Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400010632
CDS Infomation

pacid=37451990 polypeptide=PGSC0003DMP400007424 locus=PGSC0003DMG400004151 ID=PGSC0003DMT400010632.v4.03 annot-version=v4.03
Sequence

ATGGCGTCTGTCCAAACTGCTTTGACATCACTCCTATCCAAGAAAGGGAACAATCATCCA
CAAGTAAATGTTCCAAGAAGTTCCTTCTTGCCAGGGTTCGATTTGACGGGGCAAGTTGCT
GTTACGAGGAGAAGGGAGACGCGTTTCAATTCTTTTTCAAGCCCGAGAGCAACACTAACC
TTTGATCCTCCCAGTACTGATAATAAAGAGAAGACAAAGCCAAAGCACACTGTTGATCCT
AATGCTCCTGATTTCCTGCCACTTCCAGCATTCGAACAATGCTTTCCAAAAAGCTCCAAG
GAATACAGTGAAGTTATGCATGAAGAAACTGGTCAAGTGCTCAAAGTCCCATTTCGACGT
ATCCATCTTTCCGGGGATGAACCACATTTTGACACTTATGATACCAGTGGTCCTCAGGGT
GTAAACCCGCATGTTGGACTTCCCAAGCTGCGCACGGAGTGGATTAACAGGAGGGAGAAG
TTAGGAGGACCAAGGTATACTCAAATGTTCTATGCTAAGCAGGGAATCATAACTGAGGAA
ATGGCATACTGTGCTGCTCGTGAAAAAATGGATCCGGAATTTGTGAGGTCAGAAGTTGCT
CGAGGCCGTGCAATCATCCCTTCAAACAAGAAGCACCCTGAGTTGGAGCCAATGATAGTA
GGAAGAAAGTTCTTAGTGAAAGTCAATGCCAACATCGGAAACTCTGCTGTTGTAAGCTCA
ATTGAAGAAGAAGTTCACAAGCTTCAATGGGCAACAATGTGGGGTGCAGATACGATTATG
GATCTCTCTACTGGTCGTCACATCCACGAGACTCGTGAGTGGATCTTGCGTAATTCTGCT
GTACCAGTAGGCACTGTGCCAATTTACCAAGCACTAGAAAAAGTAAACGGCATTGCTGAG
AATCTGAGTTGGGAAGTTTTCAGAGAGACCTTAATTGAACAAGCTGAGCAAGGTGTTGAT
TACTTCACAATCCATGCCGGAGTCCTTCTTAGGTACATCCCACTGACAGCAAAACGGATG
ACTGGAATTGTTTCTCGTGGAGGCTCAATTCATGCAAAGTGGTGCTTAGCTTATCACAAG
GAGAATTTCGCTTATGAACATTGGGATGACATACTTGACATCTGTAATCAGTACGATATA
TCGTTATCAATTGGTGATGGACTGAGACCTGGTTCAATTTATGATGCAAATGATACTGCT
CAGTTTGCTGAGCTCTTGACTCAAGGGGAGCTGACTCGCCGAGCTTGGGAAAAGGATGTA
CAGGTTATGAATGAAGGGCCTGGACACGTACCAATGCATAAGATTCCCGAGAACATGCAG
AAACAGCTAGAGTGGTGCAATGAAGCACCATTTTACACTCTTGGACCATTGACAACTGAT
ATAGCTCCCGGATATGATCATATCACCTCAGCTATCGGTGCAGCCAATATAGGAGCACTC
GGGACTGCACTTTTGTGTTACGTCACTCCAAAAGAGCATCTTGGTCTGCCTAATCGCGAT
GATGTGAAGACAGGGGTAATATCATACAAGATAGCTGCTCATGCAGCTGATCTTGCAAAA
GGTCACCCGCTATCTCAAGCTTGGGATGATGCACTTAGCAAGGCAAGATTTGAGTTCAGA
TGGATGGACCAATTCGCTTTGTCATTGGACCCCGTTACTGCAATGTCCTTCCACGATGAA
ACTTTACCAGCCGATGGGGCTAAAGTGGCACATTTCTGCTCGATGTGCGGGCCTAAGTTT
TGCTCCATGAAAATAACCGAAGATATAAGGAAGTATGCTGAAAATCATGGTTATGGAAAT
GCAGAGGAAGCCATTCAGCAGGGCATGGATGCTATGAGTGCAGCGTTTCAAGCTGCTAAA
AAAACCATTAGTGGGGAACAACACGGTGAGGTTGGCGGTGAGATCTACTTGCCAGAAAAT
TACATCAACTCTTTGAAGAGCCAAAGGAATATATAA

Peptide Sequence

PEP ID

PGSC0003DMP400007424
PEP Infomation

pacid=37451990 transcript=PGSC0003DMT400010632 locus=PGSC0003DMG400004151 ID=PGSC0003DMT400010632.v4.03 annot-version=v4.03
Sequence

MASVQTALTSLLSKKGNNHPQVNVPRSSFLPGFDLTGQVAVTRRRETRFNSFSSPRATLT
FDPPSTDNKEKTKPKHTVDPNAPDFLPLPAFEQCFPKSSKEYSEVMHEETGQVLKVPFRR
IHLSGDEPHFDTYDTSGPQGVNPHVGLPKLRTEWINRREKLGGPRYTQMFYAKQGIITEE
MAYCAAREKMDPEFVRSEVARGRAIIPSNKKHPELEPMIVGRKFLVKVNANIGNSAVVSS
IEEEVHKLQWATMWGADTIMDLSTGRHIHETREWILRNSAVPVGTVPIYQALEKVNGIAE
NLSWEVFRETLIEQAEQGVDYFTIHAGVLLRYIPLTAKRMTGIVSRGGSIHAKWCLAYHK
ENFAYEHWDDILDICNQYDISLSIGDGLRPGSIYDANDTAQFAELLTQGELTRRAWEKDV
QVMNEGPGHVPMHKIPENMQKQLEWCNEAPFYTLGPLTTDIAPGYDHITSAIGAANIGAL
GTALLCYVTPKEHLGLPNRDDVKTGVISYKIAAHAADLAKGHPLSQAWDDALSKARFEFR
WMDQFALSLDPVTAMSFHDETLPADGAKVAHFCSMCGPKFCSMKITEDIRKYAENHGYGN
AEEAIQQGMDAMSAAFQAAKKTISGEQHGEVGGEIYLPENYINSLKSQRNI*

Transcript Sequence

Transcript ID

PGSC0003DMT400010632
Transcript Infomation

pacid=37451990 locus=PGSC0003DMG400004151 ID=PGSC0003DMT400010632.v4.03 annot-version=v4.03
Sequence

ATGGCGTCTGTCCAAACTGCTTTGACATCACTCCTATCCAAGAAAGGGAACAATCATCCA
CAAGTAAATGTTCCAAGAAGTTCCTTCTTGCCAGGGTTCGATTTGACGGGGCAAGTTGCT
GTTACGAGGAGAAGGGAGACGCGTTTCAATTCTTTTTCAAGCCCGAGAGCAACACTAACC
TTTGATCCTCCCAGTACTGATAATAAAGAGAAGACAAAGCCAAAGCACACTGTTGATCCT
AATGCTCCTGATTTCCTGCCACTTCCAGCATTCGAACAATGCTTTCCAAAAAGCTCCAAG
GAATACAGTGAAGTTATGCATGAAGAAACTGGTCAAGTGCTCAAAGTCCCATTTCGACGT
ATCCATCTTTCCGGGGATGAACCACATTTTGACACTTATGATACCAGTGGTCCTCAGGGT
GTAAACCCGCATGTTGGACTTCCCAAGCTGCGCACGGAGTGGATTAACAGGAGGGAGAAG
TTAGGAGGACCAAGGTATACTCAAATGTTCTATGCTAAGCAGGGAATCATAACTGAGGAA
ATGGCATACTGTGCTGCTCGTGAAAAAATGGATCCGGAATTTGTGAGGTCAGAAGTTGCT
CGAGGCCGTGCAATCATCCCTTCAAACAAGAAGCACCCTGAGTTGGAGCCAATGATAGTA
GGAAGAAAGTTCTTAGTGAAAGTCAATGCCAACATCGGAAACTCTGCTGTTGTAAGCTCA
ATTGAAGAAGAAGTTCACAAGCTTCAATGGGCAACAATGTGGGGTGCAGATACGATTATG
GATCTCTCTACTGGTCGTCACATCCACGAGACTCGTGAGTGGATCTTGCGTAATTCTGCT
GTACCAGTAGGCACTGTGCCAATTTACCAAGCACTAGAAAAAGTAAACGGCATTGCTGAG
AATCTGAGTTGGGAAGTTTTCAGAGAGACCTTAATTGAACAAGCTGAGCAAGGTGTTGAT
TACTTCACAATCCATGCCGGAGTCCTTCTTAGGTACATCCCACTGACAGCAAAACGGATG
ACTGGAATTGTTTCTCGTGGAGGCTCAATTCATGCAAAGTGGTGCTTAGCTTATCACAAG
GAGAATTTCGCTTATGAACATTGGGATGACATACTTGACATCTGTAATCAGTACGATATA
TCGTTATCAATTGGTGATGGACTGAGACCTGGTTCAATTTATGATGCAAATGATACTGCT
CAGTTTGCTGAGCTCTTGACTCAAGGGGAGCTGACTCGCCGAGCTTGGGAAAAGGATGTA
CAGGTTATGAATGAAGGGCCTGGACACGTACCAATGCATAAGATTCCCGAGAACATGCAG
AAACAGCTAGAGTGGTGCAATGAAGCACCATTTTACACTCTTGGACCATTGACAACTGAT
ATAGCTCCCGGATATGATCATATCACCTCAGCTATCGGTGCAGCCAATATAGGAGCACTC
GGGACTGCACTTTTGTGTTACGTCACTCCAAAAGAGCATCTTGGTCTGCCTAATCGCGAT
GATGTGAAGACAGGGGTAATATCATACAAGATAGCTGCTCATGCAGCTGATCTTGCAAAA
GGTCACCCGCTATCTCAAGCTTGGGATGATGCACTTAGCAAGGCAAGATTTGAGTTCAGA
TGGATGGACCAATTCGCTTTGTCATTGGACCCCGTTACTGCAATGTCCTTCCACGATGAA
ACTTTACCAGCCGATGGGGCTAAAGTGGCACATTTCTGCTCGATGTGCGGGCCTAAGTTT
TGCTCCATGAAAATAACCGAAGATATAAGGAAGTATGCTGAAAATCATGGTTATGGAAAT
GCAGAGGAAGCCATTCAGCAGGGCATGGATGCTATGAGTGCAGCGTTTCAAGCTGCTAAA
AAAACCATTAGTGGGGAACAACACGGTGAGGTTGGCGGTGAGATCTACTTGCCAGAAAAT
TACATCAACTCTTTGAAGAGCCAAAGGAATATATAA