Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400010469
CDS Infomation

pacid=37431161 polypeptide=PGSC0003DMP400007309 locus=PGSC0003DMG400004090 ID=PGSC0003DMT400010469.v4.03 annot-version=v4.03
Sequence

ATGGAGAATAAAAAAAAGAGTAGTATTTTGTTGTTTGTTCTGTTTTTGTTTCTAAGTGTT
AGTAGTATTGCATTTGGTCAATTGAAAACAGACTTCTACAAAAATACATGTCCAAATGTT
GAGTCATTGGTTCGTTCTGCAGTTAGACTGAAATTTCAACAGACTTTTGTTACGGCTCCA
GCAACTCTCCGACTCTTTTTTCATGATTGCTTTGTTAGGGGTTGTGATGCATCAATGCTA
TTGGCATCACCAAATGGAAAAGCAGAGAAGGACCATCCAGATAATCTTTCATTAGCAGGT
GATGGGTTTGACACTGTTGTCAAAGCCAAAGCAGCTGTGGACAGTGACTCTAAATGCCGT
AACAAAGTATCTTGTGCGGATATTTTAGCTTTGGCCACTAGAGAAGTCGTTGCTATGACT
GGAGGCCCATTTTATCCAGTGGAGTTGGGCCGTCGTGATGGGAAAATTTCAACCTTAACC
TCAGTCCAACATCAACTTCCAGGTGAAGGATTCAACCTAGATCAGCTCAATACCATGTTT
GCCAGACGTGGCCTTAGCCAAACTGATATGATTGCATTATCAGGTGCACATACCCTTGGT
TTCTCTCATTGCAACCGTGTTTCCAAGAGGCTCTACAATTTCAACCCAAAGAGCAGTGTT
GACCCGACCCTAAACAAAGCTTACGTGGCACAATTGAAGCAAATGTGTCCATTACGGGTC
GACCCGAGAATTGCTATTAACATGGATCCAACTACACCAAATACTTTTGATAATGCTTAT
TATAAGAACCTCCAACAAGGAAAAGGTCTATTTGTCTCTGATCAAATTCTTTTCACTGAT
TCAAGATCAAGAAATACTGTCAACTTTTTTGCTTCTAATAATGATGCATTCAAACAAGCA
TTTGCCACAGCCATGACAAATTTGGGTCGGGTCGGGGTTTTGACCGGAAACCAGGGTGAG
ATCCGATTCGATTGCACTAGACCAAATTAG

Peptide Sequence

PEP ID

PGSC0003DMP400007309
PEP Infomation

pacid=37431161 transcript=PGSC0003DMT400010469 locus=PGSC0003DMG400004090 ID=PGSC0003DMT400010469.v4.03 annot-version=v4.03
Sequence

MENKKKSSILLFVLFLFLSVSSIAFGQLKTDFYKNTCPNVESLVRSAVRLKFQQTFVTAP
ATLRLFFHDCFVRGCDASMLLASPNGKAEKDHPDNLSLAGDGFDTVVKAKAAVDSDSKCR
NKVSCADILALATREVVAMTGGPFYPVELGRRDGKISTLTSVQHQLPGEGFNLDQLNTMF
ARRGLSQTDMIALSGAHTLGFSHCNRVSKRLYNFNPKSSVDPTLNKAYVAQLKQMCPLRV
DPRIAINMDPTTPNTFDNAYYKNLQQGKGLFVSDQILFTDSRSRNTVNFFASNNDAFKQA
FATAMTNLGRVGVLTGNQGEIRFDCTRPN*

Transcript Sequence

Transcript ID

PGSC0003DMT400010469
Transcript Infomation

pacid=37431161 locus=PGSC0003DMG400004090 ID=PGSC0003DMT400010469.v4.03 annot-version=v4.03
Sequence

ATGGAGAATAAAAAAAAGAGTAGTATTTTGTTGTTTGTTCTGTTTTTGTTTCTAAGTGTT
AGTAGTATTGCATTTGGTCAATTGAAAACAGACTTCTACAAAAATACATGTCCAAATGTT
GAGTCATTGGTTCGTTCTGCAGTTAGACTGAAATTTCAACAGACTTTTGTTACGGCTCCA
GCAACTCTCCGACTCTTTTTTCATGATTGCTTTGTTAGGGGTTGTGATGCATCAATGCTA
TTGGCATCACCAAATGGAAAAGCAGAGAAGGACCATCCAGATAATCTTTCATTAGCAGGT
GATGGGTTTGACACTGTTGTCAAAGCCAAAGCAGCTGTGGACAGTGACTCTAAATGCCGT
AACAAAGTATCTTGTGCGGATATTTTAGCTTTGGCCACTAGAGAAGTCGTTGCTATGACT
GGAGGCCCATTTTATCCAGTGGAGTTGGGCCGTCGTGATGGGAAAATTTCAACCTTAACC
TCAGTCCAACATCAACTTCCAGGTGAAGGATTCAACCTAGATCAGCTCAATACCATGTTT
GCCAGACGTGGCCTTAGCCAAACTGATATGATTGCATTATCAGGTGCACATACCCTTGGT
TTCTCTCATTGCAACCGTGTTTCCAAGAGGCTCTACAATTTCAACCCAAAGAGCAGTGTT
GACCCGACCCTAAACAAAGCTTACGTGGCACAATTGAAGCAAATGTGTCCATTACGGGTC
GACCCGAGAATTGCTATTAACATGGATCCAACTACACCAAATACTTTTGATAATGCTTAT
TATAAGAACCTCCAACAAGGAAAAGGTCTATTTGTCTCTGATCAAATTCTTTTCACTGAT
TCAAGATCAAGAAATACTGTCAACTTTTTTGCTTCTAATAATGATGCATTCAAACAAGCA
TTTGCCACAGCCATGACAAATTTGGGTCGGGTCGGGGTTTTGACCGGAAACCAGGGTGAG
ATCCGATTCGATTGCACTAGACCAAATTAG