Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400011022
CDS Infomation

pacid=37468840 polypeptide=PGSC0003DMP400007671 locus=PGSC0003DMG400004314 ID=PGSC0003DMT400011022.v4.03 annot-version=v4.03
Sequence

ATGGAAACTCACTCTGACGGCACAGATGAAATCGCCGCCGTGGAGGAGCTCCGGCAACAG
CACGAAACCCGTATACAAACCCTACACAACGCTCAATTGGAACTCATCGCCTCACTACAA
AACATAGTTCCTGATATAGTCTCTTCACTCGACCTCTCTCTTAAGACCATTTCATCCTTC
AATGGAAAACCCTTCACCCCTTTACCCAGCCCACTCCCTAACGCCCTCAACCATAACCCT
AATTTACTCGTCCCAAAGATCAATTCCAGTTCTGGTAAACGTGTTTCAGAACTTTCTAGA
AGTGGTAGTGAGAAGGAGAAAATGGTAATTGATGAATGTGGGGGACCTTTGTCGGTTGTA
AGGGCGATGGTTGCAGTTTGTTTGTTAGAGAGAGTGCCGTTTACTGCTATTGATTCGTCT
ACTTTGTTAAGGAAGTTAGAGAATGATCAGTCGCATACGGCTGCTGAAAAGGCAGCGATT
AGGGAGCTCGGAGGGGAGTCGGGGGCGATAGTGGCAGTGGAAATGGCATTGAAATCGATG
GCGGAGGATAATGGTTGTGTAGAATTGGAGAATTTTGTGGTTAGCGGGAAATCTAGGATT
ATGGTGTTGAATATTGATAGAACTAGGCTATTGAAAGAATTGCCGGAAAGTAGGCAGAAT
GAGGGAAGTGTTGGTGGAGGAAACCGGAATAATCAGGAAATAGTGAAAAGAGGGATTGAT
AATGGAGGAGCTTTTGGAATGGGAAGGGCAATGAGTGAAATGTGGGAGCATCCACATATG
CAGGGGATGACAGCTATGTTTCCTGGGAATATGGGCGGTCCAAGAGGAGGGCATAGAGGA
ATGGTGGGTATGATGGGGATGCCGAGAGGTGTTGGCGTTCCACCTCCTATGCATAGACCA
CCAATGGGGCCAAATGGGCCCATAGGAGGAGGAAATTCTATTGCTTTAAAACCTAGGTCA
GAAGAAGATGAGCTGAAGGATTTAGAGAAAATGTTGAATAAGAAAAGTTTTAAGGAAATG
CAGAAATCGAAAACTGGAGAGGAGTTATTGGACCTTATTCATCGTCCCACTGCGAAGGAA
TCTGCCGTCGCTGCAAAGTTCAAAAGCAAAGGTGGTTCCCAGGTGAAGGAATATTGTTCA
GCTTTAACAAAGGAAGATTGTCGACGCCAAGCTGGTTCCTACATTGCTTGTGATAAGGTT
CATTTTCGGCGAATAATTGCTGTGCATACTGATGTCAACTTGGGTGATTGCTCTTTTCTT
GATACTTGCCGTCACATGAAGACATGCAAGTATGTACATTATGAGCTTGACTCGACGCCA
GATGTATCACCCCTGATGATGGGAGCATCTACCTTGGCCCCTCCCAAGCCTTTGAAACCT
CAGCGTGCTCATTACTGTTCAGAAGTAGAGCTTGGTGAACCACAATGGATTAATTGTGAC
ATACGGTCATTTAGAATGGATATTTTAGGGCAGTTTGGAGTTATAATGGCTGATCCACCA
TGGGATATTCATATGGAATTGCCTTATGGGACAATGGCTGATGATGAAATGCGCACTTTA
AATGTCCCTGCACTGCAAACTGATGGTCTTATATTCCTTTGGGTCACCGGACGCGCAATG
GAGCTTGGACGGGAATGTCTAGAGCTTTGGGGTTACAAGCGTGTTGAGGAGATTATTTGG
GTTAAGACCAATCAACTTCAGCGAATCATCAGAACTGGACGGACAGGCCATTGGCTCAAT
CACAGCAAGGAACATTGCCTTGTTGGAATAAAGGGAAATCCAGAGGTGAACAGGAATATT
GATACTGATGTCATAGTAGCAGAGGTCCGGGAAACAAGTCGTAAGCCAGATGAGATGTAC
CCCTTGCTTGAAAGAATTAGTCCAAGGACAAGAAAGCTGGAGTTATTTGCGCGGATGCAC
AATGTTCATGGCGGGTGGATGTCACTTGGAAACCAACTACAAGGGGTACGATTAGTTGAT
GACGGGCTTAGGGCGCGGTTCAAGGCTGCATATCCAGATGTGGAGGTGCAACCTTCATCA
CCTCCAAGGCCATCATCTGCAATGGAAGTAGATTCAAGTTCTAATCAAATAAGGAATACA
TTTGCTGGAGGGGAATTAAAGGCTGCAGGGACCCAGGTCACTGAGGCTACACCCCCAGAT
GCAGCAGCCTATGCAACTGAAGGAAAACCAGTAAACCATGATGTGGAGATGACTAGCTAA

Peptide Sequence

PEP ID

PGSC0003DMP400007671
PEP Infomation

pacid=37468840 transcript=PGSC0003DMT400011022 locus=PGSC0003DMG400004314 ID=PGSC0003DMT400011022.v4.03 annot-version=v4.03
Sequence

METHSDGTDEIAAVEELRQQHETRIQTLHNAQLELIASLQNIVPDIVSSLDLSLKTISSF
NGKPFTPLPSPLPNALNHNPNLLVPKINSSSGKRVSELSRSGSEKEKMVIDECGGPLSVV
RAMVAVCLLERVPFTAIDSSTLLRKLENDQSHTAAEKAAIRELGGESGAIVAVEMALKSM
AEDNGCVELENFVVSGKSRIMVLNIDRTRLLKELPESRQNEGSVGGGNRNNQEIVKRGID
NGGAFGMGRAMSEMWEHPHMQGMTAMFPGNMGGPRGGHRGMVGMMGMPRGVGVPPPMHRP
PMGPNGPIGGGNSIALKPRSEEDELKDLEKMLNKKSFKEMQKSKTGEELLDLIHRPTAKE
SAVAAKFKSKGGSQVKEYCSALTKEDCRRQAGSYIACDKVHFRRIIAVHTDVNLGDCSFL
DTCRHMKTCKYVHYELDSTPDVSPLMMGASTLAPPKPLKPQRAHYCSEVELGEPQWINCD
IRSFRMDILGQFGVIMADPPWDIHMELPYGTMADDEMRTLNVPALQTDGLIFLWVTGRAM
ELGRECLELWGYKRVEEIIWVKTNQLQRIIRTGRTGHWLNHSKEHCLVGIKGNPEVNRNI
DTDVIVAEVRETSRKPDEMYPLLERISPRTRKLELFARMHNVHGGWMSLGNQLQGVRLVD
DGLRARFKAAYPDVEVQPSSPPRPSSAMEVDSSSNQIRNTFAGGELKAAGTQVTEATPPD
AAAYATEGKPVNHDVEMTS*

Transcript Sequence

Transcript ID

PGSC0003DMT400011022
Transcript Infomation

pacid=37468840 locus=PGSC0003DMG400004314 ID=PGSC0003DMT400011022.v4.03 annot-version=v4.03
Sequence

ATGGAAACTCACTCTGACGGCACAGATGAAATCGCCGCCGTGGAGGAGCTCCGGCAACAG
CACGAAACCCGTATACAAACCCTACACAACGCTCAATTGGAACTCATCGCCTCACTACAA
AACATAGTTCCTGATATAGTCTCTTCACTCGACCTCTCTCTTAAGACCATTTCATCCTTC
AATGGAAAACCCTTCACCCCTTTACCCAGCCCACTCCCTAACGCCCTCAACCATAACCCT
AATTTACTCGTCCCAAAGATCAATTCCAGTTCTGGTAAACGTGTTTCAGAACTTTCTAGA
AGTGGTAGTGAGAAGGAGAAAATGGTAATTGATGAATGTGGGGGACCTTTGTCGGTTGTA
AGGGCGATGGTTGCAGTTTGTTTGTTAGAGAGAGTGCCGTTTACTGCTATTGATTCGTCT
ACTTTGTTAAGGAAGTTAGAGAATGATCAGTCGCATACGGCTGCTGAAAAGGCAGCGATT
AGGGAGCTCGGAGGGGAGTCGGGGGCGATAGTGGCAGTGGAAATGGCATTGAAATCGATG
GCGGAGGATAATGGTTGTGTAGAATTGGAGAATTTTGTGGTTAGCGGGAAATCTAGGATT
ATGGTGTTGAATATTGATAGAACTAGGCTATTGAAAGAATTGCCGGAAAGTAGGCAGAAT
GAGGGAAGTGTTGGTGGAGGAAACCGGAATAATCAGGAAATAGTGAAAAGAGGGATTGAT
AATGGAGGAGCTTTTGGAATGGGAAGGGCAATGAGTGAAATGTGGGAGCATCCACATATG
CAGGGGATGACAGCTATGTTTCCTGGGAATATGGGCGGTCCAAGAGGAGGGCATAGAGGA
ATGGTGGGTATGATGGGGATGCCGAGAGGTGTTGGCGTTCCACCTCCTATGCATAGACCA
CCAATGGGGCCAAATGGGCCCATAGGAGGAGGAAATTCTATTGCTTTAAAACCTAGGTCA
GAAGAAGATGAGCTGAAGGATTTAGAGAAAATGTTGAATAAGAAAAGTTTTAAGGAAATG
CAGAAATCGAAAACTGGAGAGGAGTTATTGGACCTTATTCATCGTCCCACTGCGAAGGAA
TCTGCCGTCGCTGCAAAGTTCAAAAGCAAAGGTGGTTCCCAGGTGAAGGAATATTGTTCA
GCTTTAACAAAGGAAGATTGTCGACGCCAAGCTGGTTCCTACATTGCTTGTGATAAGGTT
CATTTTCGGCGAATAATTGCTGTGCATACTGATGTCAACTTGGGTGATTGCTCTTTTCTT
GATACTTGCCGTCACATGAAGACATGCAAGTATGTACATTATGAGCTTGACTCGACGCCA
GATGTATCACCCCTGATGATGGGAGCATCTACCTTGGCCCCTCCCAAGCCTTTGAAACCT
CAGCGTGCTCATTACTGTTCAGAAGTAGAGCTTGGTGAACCACAATGGATTAATTGTGAC
ATACGGTCATTTAGAATGGATATTTTAGGGCAGTTTGGAGTTATAATGGCTGATCCACCA
TGGGATATTCATATGGAATTGCCTTATGGGACAATGGCTGATGATGAAATGCGCACTTTA
AATGTCCCTGCACTGCAAACTGATGGTCTTATATTCCTTTGGGTCACCGGACGCGCAATG
GAGCTTGGACGGGAATGTCTAGAGCTTTGGGGTTACAAGCGTGTTGAGGAGATTATTTGG
GTTAAGACCAATCAACTTCAGCGAATCATCAGAACTGGACGGACAGGCCATTGGCTCAAT
CACAGCAAGGAACATTGCCTTGTTGGAATAAAGGGAAATCCAGAGGTGAACAGGAATATT
GATACTGATGTCATAGTAGCAGAGGTCCGGGAAACAAGTCGTAAGCCAGATGAGATGTAC
CCCTTGCTTGAAAGAATTAGTCCAAGGACAAGAAAGCTGGAGTTATTTGCGCGGATGCAC
AATGTTCATGGCGGGTGGATGTCACTTGGAAACCAACTACAAGGGGTACGATTAGTTGAT
GACGGGCTTAGGGCGCGGTTCAAGGCTGCATATCCAGATGTGGAGGTGCAACCTTCATCA
CCTCCAAGGCCATCATCTGCAATGGAAGTAGATTCAAGTTCTAATCAAATAAGGAATACA
TTTGCTGGAGGGGAATTAAAGGCTGCAGGGACCCAGGTCACTGAGGCTACACCCCCAGAT
GCAGCAGCCTATGCAACTGAAGGAAAACCAGTAAACCATGATGTGGAGATGACTAGCTAA