Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400010491
CDS Infomation

pacid=37432390 polypeptide=PGSC0003DMP400007326 locus=PGSC0003DMG400004098 ID=PGSC0003DMT400010491.v4.03 annot-version=v4.03
Sequence

ATGAAGAAGAGACTCAGAGAATCCAAAATCAAACACCAAACAACCATTATTGATACCACC
TTAACACAAGGTACTTCTCTGATAAAACATTTAGCTGCTTGTAACGCTTCCATTAGGTCA
AAAGCATTCGCACATCTTCAAACGTGGCTTGTAACACAAACCCAACTCGATGATGATGAT
ATGAAGAAGTTGTGGAAGGGACTTTTCTACTGTCTTTGGCATTCTGATAAAGCCCCTGCT
CAAGCTCTACTCATCAACCGTATTTGCTCTATGGTGAAAACTCTTGATTTCGGTCTTTGT
TTACATTATTTTTCTGCCTTCTTGATAACCCTTCGTCGTGAATGGAATGGTATTGACCAT
TTAAGATTGGACAAGTTTTACTTGCTAATTAGGAAATTTCTTAGGTCAGTTTTTGAATTG
ATGAGAAAATATGATTGGAATTTGGAGATTATGGGAAAATGTACTGAGATATTGGAAAAT
AATGCTTTTCTTGCTACAGATAAGTTGTTGGGTCATGGGGTGAATTATCATATTGCTTCT
GTTTTTCTTGATGAGATAAAAGGGTGTTTTATTCCGGTCCAAGATGATGTGGTTGTCTGT
TTGTTTAAGCCCTTTTTGAGTGTATTGGGGAAGTCTGAGGATAAAATTATGGTTGGGAAA
GTGAAAAATTGTGTGTTTGAGGAGTTGTTAAAGATAGGGAGGAGTTTGCTGGAGAGGAGG
AAGGAAGGTGTGGAGGGGGATGAGAGCTATGGTGATGTGGCATTTGGGGTTATTGCATTG
AAAACAGGGTTTTCAGGAAAGCTTTTTGAGGTTGGTTCATCCCTGGATTGTGTTCAGGGT
AATAGGAAGGTGGTTTTGAAATTGCACGAGGAGTTCTTGAGGTTGGAGAAGGAGTTTGAA
GCTTCGGGGATTGAATTTAGTCTGCCTGAGACGAATGAGGTTGTTGATGATGGTGAAGAG
GTGCCTCAGTTAATACCCATTGAGGATAGTTTGACTGGTAAAGTGGGTGACTTAGAAGTG
GCTGAGGATGAGAATGATGAAGGATTTGGTGATGAGCCTGTAAGGAAATGCAAGAAGGTG
AAGAGAGCAGAAGATGGAGGCAGTAAAAAGGCTAAGAAGAAAGAAAAGAAAAAGAAGGTT
TCTGAGAATGACACTTTGGTTGAGGAGAATGAGACCAATGAGCTTGAGAGTACTAAACGG
GAGAAGAAGAAAAAGAAAAAGAAGAAAAATGGGCTTAGTAATGGTGACAGAAAGGAGAAC
ATGATTACTATTAATGGTGATAGTTCCAATTACGAGCTGGTCATTGATAACAAAGTGACT
TTTAATGAAGAAGTGATTTCAAATCTTCAGATGCAGTTTGAGAAGGTTGCTGCTGAAGTT
GCTTCAGACGATGACAATGATTCATCTCACACACCTACAATTTCTATGAAAAAGAAGAGA
AAGAGAGGAAAAATTGCTGAGGGAACAGAGTCTTGCATCCATGTTATAAGTAGTGAAGGG
GATGCTGGTACAAAGAGCACAGAGAAAAGTTCAAAGAAGGTAAGGTTTGCTATGAAGAAC
AACCTGGTATGGAAGCCAAACAGTCCAATGCCTCCACAAAACTTACGGTTGCCACCTACT
CTTACTCCCCGAGGTAGTGCTTTGAAGAAGGGGGTGCCTCCCGGCCCCATAAGAGAGATG
CCTCTCTCCATGAAGAAGATGAAACAGAAAAAGAAAGGCCGCAAGATACTAAGGACCGTC
TCCCCTGCCATGAAGCGACTGAAAAAGATGAAAGCTATGTCTACTTAG

Peptide Sequence

PEP ID

PGSC0003DMP400007326
PEP Infomation

pacid=37432390 transcript=PGSC0003DMT400010491 locus=PGSC0003DMG400004098 ID=PGSC0003DMT400010491.v4.03 annot-version=v4.03
Sequence

MKKRLRESKIKHQTTIIDTTLTQGTSLIKHLAACNASIRSKAFAHLQTWLVTQTQLDDDD
MKKLWKGLFYCLWHSDKAPAQALLINRICSMVKTLDFGLCLHYFSAFLITLRREWNGIDH
LRLDKFYLLIRKFLRSVFELMRKYDWNLEIMGKCTEILENNAFLATDKLLGHGVNYHIAS
VFLDEIKGCFIPVQDDVVVCLFKPFLSVLGKSEDKIMVGKVKNCVFEELLKIGRSLLERR
KEGVEGDESYGDVAFGVIALKTGFSGKLFEVGSSLDCVQGNRKVVLKLHEEFLRLEKEFE
ASGIEFSLPETNEVVDDGEEVPQLIPIEDSLTGKVGDLEVAEDENDEGFGDEPVRKCKKV
KRAEDGGSKKAKKKEKKKKVSENDTLVEENETNELESTKREKKKKKKKKNGLSNGDRKEN
MITINGDSSNYELVIDNKVTFNEEVISNLQMQFEKVAAEVASDDDNDSSHTPTISMKKKR
KRGKIAEGTESCIHVISSEGDAGTKSTEKSSKKVRFAMKNNLVWKPNSPMPPQNLRLPPT
LTPRGSALKKGVPPGPIREMPLSMKKMKQKKKGRKILRTVSPAMKRLKKMKAMST*

Transcript Sequence

Transcript ID

PGSC0003DMT400010491
Transcript Infomation

pacid=37432390 locus=PGSC0003DMG400004098 ID=PGSC0003DMT400010491.v4.03 annot-version=v4.03
Sequence

ATGAAGAAGAGACTCAGAGAATCCAAAATCAAACACCAAACAACCATTATTGATACCACC
TTAACACAAGGTACTTCTCTGATAAAACATTTAGCTGCTTGTAACGCTTCCATTAGGTCA
AAAGCATTCGCACATCTTCAAACGTGGCTTGTAACACAAACCCAACTCGATGATGATGAT
ATGAAGAAGTTGTGGAAGGGACTTTTCTACTGTCTTTGGCATTCTGATAAAGCCCCTGCT
CAAGCTCTACTCATCAACCGTATTTGCTCTATGGTGAAAACTCTTGATTTCGGTCTTTGT
TTACATTATTTTTCTGCCTTCTTGATAACCCTTCGTCGTGAATGGAATGGTATTGACCAT
TTAAGATTGGACAAGTTTTACTTGCTAATTAGGAAATTTCTTAGGTCAGTTTTTGAATTG
ATGAGAAAATATGATTGGAATTTGGAGATTATGGGAAAATGTACTGAGATATTGGAAAAT
AATGCTTTTCTTGCTACAGATAAGTTGTTGGGTCATGGGGTGAATTATCATATTGCTTCT
GTTTTTCTTGATGAGATAAAAGGGTGTTTTATTCCGGTCCAAGATGATGTGGTTGTCTGT
TTGTTTAAGCCCTTTTTGAGTGTATTGGGGAAGTCTGAGGATAAAATTATGGTTGGGAAA
GTGAAAAATTGTGTGTTTGAGGAGTTGTTAAAGATAGGGAGGAGTTTGCTGGAGAGGAGG
AAGGAAGGTGTGGAGGGGGATGAGAGCTATGGTGATGTGGCATTTGGGGTTATTGCATTG
AAAACAGGGTTTTCAGGAAAGCTTTTTGAGGTTGGTTCATCCCTGGATTGTGTTCAGGGT
AATAGGAAGGTGGTTTTGAAATTGCACGAGGAGTTCTTGAGGTTGGAGAAGGAGTTTGAA
GCTTCGGGGATTGAATTTAGTCTGCCTGAGACGAATGAGGTTGTTGATGATGGTGAAGAG
GTGCCTCAGTTAATACCCATTGAGGATAGTTTGACTGGTAAAGTGGGTGACTTAGAAGTG
GCTGAGGATGAGAATGATGAAGGATTTGGTGATGAGCCTGTAAGGAAATGCAAGAAGGTG
AAGAGAGCAGAAGATGGAGGCAGTAAAAAGGCTAAGAAGAAAGAAAAGAAAAAGAAGGTT
TCTGAGAATGACACTTTGGTTGAGGAGAATGAGACCAATGAGCTTGAGAGTACTAAACGG
GAGAAGAAGAAAAAGAAAAAGAAGAAAAATGGGCTTAGTAATGGTGACAGAAAGGAGAAC
ATGATTACTATTAATGGTGATAGTTCCAATTACGAGCTGGTCATTGATAACAAAGTGACT
TTTAATGAAGAAGTGATTTCAAATCTTCAGATGCAGTTTGAGAAGGTTGCTGCTGAAGTT
GCTTCAGACGATGACAATGATTCATCTCACACACCTACAATTTCTATGAAAAAGAAGAGA
AAGAGAGGAAAAATTGCTGAGGGAACAGAGTCTTGCATCCATGTTATAAGTAGTGAAGGG
GATGCTGGTACAAAGAGCACAGAGAAAAGTTCAAAGAAGGTAAGGTTTGCTATGAAGAAC
AACCTGGTATGGAAGCCAAACAGTCCAATGCCTCCACAAAACTTACGGTTGCCACCTACT
CTTACTCCCCGAGGTAGTGCTTTGAAGAAGGGGGTGCCTCCCGGCCCCATAAGAGAGATG
CCTCTCTCCATGAAGAAGATGAAACAGAAAAAGAAAGGCCGCAAGATACTAAGGACCGTC
TCCCCTGCCATGAAGCGACTGAAAAAGATGAAAGCTATGTCTACTTAG