCATACTCAACGTCTGCCTGCATGATGGAAGTAGGCAAG
AAGCTAATGGAAAAATGTAAGACAGTTTTTTGGACAGTAGATGCTTCTCATTGCATGGAA
CTTATGTTACAGAATTTCACGAAGATAGACCCGATACAAGAAGCTTTGGAGAAGGCAAAG
ACACTCACACAATTTATTTACAGCCATGCTACTGCCCTGAAACTTCTAAGAGATGCTTGT
CCTGATGAGCTTGTGAAGTCTTCAAAGATTAGGTCAATTGTGCCCTTTTTGACTCTGGAA
AACATTGTCTCACAGAAAGACTGCTTAATTAGGATGTTTCAGTCTTCTGATTGGCGTACC
TCAATCATGGCTTCTACGAATGAGGGTAAACGAATATCAAATATGGTTAAAGATGAATCA
TTTTGGAGTGAGGCTTTGATGGCAGTAAAAGCAACCATTCCCCTGGTGGAAGTTATGAAG
TTACTCGATGGTACTAATAAGCCACAAGTTGGTTTTATATATGACACACTAGATCAAGCT
AAAGAGACCATCAAAAAGGAGTTCCAAGACAAGAAATCCCTTTATGCAAAATTCTGGATA
GCCATTGATGACATATGGGACGAATACCTCCACAGTCATCTTCATGCTGCGGGTTACTTT
TTGAACCCAACCCTTTTTTACTCGAGCGATTTCTACACTGATGTGGAAGTTTCCTGTGGT
CTTTGTTGTTGTGTTGTTCGCATGGCAGAAGATCGTCATATACAGGATTTGATCACACTG
CAAATTGATGAGTATCGCATGGGGAGGGGCACGTTTCATTTTGGAAGTTTCAAAGATAAA
CTATCAAATATTTCCCCAGCACTTTGGTGGTCACAATATGGAGTTCAGTTTCCCGAACTT
CAAAGGCTTGCTGTTCGGATCCTTAGTCAGACATGCAATGGTGCTTCACATTATAGGCTG
AAAAGGAGCTTGGTCGAGACATTACATACAGAAGGTATGAATCCGATAGAGAAGCAGAGG
CTGCAGGACTTGGTATTTGTCCACTGTAATTTGCAATTACAAGCTTTTGATCCAGATGGA
AGCAATGACAATACAGACTATGTTGACCCTATGGATGAGTGGATAGTCGGAAAAGAGCCA
AATTTGGTGCCTGAAAACACTCAACTTACATGGATGGACTTGGAACTGGCAAGCAGAAAC
GGAAAGGAAAAAGCTTGTGTTGAAAGAGCTGTTATTTATGTAAAGGAGGAAGCGGAGGAG
GAAGAGGAAAGAGGAAGATAA