Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400010866
CDS Infomation

pacid=37447912 polypeptide=PGSC0003DMP400007565 locus=PGSC0003DMG400004253 ID=PGSC0003DMT400010866.v4.03 annot-version=v4.03
Sequence

ATGGCAGCTCAACAGAAGAATGTCGGAATCCTCGCCATGGAAATTTACTTTCCTCCTACT
TGCATTCAACAGGAAACGATGGAAGCTCATGATGGAGCAAGCAAAGGGAAATACACAATT
GGTCTTGGACAAGATTGCATGGGATTTTGTACTGAGGTGGAAGATGTTATATCAATGAGT
TTGACAGCTGTTTCTTCCCTTCTCGAAAAGTATGCGATTGATCCAAAGAAAGTTGGTAGA
CTGGAAGTTGGAAGTGAGACTGTTATTGATAAAAGCAAATCCATCAAGACGTTCCTGATG
CAAATATTTGAGAAATGCGGGAATACTGACATTGAAGGAGTTGACTCAACTAATGCATGC
TATGGTGGAACTGCTGCATTGTTCAACTGCGTGAATTGGGTGGAGAGCGCGTCATGGGAT
GGACGCTATGGACTTGTTGTATGCACAGATAGTGCGGTCTATGCTGAGGGACCTGCTAGG
CCAACGGGAGGCGCAGCTGCCATTGCTATGCTAATTGGCCCTGATGCCCCTATTGTGTTT
GAAAGCAAGATCAGGGCTAGTCATATGGCTCATGTCTATGATTTTTACAAGCCCATCCTA
GACAGCGAATATCCAGTCGTTGATGGCAAGCTTTCACAAACTTGTTATCTTGTGGCACTT
GATTCTTGCTACAAGATCTTATGCAACAAATACGAGAAATTGGAAGGCAATCAGTTTTCG
ATAGCTGATGCAGCTTACTTTGTGTTCCATTCACCGTACAACAAGCTTGTACAGAAGAGC
TTTGCTCGGTTGGTATTCAATGACTTTACGAGGAATGCTAGCTCCATCGATGAATCTGCT
AAAGAAAAGCTGTCCCCATTTTCGTCTCTAAGTCATGATGAAAGCTACCAAAGCCGTGAT
CTTGAGAAGGTATCCCAGCAAGTTGCAAAACCGTTTTACGATGAGAAGGTGCAACCTACC
ACATTAATACCAAAACAAGTTGGCAATATGTATACTGCCTCTCTATATGCTGCTTTTGCA
TCACTCCTTCACAATAAACACAACACACTGGCTGGACAACGGGTAGTTCTGTTCTCCTAC
GGTAGTGGATCAACCGCAACAATGTTCTCCCTCAAGCTTAATGAAGGCCAACATCCTTTT
AGCTTGTCAAACATTGCAAGTGTGATGAATGTTAAAGAGAAATTGAAATCAAGAAACGAG
TTGACTCCTGAAAAATTCGTCGAAATTATGAAACTAATGGAGCATAGGTACGGTGCCAAG
GACTTCGTTACGAGCAAGGATTGTAGCCTTCTAGCTCCAGGAACCTACTACCTTACAGAG
GTTGATTCCAAGTATAGAAGATTTTATGCCAAGAAAGGTGCTGAGAATGGACTGGCCAAT
GGTCATTGA

Peptide Sequence

PEP ID

PGSC0003DMP400007565
PEP Infomation

pacid=37447912 transcript=PGSC0003DMT400010866 locus=PGSC0003DMG400004253 ID=PGSC0003DMT400010866.v4.03 annot-version=v4.03
Sequence

MAAQQKNVGILAMEIYFPPTCIQQETMEAHDGASKGKYTIGLGQDCMGFCTEVEDVISMS
LTAVSSLLEKYAIDPKKVGRLEVGSETVIDKSKSIKTFLMQIFEKCGNTDIEGVDSTNAC
YGGTAALFNCVNWVESASWDGRYGLVVCTDSAVYAEGPARPTGGAAAIAMLIGPDAPIVF
ESKIRASHMAHVYDFYKPILDSEYPVVDGKLSQTCYLVALDSCYKILCNKYEKLEGNQFS
IADAAYFVFHSPYNKLVQKSFARLVFNDFTRNASSIDESAKEKLSPFSSLSHDESYQSRD
LEKVSQQVAKPFYDEKVQPTTLIPKQVGNMYTASLYAAFASLLHNKHNTLAGQRVVLFSY
GSGSTATMFSLKLNEGQHPFSLSNIASVMNVKEKLKSRNELTPEKFVEIMKLMEHRYGAK
DFVTSKDCSLLAPGTYYLTEVDSKYRRFYAKKGAENGLANGH*

Transcript Sequence

Transcript ID

PGSC0003DMT400010866
Transcript Infomation

pacid=37447912 locus=PGSC0003DMG400004253 ID=PGSC0003DMT400010866.v4.03 annot-version=v4.03
Sequence

ATGGCAGCTCAACAGAAGAATGTCGGAATCCTCGCCATGGAAATTTACTTTCCTCCTACT
TGCATTCAACAGGAAACGATGGAAGCTCATGATGGAGCAAGCAAAGGGAAATACACAATT
GGTCTTGGACAAGATTGCATGGGATTTTGTACTGAGGTGGAAGATGTTATATCAATGAGT
TTGACAGCTGTTTCTTCCCTTCTCGAAAAGTATGCGATTGATCCAAAGAAAGTTGGTAGA
CTGGAAGTTGGAAGTGAGACTGTTATTGATAAAAGCAAATCCATCAAGACGTTCCTGATG
CAAATATTTGAGAAATGCGGGAATACTGACATTGAAGGAGTTGACTCAACTAATGCATGC
TATGGTGGAACTGCTGCATTGTTCAACTGCGTGAATTGGGTGGAGAGCGCGTCATGGGAT
GGACGCTATGGACTTGTTGTATGCACAGATAGTGCGGTCTATGCTGAGGGACCTGCTAGG
CCAACGGGAGGCGCAGCTGCCATTGCTATGCTAATTGGCCCTGATGCCCCTATTGTGTTT
GAAAGCAAGATCAGGGCTAGTCATATGGCTCATGTCTATGATTTTTACAAGCCCATCCTA
GACAGCGAATATCCAGTCGTTGATGGCAAGCTTTCACAAACTTGTTATCTTGTGGCACTT
GATTCTTGCTACAAGATCTTATGCAACAAATACGAGAAATTGGAAGGCAATCAGTTTTCG
ATAGCTGATGCAGCTTACTTTGTGTTCCATTCACCGTACAACAAGCTTGTACAGAAGAGC
TTTGCTCGGTTGGTATTCAATGACTTTACGAGGAATGCTAGCTCCATCGATGAATCTGCT
AAAGAAAAGCTGTCCCCATTTTCGTCTCTAAGTCATGATGAAAGCTACCAAAGCCGTGAT
CTTGAGAAGGTATCCCAGCAAGTTGCAAAACCGTTTTACGATGAGAAGGTGCAACCTACC
ACATTAATACCAAAACAAGTTGGCAATATGTATACTGCCTCTCTATATGCTGCTTTTGCA
TCACTCCTTCACAATAAACACAACACACTGGCTGGACAACGGGTAGTTCTGTTCTCCTAC
GGTAGTGGATCAACCGCAACAATGTTCTCCCTCAAGCTTAATGAAGGCCAACATCCTTTT
AGCTTGTCAAACATTGCAAGTGTGATGAATGTTAAAGAGAAATTGAAATCAAGAAACGAG
TTGACTCCTGAAAAATTCGTCGAAATTATGAAACTAATGGAGCATAGGTACGGTGCCAAG
GACTTCGTTACGAGCAAGGATTGTAGCCTTCTAGCTCCAGGAACCTACTACCTTACAGAG
GTTGATTCCAAGTATAGAAGATTTTATGCCAAGAAAGGTGCTGAGAATGGACTGGCCAAT
GGTCATTGA