Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400011370
CDS Infomation

pacid=37457050 polypeptide=PGSC0003DMP400007913 locus=PGSC0003DMG400004454 ID=PGSC0003DMT400011370.v4.03 annot-version=v4.03
Sequence

ATGGCGACCTTCAACATCTCATTTCTCACACAACCCCATTCTACACTTCCCATTTTCTCT
TCCCAAAATACCCCTTCTTTCTCCTCATATTCACTTCCCAAAACCTCCTTTCTTTTCCCT
TCCATTACTCTCCGTCCCAAAAGCAGAACCACCACTCGCCACCATGCGAGCATCGTTGTT
GCAGCTCTGAAAAAGCTCTCTGAAACAGACCCTTTAACCGTGCCTCTACAGCCTGATGAA
ATCTCTGGAAGCTTTCCGAAGGAATCTGGTGTATATGCGGTGTATGATACTAATGGTGAT
CTCCAATTTGTTGGCATATCACGCAACATCGCTGCCAGTGTTCTTTCCCATAAGAATTCC
GTACCTCAACTCTGCTCTTCTGTTAAGGTTGGTGTGGTTGATGAGCCAGATAGAACCGCC
TTAACTGAATCTTGGAAATCATGGATGGAAGAACATATTGCGACCAATGGAAAGGTACCA
CCGGGTAATGAACCTGGAAATTCAACATGGGTACGTCAGCCTCCAAAGAAGAAGGCTGAT
CTAAGGTTAACACCAGGCCGTCATGTACAGTTAACAGTGCCCTTGGAGGATCTCATTGAC
CGGCTAGTGAAGGAAAACAAGGTGGTTGCTTTCATTAAAGGGTCAAGAAGTGCACCACAA
TGTGGGTTCTCACAGAGGGTGGTAGCCATTCTCGAAAGTGAAGGTGTTGATTATGAAAGC
ATCGATGTCCTTGATGAAGAGTACAACTCCGGGTTGAGGGAGACGTTGAAGAACTATAGT
AACTGGCCTACATTTCCACAAATTTTTGTGAAGGGTGAGTTGGTTGGTGGGTGTGATATC
TTGACCTCCATGTATGAGAAGGGTGAACTTGCCAGCTTGTTCAAAAGCTAA

Peptide Sequence

PEP ID

PGSC0003DMP400007913
PEP Infomation

pacid=37457050 transcript=PGSC0003DMT400011370 locus=PGSC0003DMG400004454 ID=PGSC0003DMT400011370.v4.03 annot-version=v4.03
Sequence

MATFNISFLTQPHSTLPIFSSQNTPSFSSYSLPKTSFLFPSITLRPKSRTTTRHHASIVV
AALKKLSETDPLTVPLQPDEISGSFPKESGVYAVYDTNGDLQFVGISRNIAASVLSHKNS
VPQLCSSVKVGVVDEPDRTALTESWKSWMEEHIATNGKVPPGNEPGNSTWVRQPPKKKAD
LRLTPGRHVQLTVPLEDLIDRLVKENKVVAFIKGSRSAPQCGFSQRVVAILESEGVDYES
IDVLDEEYNSGLRETLKNYSNWPTFPQIFVKGELVGGCDILTSMYEKGELASLFKS*

Transcript Sequence

Transcript ID

PGSC0003DMT400011370
Transcript Infomation

pacid=37457050 locus=PGSC0003DMG400004454 ID=PGSC0003DMT400011370.v4.03 annot-version=v4.03
Sequence

ATGGCGACCTTCAACATCTCATTTCTCACACAACCCCATTCTACACTTCCCATTTTCTCT
TCCCAAAATACCCCTTCTTTCTCCTCATATTCACTTCCCAAAACCTCCTTTCTTTTCCCT
TCCATTACTCTCCGTCCCAAAAGCAGAACCACCACTCGCCACCATGCGAGCATCGTTGTT
GCAGCTCTGAAAAAGCTCTCTGAAACAGACCCTTTAACCGTGCCTCTACAGCCTGATGAA
ATCTCTGGAAGCTTTCCGAAGGAATCTGGTGTATATGCGGTGTATGATACTAATGGTGAT
CTCCAATTTGTTGGCATATCACGCAACATCGCTGCCAGTGTTCTTTCCCATAAGAATTCC
GTACCTCAACTCTGCTCTTCTGTTAAGGTTGGTGTGGTTGATGAGCCAGATAGAACCGCC
TTAACTGAATCTTGGAAATCATGGATGGAAGAACATATTGCGACCAATGGAAAGGTACCA
CCGGGTAATGAACCTGGAAATTCAACATGGGTACGTCAGCCTCCAAAGAAGAAGGCTGAT
CTAAGGTTAACACCAGGCCGTCATGTACAGTTAACAGTGCCCTTGGAGGATCTCATTGAC
CGGCTAGTGAAGGAAAACAAGGTGGTTGCTTTCATTAAAGGGTCAAGAAGTGCACCACAA
TGTGGGTTCTCACAGAGGGTGGTAGCCATTCTCGAAAGTGAAGGTGTTGATTATGAAAGC
ATCGATGTCCTTGATGAAGAGTACAACTCCGGGTTGAGGGAGACGTTGAAGAACTATAGT
AACTGGCCTACATTTCCACAAATTTTTGTGAAGGGTGAGTTGGTTGGTGGGTGTGATATC
TTGACCTCCATGTATGAGAAGGGTGAACTTGCCAGCTTGTTCAAAAGCTAA