Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400011369
CDS Infomation

pacid=37457791 polypeptide=PGSC0003DMP400007912 locus=PGSC0003DMG400004453 ID=PGSC0003DMT400011369.v4.03 annot-version=v4.03
Sequence

ATGGCACCAGGGTCATCTAGAGCCAACATTAGTGTTGGTTCATTTGAGGCTTTTCTTCAA
GGTTGGTTCTTACGTCAAGAACAATTCTTGAATGAACTTACCATAACACAAACCACACTT
GATGAATCAATTATGAGAAACCTTATTTCGCGTATTTTATCTCATTATCAAGAATATTAC
GAAGAAAAATCAAGAATGTCACATATAAATGTGTTCTACATGTTTTCTCCGTCATGGTTT
ACTCCATTAGAAAAAAGTTTCTTATGGATTGCTGGGTTCAAACCAGGATTAGCTTTTCCC
CTTGTTATGAATTCGGTTAATGATTTAAGTGAAAATCAAATCGAAAGGATTAATAGGCTT
AGAATCGAAACGAGGATCGAAGAGAGGAATCTTATGGACAAATTAGCTAAACTTCAAGAA
AGTGTCGCTGCCCCGCCGTTGATGGGACTTGCGCAGCAGTACGGAATGGAAATGCTTCGA
GACGGAGAAATTACTGAGGTGGATGAGGAGATAGAGATACTAAGAACAGCAGTGGAGAAT
GTAGTGACAGATGCAGATAGATTGAGGACAAGAACAGCAGATAGTGTGGTGGGAATACTA
AATCCTTTGCAAAGTTTGAAGTTTTTGGCAGCAGCAGCACAACTTCAGCTAAGAATAAGG
ATGGTTGGAATGCAGAGAGAAGCAGAGAGGAGACACCAAATGGATACTTCAAATGGTTGG
TAG

Peptide Sequence

PEP ID

PGSC0003DMP400007912
PEP Infomation

pacid=37457791 transcript=PGSC0003DMT400011369 locus=PGSC0003DMG400004453 ID=PGSC0003DMT400011369.v4.03 annot-version=v4.03
Sequence

MAPGSSRANISVGSFEAFLQGWFLRQEQFLNELTITQTTLDESIMRNLISRILSHYQEYY
EEKSRMSHINVFYMFSPSWFTPLEKSFLWIAGFKPGLAFPLVMNSVNDLSENQIERINRL
RIETRIEERNLMDKLAKLQESVAAPPLMGLAQQYGMEMLRDGEITEVDEEIEILRTAVEN
VVTDADRLRTRTADSVVGILNPLQSLKFLAAAAQLQLRIRMVGMQREAERRHQMDTSNGW
*

Transcript Sequence

Transcript ID

PGSC0003DMT400011369
Transcript Infomation

pacid=37457791 locus=PGSC0003DMG400004453 ID=PGSC0003DMT400011369.v4.03 annot-version=v4.03
Sequence

ATGGCACCAGGGTCATCTAGAGCCAACATTAGTGTTGGTTCATTTGAGGCTTTTCTTCAA
GGTTGGTTCTTACGTCAAGAACAATTCTTGAATGAACTTACCATAACACAAACCACACTT
GATGAATCAATTATGAGAAACCTTATTTCGCGTATTTTATCTCATTATCAAGAATATTAC
GAAGAAAAATCAAGAATGTCACATATAAATGTGTTCTACATGTTTTCTCCGTCATGGTTT
ACTCCATTAGAAAAAAGTTTCTTATGGATTGCTGGGTTCAAACCAGGATTAGCTTTTCCC
CTTGTTATGAATTCGGTTAATGATTTAAGTGAAAATCAAATCGAAAGGATTAATAGGCTT
AGAATCGAAACGAGGATCGAAGAGAGGAATCTTATGGACAAATTAGCTAAACTTCAAGAA
AGTGTCGCTGCCCCGCCGTTGATGGGACTTGCGCAGCAGTACGGAATGGAAATGCTTCGA
GACGGAGAAATTACTGAGGTGGATGAGGAGATAGAGATACTAAGAACAGCAGTGGAGAAT
GTAGTGACAGATGCAGATAGATTGAGGACAAGAACAGCAGATAGTGTGGTGGGAATACTA
AATCCTTTGCAAAGTTTGAAGTTTTTGGCAGCAGCAGCACAACTTCAGCTAAGAATAAGG
ATGGTTGGAATGCAGAGAGAAGCAGAGAGGAGACACCAAATGGATACTTCAAATGGTTGG
TAG