Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400011134
CDS Infomation

pacid=37441591 polypeptide=PGSC0003DMP400007747 locus=PGSC0003DMG400004356 ID=PGSC0003DMT400011134.v4.03 annot-version=v4.03
Sequence

ATGGATCGTAGATCATCGATAGAGAGTGAAGGAAGTGTTCATTTAGAGATAAATGGGATG
TTAAGTTTAACAGAAAGTGGTGTTCCAACTATCTTTGAACCTCATAGTACAATTGAGACA
AAGAATAGCAGTACATCAAATTCTGTTTCTCCGAAAAGGGGAGTGGTTCGTGCACCGGAG
AAAAAGATTACTCTTTTTGCTCTAAGGCTAGCAGTGCTTGAAAAGGCAGCAACTGGACTA
GGCACACTTGGTTTCATATGGGCAACAGTTGTGCTTCTTGGTGGCTTTGCGATCACTTTA
GACACAACAGACTTTTGGGTCATAACAACTATTCTGTTGATTGAAGGAACAAGAATCTTT
AGCAGGAGTCATGAGCTTGAGTGGCAGCATCAAGCAACATGGTCTATTGCTGATGTGGGG
ATCAGCAGCTTTCGCGCGATTAAATCAAGTACAAGGAGCATTGTCAAGGCTGCAAAAGCA
GTTTTCAAGCCTTTTTCTGATGTTACAAAGGCAAGCAGTAGGGAAATTGGAAGGAATTCA
CAACAGACAGCTCGTGGGAAATGGGATAAGCGGAGGGTGCCAACACGAATGTGGACTAGT
TCAGAGGTTCCTCTGCTTCCATATGCACGATGGATGTTCATTGCAAGAAATGTTAGTAAG
ATGTTGTACTGGCTCCAAATATTATCTGCAACAGCATGTTTGGTGCTTTCGTTGATGAAG
CTTGTTTTGAGGAACTTTGGTGAAGTGGCCAAAGGAGATACCGATAAGAGGAACAGGAAA
AGTGCTCTACTTATATTCTATTCCCTCGCGTTCACGGAGGCATTGCTTTTTCTCTTGGAA
AAAGCATATTGGGAATGGAAGATCAACTTTTGTAGACTGTTGGAGGAGGTGAACAAAGAA
TGTGAATTGGGGCCATCAGGTATGACTTGTGTTAGGAGGTTCTTTTATGATGCTTATTCA
AGATGTGTTAATGGGAGCATATTTGATGGTCTTAAGATGGACATGGTTTCATTTGCTATG
GAACTCCTAGCCTCTAGCTCACCAGATGAACAGCTTATTGGTGCTCAAATCCTAAGAAAA
TTTGCTACGAGTCCACGATATTGTTATGACACCCTTCAGAAGATTGGAACAGACATAATA
GTAATGGAGAGGTTGGTTGAGATGTTGAATTGGAAAGACATCCAAGAAGAAGAGTTGAGG
CTATCAGCAGCAGAGATCATATCGAAGATTACTGGTAAAAAGCAAAATTCTCTTCGTGTT
GCGGGGATACCTGGTGCTATGGAGTCCATATCTTCACTTCTTCAAATCAGCAGGATGCCA
ACTGGAGCAAGTGATGAAATCTGTGAAAAGAGGATCATCTTTGACAATGAGAACTATGGA
TTTTGGACATTCAATCATTTGGGGCTGCTCATTCTGAAGAAACTTGCTCGCGACCACGAC
AACTGTGGGAAGATTGGCAATACTAGAGGTCTTCTGCCCAAAATCATAGAGTTCACACAA
GCAGGAGAGAGATTACTAAGAGAGGAATCAGCCACACCAACACAGATATTGACGCTAAAA
CGGTCTCTCCAGGTCGTGAAGATGCTTGTAAGCACAGCAGGCGCCACAGGTAAGGAGCTA
AGAAAAGAAATTTCAGAAATAGTCTTCACCATTAGCAATATCAGAGACATATTAAGATAT
GGAGAGGGACACCCTACTTTACAACAATTGGGAATAGAGATCTTGAAAAGTTTGGGATTG
GAGGAAGATGCAACAGAGAGAATTGGAGGCACCGGTGGAATCCTTAAGGAATTGTGCAAT
ATCTTCCTCAAGGAGGCCATGTCAAATCATCATGGTCATGTAAGAACTGCAGCAGGAGAA
GCCTTAGCTATGCTGGCACTTGAAAGCAAGAACAACTGCCATAGGATATTGAAACTGAAG
GTGACTGGCAAGCTTGTCCAAGCATTGGAAGTTCCATTGCTTCGAATAAATGCAGCAAGA
ATCCTGAGAAACTTGTGTGTCTACAGTGGAGAAGGCTACTTTGAAGAATTGAGGGAACTT
GCTTCTGCAGGACCAACTGTACTCAAAGCAATCATGACAGAGGAACACAAGTTACAAGAA
GTAATGATGGGACTAGGCGCGCATATATTCAAGTTTATAACACCAGAGGAATCAATCTTC
ATGTTCCAGAGCACGAAAATTCAAGAATCTGAATTGGCTGCAAAACTTGTTGAGATTCTT
AGGAAGCATCAACATCCATCTATAAAAGTTCCAAGAATTAGGAGGTTTGTCATAGAGTTG
TCAATCTGGATGATGAGGGATAAAAGAACAAACATTCAAGTGTTGGGAAATCTGGGAATG
GAGACGGAGCTCGAGTACATCATAGAAACAACATCAGAGCTAGAGAGCTTTAATGTTTTC
TCAGGAACAGTTGGAATGAATCGACACAGCGTGACAATCCACTCACTGGTGGATACTGCA
ATGAAGTTGTTGGCTGGTGAAAAAGAATGA

Peptide Sequence

PEP ID

PGSC0003DMP400007747
PEP Infomation

pacid=37441591 transcript=PGSC0003DMT400011134 locus=PGSC0003DMG400004356 ID=PGSC0003DMT400011134.v4.03 annot-version=v4.03
Sequence

MDRRSSIESEGSVHLEINGMLSLTESGVPTIFEPHSTIETKNSSTSNSVSPKRGVVRAPE
KKITLFALRLAVLEKAATGLGTLGFIWATVVLLGGFAITLDTTDFWVITTILLIEGTRIF
SRSHELEWQHQATWSIADVGISSFRAIKSSTRSIVKAAKAVFKPFSDVTKASSREIGRNS
QQTARGKWDKRRVPTRMWTSSEVPLLPYARWMFIARNVSKMLYWLQILSATACLVLSLMK
LVLRNFGEVAKGDTDKRNRKSALLIFYSLAFTEALLFLLEKAYWEWKINFCRLLEEVNKE
CELGPSGMTCVRRFFYDAYSRCVNGSIFDGLKMDMVSFAMELLASSSPDEQLIGAQILRK
FATSPRYCYDTLQKIGTDIIVMERLVEMLNWKDIQEEELRLSAAEIISKITGKKQNSLRV
AGIPGAMESISSLLQISRMPTGASDEICEKRIIFDNENYGFWTFNHLGLLILKKLARDHD
NCGKIGNTRGLLPKIIEFTQAGERLLREESATPTQILTLKRSLQVVKMLVSTAGATGKEL
RKEISEIVFTISNIRDILRYGEGHPTLQQLGIEILKSLGLEEDATERIGGTGGILKELCN
IFLKEAMSNHHGHVRTAAGEALAMLALESKNNCHRILKLKVTGKLVQALEVPLLRINAAR
ILRNLCVYSGEGYFEELRELASAGPTVLKAIMTEEHKLQEVMMGLGAHIFKFITPEESIF
MFQSTKIQESELAAKLVEILRKHQHPSIKVPRIRRFVIELSIWMMRDKRTNIQVLGNLGM
ETELEYIIETTSELESFNVFSGTVGMNRHSVTIHSLVDTAMKLLAGEKE*

Transcript Sequence

Transcript ID

PGSC0003DMT400011134
Transcript Infomation

pacid=37441591 locus=PGSC0003DMG400004356 ID=PGSC0003DMT400011134.v4.03 annot-version=v4.03
Sequence

ATGGATCGTAGATCATCGATAGAGAGTGAAGGAAGTGTTCATTTAGAGATAAATGGGATG
TTAAGTTTAACAGAAAGTGGTGTTCCAACTATCTTTGAACCTCATAGTACAATTGAGACA
AAGAATAGCAGTACATCAAATTCTGTTTCTCCGAAAAGGGGAGTGGTTCGTGCACCGGAG
AAAAAGATTACTCTTTTTGCTCTAAGGCTAGCAGTGCTTGAAAAGGCAGCAACTGGACTA
GGCACACTTGGTTTCATATGGGCAACAGTTGTGCTTCTTGGTGGCTTTGCGATCACTTTA
GACACAACAGACTTTTGGGTCATAACAACTATTCTGTTGATTGAAGGAACAAGAATCTTT
AGCAGGAGTCATGAGCTTGAGTGGCAGCATCAAGCAACATGGTCTATTGCTGATGTGGGG
ATCAGCAGCTTTCGCGCGATTAAATCAAGTACAAGGAGCATTGTCAAGGCTGCAAAAGCA
GTTTTCAAGCCTTTTTCTGATGTTACAAAGGCAAGCAGTAGGGAAATTGGAAGGAATTCA
CAACAGACAGCTCGTGGGAAATGGGATAAGCGGAGGGTGCCAACACGAATGTGGACTAGT
TCAGAGGTTCCTCTGCTTCCATATGCACGATGGATGTTCATTGCAAGAAATGTTAGTAAG
ATGTTGTACTGGCTCCAAATATTATCTGCAACAGCATGTTTGGTGCTTTCGTTGATGAAG
CTTGTTTTGAGGAACTTTGGTGAAGTGGCCAAAGGAGATACCGATAAGAGGAACAGGAAA
AGTGCTCTACTTATATTCTATTCCCTCGCGTTCACGGAGGCATTGCTTTTTCTCTTGGAA
AAAGCATATTGGGAATGGAAGATCAACTTTTGTAGACTGTTGGAGGAGGTGAACAAAGAA
TGTGAATTGGGGCCATCAGGTATGACTTGTGTTAGGAGGTTCTTTTATGATGCTTATTCA
AGATGTGTTAATGGGAGCATATTTGATGGTCTTAAGATGGACATGGTTTCATTTGCTATG
GAACTCCTAGCCTCTAGCTCACCAGATGAACAGCTTATTGGTGCTCAAATCCTAAGAAAA
TTTGCTACGAGTCCACGATATTGTTATGACACCCTTCAGAAGATTGGAACAGACATAATA
GTAATGGAGAGGTTGGTTGAGATGTTGAATTGGAAAGACATCCAAGAAGAAGAGTTGAGG
CTATCAGCAGCAGAGATCATATCGAAGATTACTGGTAAAAAGCAAAATTCTCTTCGTGTT
GCGGGGATACCTGGTGCTATGGAGTCCATATCTTCACTTCTTCAAATCAGCAGGATGCCA
ACTGGAGCAAGTGATGAAATCTGTGAAAAGAGGATCATCTTTGACAATGAGAACTATGGA
TTTTGGACATTCAATCATTTGGGGCTGCTCATTCTGAAGAAACTTGCTCGCGACCACGAC
AACTGTGGGAAGATTGGCAATACTAGAGGTCTTCTGCCCAAAATCATAGAGTTCACACAA
GCAGGAGAGAGATTACTAAGAGAGGAATCAGCCACACCAACACAGATATTGACGCTAAAA
CGGTCTCTCCAGGTCGTGAAGATGCTTGTAAGCACAGCAGGCGCCACAGGTAAGGAGCTA
AGAAAAGAAATTTCAGAAATAGTCTTCACCATTAGCAATATCAGAGACATATTAAGATAT
GGAGAGGGACACCCTACTTTACAACAATTGGGAATAGAGATCTTGAAAAGTTTGGGATTG
GAGGAAGATGCAACAGAGAGAATTGGAGGCACCGGTGGAATCCTTAAGGAATTGTGCAAT
ATCTTCCTCAAGGAGGCCATGTCAAATCATCATGGTCATGTAAGAACTGCAGCAGGAGAA
GCCTTAGCTATGCTGGCACTTGAAAGCAAGAACAACTGCCATAGGATATTGAAACTGAAG
GTGACTGGCAAGCTTGTCCAAGCATTGGAAGTTCCATTGCTTCGAATAAATGCAGCAAGA
ATCCTGAGAAACTTGTGTGTCTACAGTGGAGAAGGCTACTTTGAAGAATTGAGGGAACTT
GCTTCTGCAGGACCAACTGTACTCAAAGCAATCATGACAGAGGAACACAAGTTACAAGAA
GTAATGATGGGACTAGGCGCGCATATATTCAAGTTTATAACACCAGAGGAATCAATCTTC
ATGTTCCAGAGCACGAAAATTCAAGAATCTGAATTGGCTGCAAAACTTGTTGAGATTCTT
AGGAAGCATCAACATCCATCTATAAAAGTTCCAAGAATTAGGAGGTTTGTCATAGAGTTG
TCAATCTGGATGATGAGGGATAAAAGAACAAACATTCAAGTGTTGGGAAATCTGGGAATG
GAGACGGAGCTCGAGTACATCATAGAAACAACATCAGAGCTAGAGAGCTTTAATGTTTTC
TCAGGAACAGTTGGAATGAATCGACACAGCGTGACAATCCACTCACTGGTGGATACTGCA
ATGAAGTTGTTGGCTGGTGAAAAAGAATGA