Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400010905
CDS Infomation

pacid=37447261 polypeptide=PGSC0003DMP400007594 locus=PGSC0003DMG400004271 ID=PGSC0003DMT400010905.v4.03 annot-version=v4.03
Sequence

ATGGAGGAAGCCAATAATGTAAAAATTGTGGCTTTGCTTATAATTTGCCTCTCCGTTGGA
GCTTTGTTGGTAAAAGCTGAGGATCCTTACCTCTTTTTCGAGTGGAATGTCACTTATGGC
ACAATTGCTCCGTTGGGTGTCCCCCAACAAGGTATCCTAATCAATGGGCAACTTCCGGGG
CCCAGGATCAATTGCACATCCAACAATAATATTGTTGTCAATGTCTACAATAAGCTAGAT
GAGCCCTTACTCCTTACTTGGAATGGTATCCAACAAAGGAAGAATTCATGGCAAGATGGT
ACCCCAGGAACCATGTGTCCTATCATGCCTGGTACAAATTTCACTTATCATTTTCAAGTG
AAGGACCAAATTGGTAGCTTCTTCTACTTTCCTACTACAAGCTTGCATCGTGCATCCGGT
GGCTTCGGTGCCCTCGATGTTCATAGTCGTAACCTTATTCCCATTCCTTTTGACAAACCC
GCTGATGAGTACAATGTCTTTTTGGGCGATTGGTACAATAAGGGACACAAAGCCCTGAAA
AAGACGTTAGATGGAGGACGCACCATTGGGAGACCTGATGGTATTCACATTAATGGAAAG
TCCAATAAACTTGGTGACAAAGCAGAGCCATTATTCAGCATGGAAGCTGGCAAGATCTAT
AGGTACAGGATGTGCAACGTCGGTATGAGGACCTCAGTTAATGTCAGGATCCAAGGTCAT
GCGATGAAGCTAGTGGAGATGGAAGGATCACATACCGTGCAAAATATGTACGACTCTCTT
GACATCCACGTTGGTCAATGTCTTTCGGTCTTGGTCACTGCTGATCAGGAGCCTAAGGAC
TATTACATGGTTGTTTCTAGCCGATTTTTGAAGCAAGCCATCTCCTCCGTAGCCATCCTA
CGTTATGCAAATGGCAAGGGAGTCGGATCAACATCAATATCTGATCATCTCCCAACACCT
CCACCAAATAACACTCAAGGTATTGCTTGGTCCATGAATCAATTTCGATCCTTCAGATGG
AATCTCACAGCTAGTGCTGCCCGTCCTAATCCTCAGGGATCCTATCACTACGGACAGATC
AACATTACTCGCACCATCAAGATTGTCAACTCGAGAAGCCAAGTAAATGGCAAGCTTCGA
TTTGCCTTGAATGGTATCTCTCATATGGATAGTGACACCCCATTGAAGCTTGTTGAGTAC
TTTGGAGTAGCTGAAAAGACTTTCAAGTATGATGTGATGGGGGATGAGCCTCCGACTCCT
AGCAGCAACAACAACAAAGTGGTGACCATTGCTCCAAATGTGAAAAATGCTACCTTTCGT
AATTTCGTGGAGATTATCTTTGAGAACGAAGAAAAGACTATCCAGACGTATCACTTGGAT
GGATATTCATTTTTTGCAGTAGGGATCGAGCCTGGGAAATGGAAACCTGAGAAAAGAAAG
AACTACAACTTAGTAGATGCAGTAAGCAGACACAGTATCCAAGTGTATCCAAATTCGTGG
GCAGCCATAATGACAACTTTAGACAATGCAGGAATATGGAACTTACGATCCGATATGTGG
GAGAGAAACTACTTAGGACAACAATTATATTTTAGTGTACTCTCTCCTTCACGCTCCTTG
AGGGATGAGTATAACCTCCCAGACAACCATCCTCTTTGTGGTATTGTCAAGAGTATGCCC
ATGCCGCCACCATACAAACCATAG

Peptide Sequence

PEP ID

PGSC0003DMP400007594
PEP Infomation

pacid=37447261 transcript=PGSC0003DMT400010905 locus=PGSC0003DMG400004271 ID=PGSC0003DMT400010905.v4.03 annot-version=v4.03
Sequence

MEEANNVKIVALLIICLSVGALLVKAEDPYLFFEWNVTYGTIAPLGVPQQGILINGQLPG
PRINCTSNNNIVVNVYNKLDEPLLLTWNGIQQRKNSWQDGTPGTMCPIMPGTNFTYHFQV
KDQIGSFFYFPTTSLHRASGGFGALDVHSRNLIPIPFDKPADEYNVFLGDWYNKGHKALK
KTLDGGRTIGRPDGIHINGKSNKLGDKAEPLFSMEAGKIYRYRMCNVGMRTSVNVRIQGH
AMKLVEMEGSHTVQNMYDSLDIHVGQCLSVLVTADQEPKDYYMVVSSRFLKQAISSVAIL
RYANGKGVGSTSISDHLPTPPPNNTQGIAWSMNQFRSFRWNLTASAARPNPQGSYHYGQI
NITRTIKIVNSRSQVNGKLRFALNGISHMDSDTPLKLVEYFGVAEKTFKYDVMGDEPPTP
SSNNNKVVTIAPNVKNATFRNFVEIIFENEEKTIQTYHLDGYSFFAVGIEPGKWKPEKRK
NYNLVDAVSRHSIQVYPNSWAAIMTTLDNAGIWNLRSDMWERNYLGQQLYFSVLSPSRSL
RDEYNLPDNHPLCGIVKSMPMPPPYKP*

Transcript Sequence

Transcript ID

PGSC0003DMT400010905
Transcript Infomation

pacid=37447261 locus=PGSC0003DMG400004271 ID=PGSC0003DMT400010905.v4.03 annot-version=v4.03
Sequence

ATGGAGGAAGCCAATAATGTAAAAATTGTGGCTTTGCTTATAATTTGCCTCTCCGTTGGA
GCTTTGTTGGTAAAAGCTGAGGATCCTTACCTCTTTTTCGAGTGGAATGTCACTTATGGC
ACAATTGCTCCGTTGGGTGTCCCCCAACAAGGTATCCTAATCAATGGGCAACTTCCGGGG
CCCAGGATCAATTGCACATCCAACAATAATATTGTTGTCAATGTCTACAATAAGCTAGAT
GAGCCCTTACTCCTTACTTGGAATGGTATCCAACAAAGGAAGAATTCATGGCAAGATGGT
ACCCCAGGAACCATGTGTCCTATCATGCCTGGTACAAATTTCACTTATCATTTTCAAGTG
AAGGACCAAATTGGTAGCTTCTTCTACTTTCCTACTACAAGCTTGCATCGTGCATCCGGT
GGCTTCGGTGCCCTCGATGTTCATAGTCGTAACCTTATTCCCATTCCTTTTGACAAACCC
GCTGATGAGTACAATGTCTTTTTGGGCGATTGGTACAATAAGGGACACAAAGCCCTGAAA
AAGACGTTAGATGGAGGACGCACCATTGGGAGACCTGATGGTATTCACATTAATGGAAAG
TCCAATAAACTTGGTGACAAAGCAGAGCCATTATTCAGCATGGAAGCTGGCAAGATCTAT
AGGTACAGGATGTGCAACGTCGGTATGAGGACCTCAGTTAATGTCAGGATCCAAGGTCAT
GCGATGAAGCTAGTGGAGATGGAAGGATCACATACCGTGCAAAATATGTACGACTCTCTT
GACATCCACGTTGGTCAATGTCTTTCGGTCTTGGTCACTGCTGATCAGGAGCCTAAGGAC
TATTACATGGTTGTTTCTAGCCGATTTTTGAAGCAAGCCATCTCCTCCGTAGCCATCCTA
CGTTATGCAAATGGCAAGGGAGTCGGATCAACATCAATATCTGATCATCTCCCAACACCT
CCACCAAATAACACTCAAGGTATTGCTTGGTCCATGAATCAATTTCGATCCTTCAGATGG
AATCTCACAGCTAGTGCTGCCCGTCCTAATCCTCAGGGATCCTATCACTACGGACAGATC
AACATTACTCGCACCATCAAGATTGTCAACTCGAGAAGCCAAGTAAATGGCAAGCTTCGA
TTTGCCTTGAATGGTATCTCTCATATGGATAGTGACACCCCATTGAAGCTTGTTGAGTAC
TTTGGAGTAGCTGAAAAGACTTTCAAGTATGATGTGATGGGGGATGAGCCTCCGACTCCT
AGCAGCAACAACAACAAAGTGGTGACCATTGCTCCAAATGTGAAAAATGCTACCTTTCGT
AATTTCGTGGAGATTATCTTTGAGAACGAAGAAAAGACTATCCAGACGTATCACTTGGAT
GGATATTCATTTTTTGCAGTAGGGATCGAGCCTGGGAAATGGAAACCTGAGAAAAGAAAG
AACTACAACTTAGTAGATGCAGTAAGCAGACACAGTATCCAAGTGTATCCAAATTCGTGG
GCAGCCATAATGACAACTTTAGACAATGCAGGAATATGGAACTTACGATCCGATATGTGG
GAGAGAAACTACTTAGGACAACAATTATATTTTAGTGTACTCTCTCCTTCACGCTCCTTG
AGGGATGAGTATAACCTCCCAGACAACCATCCTCTTTGTGGTATTGTCAAGAGTATGCCC
ATGCCGCCACCATACAAACCATAG