Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400011092
CDS Infomation

pacid=37461889 polypeptide=PGSC0003DMP400007717 locus=PGSC0003DMG400004340 ID=PGSC0003DMT400011092.v4.03 annot-version=v4.03
Sequence

ATGGGATGTGTTTTTGGAAAAATTGTTAGTGACGGGAGGACACAGAATTCTAACAATCGG
AATGCTTCCGACGGTGGTGTTGGAGCTCCAGGGGATGAGGTGAAGATCACTCAACCTCCA
CCGGCAGAAGGACCAAATCGCACAGAGTCGGTGTCTGAGTATTACAGTTTCAGAACATTG
GGAAACTCTTTTGCAACGAATCAGCAAGGGTGGCCGTCGTGGCTTGTTGCCGTTGCTGGA
GATGCTATAAAAGATTGGACTCCTCGCCGAGCGGATACCTTCCAGAAAATTGAAAAGATT
GGGCAAGGAACATATAGCAATGTATATAAAGCAAAGGACTTGATCACAGGGAAGATTGTT
GCATTGAAGAAAGTTAGGTTTGATACATTGGAGCCAGAGAGTGTGAAGTTCATGGCAAGA
GAAATACTTGTTTTGAAAAAACTGGACCATCCCAATGTCATCAAACTTGAAGGTTTGGTA
ACTTCGAGAATGTCGTCTAGTTTGTACCTTGTTTTCGAGTACATGGAGCATGATCTGGCT
GGTCTAGCTGCTGTTCAAAAGGTCAAATTTAGTGAATCACAGGTAAAGTGCTACATGAAA
CAGTTACTCTCTGGTCTAGAGCATTGTCACAATAATGGAGTCCTACACCGTGATGTAAAA
GGTTCCAATTTGCTGATTGATAATGAAGGAATTCTGAAAATAGCTGATTTTGGATTAGCT
TCATTTTATGATCCTGAACACAAGCAACCTATGACTAGTCGTGTTGTGACTCTCTGGTAC
CGTCCACCTGAACTTCTGCTTGGAGCTACTAATTACGGTGTTGGTGTTGACCTGTGGAGT
GCCGGGTGCATTTTGGCTGAGTTACTCGCAAGGAAGCCAATATTTCCTGGGAGAACGGAG
GTTGAGCAACTCCATAAAATATTTAGGTTGTGTGGCTCTCCATCCGAGGAGTATTGGAGG
AAATTCAAGTTACCAAATGCTACTCTGTTTAAACCACAACAACCTTATAAACGCTGCATT
GATGATACATTCAAGGAATTTCCACCCTCTTCACATCCTATGATTGCAACACTTCTTGCT
ATCGATCCTGATGAAAGAGGCACAGCAACTGCTGCTTTGAACAGCGAATTCCTTACAACT
GAACCATATCCTTGCGAGCCTTCAAGCTTGCCAAAATATCCTCCTAGCAAGGAAATGGAT
ATAAAACTAAGAGATGAAGCTGCCAGGAGGCAAAGTGGTTTGCACGGAAAAGCTCACACT
GGTGATGGTGTCAAGAAAGTGAGACGTGAGAAAGTTAGTCGTGCAATTCCAGCTCCGGAG
GCTAATGCAGAGCTCCAACCAAACCTCGATAGGTGGAGGATGATGACACAGGCTAATGCT
AAGAGCAAGAGTGAAAAATTTCCTCCACCACATCAAGATGGAGCTGTTGGATACCCTCTT
AATGCATCACATAATGGCCCTGCATCATTCAGTATAGCTGATGCTTCTTTTGATTCAAGT
TTTGATCCAAAGTCACGATCTTTGAGAAGCACCACAACTACAGGTGGGACGTCGAGGCAG
AGGAGAACCAAGAAAGAAGAGCCTCATATGGCTCTGTCTCGCAAATTTATCCATGCATTC
CTTCCTTCTTCTTTTAGACCATCTATAGATATGAGACTGAGGGGTAGAGTTTCCGTTTCA
GAGACATTTAGTCACCATAGATAA

Peptide Sequence

PEP ID

PGSC0003DMP400007717
PEP Infomation

pacid=37461889 transcript=PGSC0003DMT400011092 locus=PGSC0003DMG400004340 ID=PGSC0003DMT400011092.v4.03 annot-version=v4.03
Sequence

MGCVFGKIVSDGRTQNSNNRNASDGGVGAPGDEVKITQPPPAEGPNRTESVSEYYSFRTL
GNSFATNQQGWPSWLVAVAGDAIKDWTPRRADTFQKIEKIGQGTYSNVYKAKDLITGKIV
ALKKVRFDTLEPESVKFMAREILVLKKLDHPNVIKLEGLVTSRMSSSLYLVFEYMEHDLA
GLAAVQKVKFSESQVKCYMKQLLSGLEHCHNNGVLHRDVKGSNLLIDNEGILKIADFGLA
SFYDPEHKQPMTSRVVTLWYRPPELLLGATNYGVGVDLWSAGCILAELLARKPIFPGRTE
VEQLHKIFRLCGSPSEEYWRKFKLPNATLFKPQQPYKRCIDDTFKEFPPSSHPMIATLLA
IDPDERGTATAALNSEFLTTEPYPCEPSSLPKYPPSKEMDIKLRDEAARRQSGLHGKAHT
GDGVKKVRREKVSRAIPAPEANAELQPNLDRWRMMTQANAKSKSEKFPPPHQDGAVGYPL
NASHNGPASFSIADASFDSSFDPKSRSLRSTTTTGGTSRQRRTKKEEPHMALSRKFIHAF
LPSSFRPSIDMRLRGRVSVSETFSHHR*

Transcript Sequence

Transcript ID

PGSC0003DMT400011092
Transcript Infomation

pacid=37461889 locus=PGSC0003DMG400004340 ID=PGSC0003DMT400011092.v4.03 annot-version=v4.03
Sequence

ATGGGATGTGTTTTTGGAAAAATTGTTAGTGACGGGAGGACACAGAATTCTAACAATCGG
AATGCTTCCGACGGTGGTGTTGGAGCTCCAGGGGATGAGGTGAAGATCACTCAACCTCCA
CCGGCAGAAGGACCAAATCGCACAGAGTCGGTGTCTGAGTATTACAGTTTCAGAACATTG
GGAAACTCTTTTGCAACGAATCAGCAAGGGTGGCCGTCGTGGCTTGTTGCCGTTGCTGGA
GATGCTATAAAAGATTGGACTCCTCGCCGAGCGGATACCTTCCAGAAAATTGAAAAGATT
GGGCAAGGAACATATAGCAATGTATATAAAGCAAAGGACTTGATCACAGGGAAGATTGTT
GCATTGAAGAAAGTTAGGTTTGATACATTGGAGCCAGAGAGTGTGAAGTTCATGGCAAGA
GAAATACTTGTTTTGAAAAAACTGGACCATCCCAATGTCATCAAACTTGAAGGTTTGGTA
ACTTCGAGAATGTCGTCTAGTTTGTACCTTGTTTTCGAGTACATGGAGCATGATCTGGCT
GGTCTAGCTGCTGTTCAAAAGGTCAAATTTAGTGAATCACAGGTAAAGTGCTACATGAAA
CAGTTACTCTCTGGTCTAGAGCATTGTCACAATAATGGAGTCCTACACCGTGATGTAAAA
GGTTCCAATTTGCTGATTGATAATGAAGGAATTCTGAAAATAGCTGATTTTGGATTAGCT
TCATTTTATGATCCTGAACACAAGCAACCTATGACTAGTCGTGTTGTGACTCTCTGGTAC
CGTCCACCTGAACTTCTGCTTGGAGCTACTAATTACGGTGTTGGTGTTGACCTGTGGAGT
GCCGGGTGCATTTTGGCTGAGTTACTCGCAAGGAAGCCAATATTTCCTGGGAGAACGGAG
GTTGAGCAACTCCATAAAATATTTAGGTTGTGTGGCTCTCCATCCGAGGAGTATTGGAGG
AAATTCAAGTTACCAAATGCTACTCTGTTTAAACCACAACAACCTTATAAACGCTGCATT
GATGATACATTCAAGGAATTTCCACCCTCTTCACATCCTATGATTGCAACACTTCTTGCT
ATCGATCCTGATGAAAGAGGCACAGCAACTGCTGCTTTGAACAGCGAATTCCTTACAACT
GAACCATATCCTTGCGAGCCTTCAAGCTTGCCAAAATATCCTCCTAGCAAGGAAATGGAT
ATAAAACTAAGAGATGAAGCTGCCAGGAGGCAAAGTGGTTTGCACGGAAAAGCTCACACT
GGTGATGGTGTCAAGAAAGTGAGACGTGAGAAAGTTAGTCGTGCAATTCCAGCTCCGGAG
GCTAATGCAGAGCTCCAACCAAACCTCGATAGGTGGAGGATGATGACACAGGCTAATGCT
AAGAGCAAGAGTGAAAAATTTCCTCCACCACATCAAGATGGAGCTGTTGGATACCCTCTT
AATGCATCACATAATGGCCCTGCATCATTCAGTATAGCTGATGCTTCTTTTGATTCAAGT
TTTGATCCAAAGTCACGATCTTTGAGAAGCACCACAACTACAGGTGGGACGTCGAGGCAG
AGGAGAACCAAGAAAGAAGAGCCTCATATGGCTCTGTCTCGCAAATTTATCCATGCATTC
CTTCCTTCTTCTTTTAGACCATCTATAGATATGAGACTGAGGGGTAGAGTTTCCGTTTCA
GAGACATTTAGTCACCATAGATAA