Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400010656
CDS Infomation

pacid=37451082 polypeptide=PGSC0003DMP400007445 locus=PGSC0003DMG400004162 ID=PGSC0003DMT400010656.v4.03 annot-version=v4.03
Sequence

ATGGATTTTGTGTATAAGAACCCATCAGCTCTTATTGAGGAAAGAGTACAAGATTTGTTA
TCTCGGATGACACTTGAAGAAAAAATAGGCCAAATGGCTCAGATTGAACGCAGTGTTGCT
ACCCCCTCTGTCATTACTGACCTTTCTATAGGGAGTATACTCAGTGTTGGAGGCAGTGCA
CCATTTGAGGATGCCCCATCGGAAGCTTGGGCAGATATGGTTGACAGATTTCAAAAGGCT
GCGCTGGAATCACGGCTTGGGATTCCGCTTCTTTATGGAGTTGACGCTATTCATGGCAAT
AACAATGTTTATGGTGCTACCATTTTTCCACAAAATGTGGGCCTTGGAGCCACCAGAGAT
GCAGATTTGGTTCAGAAGATTGGGATTGTGACTGCTCTTGAAGTCAGGGCTTGTGGCATT
AACTATACTTTTGCTCCCTGTGTTGCTGTATGTAGAGATCCCAGGTGGGGAAGATGCTAT
GAGAGTTATGGAGAAGACACCGAACTTATTAGGAAGATGACCTCAATTGTCACAGGCTTG
CAAGGGCAACCACCTCCTGGATACCCCCAAAACTATCCTTTTCTAGCTGGAAGAGACAAG
GTTGTTGCCTGTGCAAAGCACTTTGTTGGAGATGGGGGTACTGACCGAGGTATAAATGAG
GGAAATACCATATCATCGTATGATGATCTAGAGAGAATACATATTGCCCCTTATATTGAC
TGTATTTCTCAGGGAGTTTGCACAGTAATGGCATCCTACTCTAAATGGAATGGAAGCCAC
CTGCATTCTAGCCACTTTCTTCTTACTGAAGTTTTGAAAGGGAAGCTCGGATTTAAGGGC
TTTGTTATTTCTGATTCCGAAGGACTTGACCGATTTTTCCATCCTCATGGATCTAACTAT
GACCAAAGTATTTTGGCAGCAATTAATGCAGGGATTGACATGGTGATGGTTCCTTTTCGG
TATCAATTATTTCTCGATCATTTGAAATATCTTGTGGAATCTGGGGAGATTCGAATGACC
AGAATTGATGATGCTGTTGAAAGGATCCTGAGAGTTAAGTTTGTTTCCGGAGCTTTTGAG
AACCCTTTGAGTGATAGGTCATTGTTGGATACTGTTGGTTGTAATCAACATCGTGAATTA
GCACGTGAAGCAGTTCGCAAATCACTGGTTCTTCTAAAGAATGGGAAGGATGTAACAAAA
CCATTTCTTCCGCTAGATAGAAAGGCAAAGAGAATTCTTGTAGCAGGAAAACATGCTGAT
GACCTTGGATTTCAATGCGGAGGGTGGACTAAAACATGGAAAGGAATGGGCGGAAGAATC
ACGATTGGTACAACTATTCTGGAAGCTATTAAAGATGCTGTTAGAGGGGAAACAGAACTG
GTATATGAGGAAAATCCGTCACCAGACACCTTTGCAATTCAAGACTTCTCTTATTCCATT
GTAGTTGTTGGTGAACCTCCCTATTGCGAAAGCGGTGGAGACAGCCAAGACCTCAGAATT
CCTCTTGGCGGAGAAGAACTAATAAGCTTGGTTGCAGGCAGAGTTCCAACATTGGTGATA
TTGATCTCCGGAAGGCCTTTATATATAGAGCCTTCGATTCTGGAGAAAATGGAGGCCTTT
GTTGCTGCATGGTTACCGGGTACCGAGGGAACTGGTATCACTGATGTCATTTTCGGAGAT
TTTGAATTCCATGGAAGGCTCCCTATGACATGGTTTAAAAGTGTAGATCAATTACCCCTG
CATCAAGAACAGAACTCCTATGAACCTCTCTTTTCATTCGGCTACGGATTAACTAGTAAA
AACAAGGTGCTCTAG

Peptide Sequence

PEP ID

PGSC0003DMP400007445
PEP Infomation

pacid=37451082 transcript=PGSC0003DMT400010656 locus=PGSC0003DMG400004162 ID=PGSC0003DMT400010656.v4.03 annot-version=v4.03
Sequence

MDFVYKNPSALIEERVQDLLSRMTLEEKIGQMAQIERSVATPSVITDLSIGSILSVGGSA
PFEDAPSEAWADMVDRFQKAALESRLGIPLLYGVDAIHGNNNVYGATIFPQNVGLGATRD
ADLVQKIGIVTALEVRACGINYTFAPCVAVCRDPRWGRCYESYGEDTELIRKMTSIVTGL
QGQPPPGYPQNYPFLAGRDKVVACAKHFVGDGGTDRGINEGNTISSYDDLERIHIAPYID
CISQGVCTVMASYSKWNGSHLHSSHFLLTEVLKGKLGFKGFVISDSEGLDRFFHPHGSNY
DQSILAAINAGIDMVMVPFRYQLFLDHLKYLVESGEIRMTRIDDAVERILRVKFVSGAFE
NPLSDRSLLDTVGCNQHRELAREAVRKSLVLLKNGKDVTKPFLPLDRKAKRILVAGKHAD
DLGFQCGGWTKTWKGMGGRITIGTTILEAIKDAVRGETELVYEENPSPDTFAIQDFSYSI
VVVGEPPYCESGGDSQDLRIPLGGEELISLVAGRVPTLVILISGRPLYIEPSILEKMEAF
VAAWLPGTEGTGITDVIFGDFEFHGRLPMTWFKSVDQLPLHQEQNSYEPLFSFGYGLTSK
NKVL*

Transcript Sequence

Transcript ID

PGSC0003DMT400010656
Transcript Infomation

pacid=37451082 locus=PGSC0003DMG400004162 ID=PGSC0003DMT400010656.v4.03 annot-version=v4.03
Sequence

ATGGATTTTGTGTATAAGAACCCATCAGCTCTTATTGAGGAAAGAGTACAAGATTTGTTA
TCTCGGATGACACTTGAAGAAAAAATAGGCCAAATGGCTCAGATTGAACGCAGTGTTGCT
ACCCCCTCTGTCATTACTGACCTTTCTATAGGGAGTATACTCAGTGTTGGAGGCAGTGCA
CCATTTGAGGATGCCCCATCGGAAGCTTGGGCAGATATGGTTGACAGATTTCAAAAGGCT
GCGCTGGAATCACGGCTTGGGATTCCGCTTCTTTATGGAGTTGACGCTATTCATGGCAAT
AACAATGTTTATGGTGCTACCATTTTTCCACAAAATGTGGGCCTTGGAGCCACCAGAGAT
GCAGATTTGGTTCAGAAGATTGGGATTGTGACTGCTCTTGAAGTCAGGGCTTGTGGCATT
AACTATACTTTTGCTCCCTGTGTTGCTGTATGTAGAGATCCCAGGTGGGGAAGATGCTAT
GAGAGTTATGGAGAAGACACCGAACTTATTAGGAAGATGACCTCAATTGTCACAGGCTTG
CAAGGGCAACCACCTCCTGGATACCCCCAAAACTATCCTTTTCTAGCTGGAAGAGACAAG
GTTGTTGCCTGTGCAAAGCACTTTGTTGGAGATGGGGGTACTGACCGAGGTATAAATGAG
GGAAATACCATATCATCGTATGATGATCTAGAGAGAATACATATTGCCCCTTATATTGAC
TGTATTTCTCAGGGAGTTTGCACAGTAATGGCATCCTACTCTAAATGGAATGGAAGCCAC
CTGCATTCTAGCCACTTTCTTCTTACTGAAGTTTTGAAAGGGAAGCTCGGATTTAAGGGC
TTTGTTATTTCTGATTCCGAAGGACTTGACCGATTTTTCCATCCTCATGGATCTAACTAT
GACCAAAGTATTTTGGCAGCAATTAATGCAGGGATTGACATGGTGATGGTTCCTTTTCGG
TATCAATTATTTCTCGATCATTTGAAATATCTTGTGGAATCTGGGGAGATTCGAATGACC
AGAATTGATGATGCTGTTGAAAGGATCCTGAGAGTTAAGTTTGTTTCCGGAGCTTTTGAG
AACCCTTTGAGTGATAGGTCATTGTTGGATACTGTTGGTTGTAATCAACATCGTGAATTA
GCACGTGAAGCAGTTCGCAAATCACTGGTTCTTCTAAAGAATGGGAAGGATGTAACAAAA
CCATTTCTTCCGCTAGATAGAAAGGCAAAGAGAATTCTTGTAGCAGGAAAACATGCTGAT
GACCTTGGATTTCAATGCGGAGGGTGGACTAAAACATGGAAAGGAATGGGCGGAAGAATC
ACGATTGGTACAACTATTCTGGAAGCTATTAAAGATGCTGTTAGAGGGGAAACAGAACTG
GTATATGAGGAAAATCCGTCACCAGACACCTTTGCAATTCAAGACTTCTCTTATTCCATT
GTAGTTGTTGGTGAACCTCCCTATTGCGAAAGCGGTGGAGACAGCCAAGACCTCAGAATT
CCTCTTGGCGGAGAAGAACTAATAAGCTTGGTTGCAGGCAGAGTTCCAACATTGGTGATA
TTGATCTCCGGAAGGCCTTTATATATAGAGCCTTCGATTCTGGAGAAAATGGAGGCCTTT
GTTGCTGCATGGTTACCGGGTACCGAGGGAACTGGTATCACTGATGTCATTTTCGGAGAT
TTTGAATTCCATGGAAGGCTCCCTATGACATGGTTTAAAAGTGTAGATCAATTACCCCTG
CATCAAGAACAGAACTCCTATGAACCTCTCTTTTCATTCGGCTACGGATTAACTAGTAAA
AACAAGGTGCTCTAG