Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400010484
CDS Infomation

pacid=37433253 polypeptide=PGSC0003DMP400007322 locus=PGSC0003DMG400004095 ID=PGSC0003DMT400010484.v4.03 annot-version=v4.03
Sequence

ATGGCTCATTCAGCTATCTCTCAGGTGTCAGTTGCGGTTCCTCTCCAAACGGATTCCTCT
TTCCGAAGATCTACGTTTAAGGCTACAAGCTTAACATTCAGTGATAAATTATGCATCTCT
ATGCCATCTATCGATCTAAAAGCGGCACGATCCAGAAGCCAATACATAGTTTGCATGTCA
GTGCAACAAGCTAGCAAAGCCAAGGTTTCAGTTTCACCTTTATCACTTGAAGATGCAAAA
GAACCACCCTTGAATATCTACAAGCCCAAGGAACCATACACAGCGACAATTGTCTCTGTT
GAAAGAATTGTAGGCCCAAAAGCTCCCGGGGAGACTTGTCATATTGTCATTGATCATGAT
GGCAACCTTCCTTACTGGGAAGGACAAAGTTATGGTGTCGTTCCTCCTGGTGAAAACCCC
AAGAAACCAGGGAGTCCCCACAATGTTCGTCTATATTCAATTGCATCCACCAGATATGGG
GACTCTTTTGATGGGAAAACGGCCAGCTTGTGTGTCAGACGAGCTGTCTACTATGATCCT
GAGACAGGAAAAGAAGACCCATCCAAAAATGGTGTTTGCAGCAATTTCCTATGCAATGCG
AAGCCTGGTGACAAAGTGAAGATCACAGGTCCTTCTGGTAAGATAATGCTTCTACCTGAA
GATAATCTAAATGCCACACACATCATGATTGGAACTGGAACTGGTGTGGCTCCCTTCAGA
GGCTACCTTCGTCGTATGTTCATGGAGTCCGTTCCAATCAAGTTTAATGGTCTTGCTTGG
CTTTTCCTTGGAGTTGCAAACACTGATAGTCTTCTGTACGACGATGAATTCACCAAGTAT
CTCAGTGACTATCCAGGCAATTTCAGATATGACCGTGCTCTTAGTCGAGAACAAAAGAAC
AATAAAGGGGGAAAGATGTATGTTCAGGATAAAATTGAGGAATACAGCGATGAGATCTTC
AAACTGTTGGATGAAGGAGCTCACATCTATTTCTGTGGGTTGAAGGGTATGATGCCCGGA
ATCCAGGATACCTTGAAGAGGGTTGCTGAGGAGAGAGGTGAGAGCTGGGAGCAGAAGCTT
TCACAACTCAAAAAGAACAAGCAATGGCATGTTGAAGTCTACTAA

Peptide Sequence

PEP ID

PGSC0003DMP400007322
PEP Infomation

pacid=37433253 transcript=PGSC0003DMT400010484 locus=PGSC0003DMG400004095 ID=PGSC0003DMT400010484.v4.03 annot-version=v4.03
Sequence

MAHSAISQVSVAVPLQTDSSFRRSTFKATSLTFSDKLCISMPSIDLKAARSRSQYIVCMS
VQQASKAKVSVSPLSLEDAKEPPLNIYKPKEPYTATIVSVERIVGPKAPGETCHIVIDHD
GNLPYWEGQSYGVVPPGENPKKPGSPHNVRLYSIASTRYGDSFDGKTASLCVRRAVYYDP
ETGKEDPSKNGVCSNFLCNAKPGDKVKITGPSGKIMLLPEDNLNATHIMIGTGTGVAPFR
GYLRRMFMESVPIKFNGLAWLFLGVANTDSLLYDDEFTKYLSDYPGNFRYDRALSREQKN
NKGGKMYVQDKIEEYSDEIFKLLDEGAHIYFCGLKGMMPGIQDTLKRVAEERGESWEQKL
SQLKKNKQWHVEVY*

Transcript Sequence

Transcript ID

PGSC0003DMT400010484
Transcript Infomation

pacid=37433253 locus=PGSC0003DMG400004095 ID=PGSC0003DMT400010484.v4.03 annot-version=v4.03
Sequence

ATGGCTCATTCAGCTATCTCTCAGGTGTCAGTTGCGGTTCCTCTCCAAACGGATTCCTCT
TTCCGAAGATCTACGTTTAAGGCTACAAGCTTAACATTCAGTGATAAATTATGCATCTCT
ATGCCATCTATCGATCTAAAAGCGGCACGATCCAGAAGCCAATACATAGTTTGCATGTCA
GTGCAACAAGCTAGCAAAGCCAAGGTTTCAGTTTCACCTTTATCACTTGAAGATGCAAAA
GAACCACCCTTGAATATCTACAAGCCCAAGGAACCATACACAGCGACAATTGTCTCTGTT
GAAAGAATTGTAGGCCCAAAAGCTCCCGGGGAGACTTGTCATATTGTCATTGATCATGAT
GGCAACCTTCCTTACTGGGAAGGACAAAGTTATGGTGTCGTTCCTCCTGGTGAAAACCCC
AAGAAACCAGGGAGTCCCCACAATGTTCGTCTATATTCAATTGCATCCACCAGATATGGG
GACTCTTTTGATGGGAAAACGGCCAGCTTGTGTGTCAGACGAGCTGTCTACTATGATCCT
GAGACAGGAAAAGAAGACCCATCCAAAAATGGTGTTTGCAGCAATTTCCTATGCAATGCG
AAGCCTGGTGACAAAGTGAAGATCACAGGTCCTTCTGGTAAGATAATGCTTCTACCTGAA
GATAATCTAAATGCCACACACATCATGATTGGAACTGGAACTGGTGTGGCTCCCTTCAGA
GGCTACCTTCGTCGTATGTTCATGGAGTCCGTTCCAATCAAGTTTAATGGTCTTGCTTGG
CTTTTCCTTGGAGTTGCAAACACTGATAGTCTTCTGTACGACGATGAATTCACCAAGTAT
CTCAGTGACTATCCAGGCAATTTCAGATATGACCGTGCTCTTAGTCGAGAACAAAAGAAC
AATAAAGGGGGAAAGATGTATGTTCAGGATAAAATTGAGGAATACAGCGATGAGATCTTC
AAACTGTTGGATGAAGGAGCTCACATCTATTTCTGTGGGTTGAAGGGTATGATGCCCGGA
ATCCAGGATACCTTGAAGAGGGTTGCTGAGGAGAGAGGTGAGAGCTGGGAGCAGAAGCTT
TCACAACTCAAAAAGAACAAGCAATGGCATGTTGAAGTCTACTAA