Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400010820
CDS Infomation

pacid=37447359 polypeptide=PGSC0003DMP400007529 locus=PGSC0003DMG400004231 ID=PGSC0003DMT400010820.v4.03 annot-version=v4.03
Sequence

ATGGAGCTTAAAGTTTCATCTTCAAAGCCAGCCTTTCCATCTTCTGATAGCAACAATGAT
CCTGAAGAGAAAGAAATCAGTGAAGAGGATGATGATGATCGCAATCACAAGCATCGTAGG
AGAGAATTGCATTCTCAATCTGAAGAGACAGAGGATGTTGAACCAGTTTTCAGTAGACCA
TTCAGGAAACGAAACAAGCCTTTTGAAAATGGACATCCTTATGGGGAAGGGAACTCTCAG
TTAAGTGAAACCAAGTTCCCAAGAAGACGAGGTATGGGCTCATTTTCGAGAGCCCCTCCG
GATTCATACCAAAGAATGAGGGTGAATCAATCACTGTTCGGTGATGCTGGTAACGGTAGG
GGTCGAGGAAGAGACCTTAATGCTTGGGGCCAACGTGATTCCAGGTTCAGCTCAGTGGAT
ATTGCATCTCAACTGTTTCCACAGGGCTCTGTTACTCCCGGTCAATTTACTGGAAGAGGG
GTGGAAAACGTTGCTAATGCACAGAGTTCATCTTGGAGTGCATTTGGAATGGTTCCAGGA
ATTTCTAATGGCGGTCTTGATACACTTCATTCTGTTGGTTTCCAGGGAACACTCAGGCCA
TCCTTGAATCATACCATGAATATGGGTATTCCAAGGCAGAGATGTAGAGACTTTGAGGAG
CGTGGATTTTGCCTAAGAGGAGATATGTGCCCGATGGAGCACGGAGTAAATCGTATTGTT
GTTGAAGATGTTCAGAGCCTTTCTCAGTTTAATCTTCCTGTGTCACTTCCTAACGCGCAC
ATGCTTGGACCAGTTACTGGACAAGGATCTTTACCTGTGATAGGCCCTTCTGGCTCATTG
GCTAGTGGCAAAGCTTTACATAACAAAAGCAAATTTCCAGTGATTGATGATGCATTGGGC
TTGACTGATGCTTTTGTTGATGGTTCTATGGCCGGGGGAGCTGATTTCTATGATCCTGAT
CAGCCTTTATGGTCAAATGATCGTTCTGAAACTTCAGCAGCACTCCAGAATTTAAATCCA
TCCAACTTCGATGATACTGGTCGTTTGTTAGTTGAAGACTCCTCTGACAATGATCAAGTT
GGGCTGTGTAATGCCTTTGATCTTGAGCATCCACTAAGAGGTGCTAAGGCAGCTACAGGA
TCTCAGAGTGTGTGGGGAAGAAACCGAAGGTCTAAAAATAAGTTGAATGTAAAAGAGAGA
ACTGCTTGTACAGGAAATGCTTCAAGCTTTGATGAAACGGGAAAAGATTTACTCCGCAGC
AGTCAGGGCATATTTCTTCCAGGGAAGCTAATGAATGAAGAAACTATTGACCCACAAATG
AAGGATTTTTCTTCCTTGCCCCAAAGTAGTTCTGGACATAATATAAGAAAACCTTCTCAG
AAGGCACTTCGCACTCTGTTTGTGAGAGGCATACCACAGAGAGACAACAAACTAGATGCT
CTTCTTTCACATTTCAAAAAATTTGGGGAGGTCATTGACATCCACATCCCACTGAGTGGT
GATCGAGCTTTTGTTCAATTTTCCAAGAGAGAAGAAGCTGAGGCTGCTTTAAAGGCACCT
GATGCTGTGATGGGAAACAGATTTATAAAGCTTTTATGGGCAAACAGGGATAGAATTATG
GATGATGGAGTAAATGGTGTTAGTAATTCACCTTTAACTCCTCGTGGAGTGACATCCAGT
TTAGTACCACCCCACCTATCTGTTCCTTATAAAGGAAAAGACAATATCCAGTCCTCAGCC
CTAAAAGCTGCTGAACATGGTCCTGTTGCTCCATCACCTACTTCTGCTTTACCTAAGCCT
GTGGCTCATAATGGTCCCAAAGCTGCACCAGCTCTGCAAACAAAGGTGGCGAGCTTAGAA
CTTTTGAAGGAAGAATTGCGCAAGAAGCAGGAGCTGCTTGATCAGAAGCGCAATGAGTTC
CGACGTCAGTTGAATAAACTTGAGAAGCAAGCTGTAGGTGTGAAAGCTGAAGCAGTCTCT
GACCAGGATCTGGAGAAACAGAAGGAAGGGGAAACAGTATCAGATTCTACAAAAGTGAGG
TCAAGCTCCATGCGACTTAATGATGTATCCTCGACACAAGCTGAAGCAGTATCCGATAAT
AGCAGATCAACAGAAAATGCAGAGCACTCTTGTCCTATATCATGTTCTGCTGCAGCTACA
CAGGAACCTTCAAGCTTGAGACAGTCAATTCCTCCAGTGGCACCACATGGTGCAGCTTTT
ATTTTCAATAGATACAAACTAGACAATCGTCCCACTGCCTTCAAAGTCCTTCCACCTATG
CCAAGTGGTCTTGCAAATGTTACTGTCTTGAAGGAACATTTCTCCACTTTTGGTGACCCT
CCCGCCGTTGAGATGGAAGATTTGGAGCCTCAAGATGGTAATAATGGCTCGGAAATGTCA
AACATATCTGCTAGTATATGTTTCCCAACGCGCCGTTCTGCTGAAAGAGCATTTTCGAAT
GGCAAAATCTGGCAAGGCCAAGCTTTGCAGTTTATGTGGTTGCAGTCTAGTAATTCTACC
AAGGATATTGGTGTCAAAAAAGATGCTCATCCTGCTTTGAAGCAACCTCCAGATGCTAGT
GTGCAAACCATCCCACAAGACACACAGGAAGAAAATGCTGCAGGGATTGATGAACCTGAA
AAATATGACATAGAATGCGAGAAGCAGCCTTCAGATGCCAATGTTCAAACCAGCCCAAAA
GATCCTTTGACTGGTTCACGGGAAAGAACTGCTGCAGATATGGATGAACTTGAAAAAGCT
TATATAGGTAGCTGA

Peptide Sequence

PEP ID

PGSC0003DMP400007529
PEP Infomation

pacid=37447359 transcript=PGSC0003DMT400010820 locus=PGSC0003DMG400004231 ID=PGSC0003DMT400010820.v4.03 annot-version=v4.03
Sequence

MELKVSSSKPAFPSSDSNNDPEEKEISEEDDDDRNHKHRRRELHSQSEETEDVEPVFSRP
FRKRNKPFENGHPYGEGNSQLSETKFPRRRGMGSFSRAPPDSYQRMRVNQSLFGDAGNGR
GRGRDLNAWGQRDSRFSSVDIASQLFPQGSVTPGQFTGRGVENVANAQSSSWSAFGMVPG
ISNGGLDTLHSVGFQGTLRPSLNHTMNMGIPRQRCRDFEERGFCLRGDMCPMEHGVNRIV
VEDVQSLSQFNLPVSLPNAHMLGPVTGQGSLPVIGPSGSLASGKALHNKSKFPVIDDALG
LTDAFVDGSMAGGADFYDPDQPLWSNDRSETSAALQNLNPSNFDDTGRLLVEDSSDNDQV
GLCNAFDLEHPLRGAKAATGSQSVWGRNRRSKNKLNVKERTACTGNASSFDETGKDLLRS
SQGIFLPGKLMNEETIDPQMKDFSSLPQSSSGHNIRKPSQKALRTLFVRGIPQRDNKLDA
LLSHFKKFGEVIDIHIPLSGDRAFVQFSKREEAEAALKAPDAVMGNRFIKLLWANRDRIM
DDGVNGVSNSPLTPRGVTSSLVPPHLSVPYKGKDNIQSSALKAAEHGPVAPSPTSALPKP
VAHNGPKAAPALQTKVASLELLKEELRKKQELLDQKRNEFRRQLNKLEKQAVGVKAEAVS
DQDLEKQKEGETVSDSTKVRSSSMRLNDVSSTQAEAVSDNSRSTENAEHSCPISCSAAAT
QEPSSLRQSIPPVAPHGAAFIFNRYKLDNRPTAFKVLPPMPSGLANVTVLKEHFSTFGDP
PAVEMEDLEPQDGNNGSEMSNISASICFPTRRSAERAFSNGKIWQGQALQFMWLQSSNST
KDIGVKKDAHPALKQPPDASVQTIPQDTQEENAAGIDEPEKYDIECEKQPSDANVQTSPK
DPLTGSRERTAADMDELEKAYIGS*

Transcript Sequence

Transcript ID

PGSC0003DMT400010820
Transcript Infomation

pacid=37447359 locus=PGSC0003DMG400004231 ID=PGSC0003DMT400010820.v4.03 annot-version=v4.03
Sequence

ATGGAGCTTAAAGTTTCATCTTCAAAGCCAGCCTTTCCATCTTCTGATAGCAACAATGAT
CCTGAAGAGAAAGAAATCAGTGAAGAGGATGATGATGATCGCAATCACAAGCATCGTAGG
AGAGAATTGCATTCTCAATCTGAAGAGACAGAGGATGTTGAACCAGTTTTCAGTAGACCA
TTCAGGAAACGAAACAAGCCTTTTGAAAATGGACATCCTTATGGGGAAGGGAACTCTCAG
TTAAGTGAAACCAAGTTCCCAAGAAGACGAGGTATGGGCTCATTTTCGAGAGCCCCTCCG
GATTCATACCAAAGAATGAGGGTGAATCAATCACTGTTCGGTGATGCTGGTAACGGTAGG
GGTCGAGGAAGAGACCTTAATGCTTGGGGCCAACGTGATTCCAGGTTCAGCTCAGTGGAT
ATTGCATCTCAACTGTTTCCACAGGGCTCTGTTACTCCCGGTCAATTTACTGGAAGAGGG
GTGGAAAACGTTGCTAATGCACAGAGTTCATCTTGGAGTGCATTTGGAATGGTTCCAGGA
ATTTCTAATGGCGGTCTTGATACACTTCATTCTGTTGGTTTCCAGGGAACACTCAGGCCA
TCCTTGAATCATACCATGAATATGGGTATTCCAAGGCAGAGATGTAGAGACTTTGAGGAG
CGTGGATTTTGCCTAAGAGGAGATATGTGCCCGATGGAGCACGGAGTAAATCGTATTGTT
GTTGAAGATGTTCAGAGCCTTTCTCAGTTTAATCTTCCTGTGTCACTTCCTAACGCGCAC
ATGCTTGGACCAGTTACTGGACAAGGATCTTTACCTGTGATAGGCCCTTCTGGCTCATTG
GCTAGTGGCAAAGCTTTACATAACAAAAGCAAATTTCCAGTGATTGATGATGCATTGGGC
TTGACTGATGCTTTTGTTGATGGTTCTATGGCCGGGGGAGCTGATTTCTATGATCCTGAT
CAGCCTTTATGGTCAAATGATCGTTCTGAAACTTCAGCAGCACTCCAGAATTTAAATCCA
TCCAACTTCGATGATACTGGTCGTTTGTTAGTTGAAGACTCCTCTGACAATGATCAAGTT
GGGCTGTGTAATGCCTTTGATCTTGAGCATCCACTAAGAGGTGCTAAGGCAGCTACAGGA
TCTCAGAGTGTGTGGGGAAGAAACCGAAGGTCTAAAAATAAGTTGAATGTAAAAGAGAGA
ACTGCTTGTACAGGAAATGCTTCAAGCTTTGATGAAACGGGAAAAGATTTACTCCGCAGC
AGTCAGGGCATATTTCTTCCAGGGAAGCTAATGAATGAAGAAACTATTGACCCACAAATG
AAGGATTTTTCTTCCTTGCCCCAAAGTAGTTCTGGACATAATATAAGAAAACCTTCTCAG
AAGGCACTTCGCACTCTGTTTGTGAGAGGCATACCACAGAGAGACAACAAACTAGATGCT
CTTCTTTCACATTTCAAAAAATTTGGGGAGGTCATTGACATCCACATCCCACTGAGTGGT
GATCGAGCTTTTGTTCAATTTTCCAAGAGAGAAGAAGCTGAGGCTGCTTTAAAGGCACCT
GATGCTGTGATGGGAAACAGATTTATAAAGCTTTTATGGGCAAACAGGGATAGAATTATG
GATGATGGAGTAAATGGTGTTAGTAATTCACCTTTAACTCCTCGTGGAGTGACATCCAGT
TTAGTACCACCCCACCTATCTGTTCCTTATAAAGGAAAAGACAATATCCAGTCCTCAGCC
CTAAAAGCTGCTGAACATGGTCCTGTTGCTCCATCACCTACTTCTGCTTTACCTAAGCCT
GTGGCTCATAATGGTCCCAAAGCTGCACCAGCTCTGCAAACAAAGGTGGCGAGCTTAGAA
CTTTTGAAGGAAGAATTGCGCAAGAAGCAGGAGCTGCTTGATCAGAAGCGCAATGAGTTC
CGACGTCAGTTGAATAAACTTGAGAAGCAAGCTGTAGGTGTGAAAGCTGAAGCAGTCTCT
GACCAGGATCTGGAGAAACAGAAGGAAGGGGAAACAGTATCAGATTCTACAAAAGTGAGG
TCAAGCTCCATGCGACTTAATGATGTATCCTCGACACAAGCTGAAGCAGTATCCGATAAT
AGCAGATCAACAGAAAATGCAGAGCACTCTTGTCCTATATCATGTTCTGCTGCAGCTACA
CAGGAACCTTCAAGCTTGAGACAGTCAATTCCTCCAGTGGCACCACATGGTGCAGCTTTT
ATTTTCAATAGATACAAACTAGACAATCGTCCCACTGCCTTCAAAGTCCTTCCACCTATG
CCAAGTGGTCTTGCAAATGTTACTGTCTTGAAGGAACATTTCTCCACTTTTGGTGACCCT
CCCGCCGTTGAGATGGAAGATTTGGAGCCTCAAGATGGTAATAATGGCTCGGAAATGTCA
AACATATCTGCTAGTATATGTTTCCCAACGCGCCGTTCTGCTGAAAGAGCATTTTCGAAT
GGCAAAATCTGGCAAGGCCAAGCTTTGCAGTTTATGTGGTTGCAGTCTAGTAATTCTACC
AAGGATATTGGTGTCAAAAAAGATGCTCATCCTGCTTTGAAGCAACCTCCAGATGCTAGT
GTGCAAACCATCCCACAAGACACACAGGAAGAAAATGCTGCAGGGATTGATGAACCTGAA
AAATATGACATAGAATGCGAGAAGCAGCCTTCAGATGCCAATGTTCAAACCAGCCCAAAA
GATCCTTTGACTGGTTCACGGGAAAGAACTGCTGCAGATATGGATGAACTTGAAAAAGCT
TATATAGGTAGCTGA