Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400010461
CDS Infomation

pacid=37431624 polypeptide=PGSC0003DMP400007303 locus=PGSC0003DMG400004086 ID=PGSC0003DMT400010461.v4.03 annot-version=v4.03
Sequence

ATGCGAACGGGAGCGGGTAGTGCAGTTCAACAGACCCTCACAACAGAGGCTGCTTCAGTA
TTGAAGCTTTCTCTTAGCTTGGCCAGGAGAAGAGGCCATGCACAGGTTACTCCTCTTCAT
GTTGCTGCTATTTTGTTGAGTTCGAGATTAAGTCTTCTTCGAAAAGCTTGTCTCAAATCT
CAACAACATAATAATAATAATTATAGTTCTCATCCACTTCAGTGTAGAGCTCTTGAGTTA
TGCTTTAATGTTGCACTTAATAGACTTCCAACAAGTCCTGGTCCACTCCTTCATGGCCAG
CCTTGTTTGTCTAATGCTTTAGTTGCTGCACTCAAAAGAGCGCAAGCTCATCAGCGAAGA
GGCTGTATAGAGCAACAGCAGCAGCAGCAACAACAGCAACAACCTCTTTTAGCTATTAAA
GTTGAGTTAGAGCAACTTATTTTGTCTATTCTAGATGATCCTAGTGTTAGTAGGGTTATG
AGAGAAGCTGGTTTCTCTAGTACTGCAATTAAAAACAATATAGAGGAATCAGCTTCTTCA
TCAGTGTTTCAGTGTTATAACAATAGCTCTGCAGGTGGAATTTACACCACACCTAGCTCA
CCTACTAACACTGCAACTACTACTGAGAATAGTCCATTCAATAGTTTTTGGAATTCACAA
AACCCTATTCTCTTTTCACCTCATAAGTTCATTAATACACAATTAACATCATCAGATGTT
AAGTTGGTGTTAGATGTGTTGTTGAGAAGTAACAACAAGAGGCGAAACAGTGTGATAGTT
GGTGACTCAGTGACAAGCACAGAAGGAATAGTTGCACAACTGATGGGAAAAGTGGAGAGA
GGAGATGTGCCTGAGGAACTTAAAGGAGTTCACTTTATCAAATTTCAGTTCTCAGATGCA
CCGCTAATGTTAATGAAAAGAGAAGAAGTGGAGCTGAACATATCAGACCTGAAAAGAAAA
GTGGAATCTCTTACAAGGGGTGGGGGTAGAGGAGGAGTCATTATCTACACAGGTGACTTG
AAATGGACAGTTGACAGTACTAATAAGGAGAAAGAAAGAGGATTGTTTGTTAATTATAGT
CCAGTTGATCATCTTGTAGCTGAGATAGGAAGGCTTGTTTCTTCCTACAACAACAGCAGC
TCAAATGCAAAGGTTTGGTTGGTGGGTACAGCAAATTATCAAACTTATATCAAATGCCAA
ATGAAACAACCTCCTCTTGATATTCAATGGTCTCTTCAACCTATTTCTGTTCCATCTGGT
GGTCTAGGGTTAAGTCTCAATACTACAAGTGTCCATGAAGCAAGAATACCATTCTCTCAA
CAAATGTTTGAGAAAAAGCCAGTACTTAGCAAGGAGGAACAAGATGCACTCACTTGTTGT
GCACAATGCACTTGTAATTATGAAAAAGAAGCTATGTTGAAGTTTGGGCAGCACAAAACT
TGTACATTGAGTCCTATGTCTATCACATGTGACACTAAGGACTCTGACAAACCTCCAACA
CCATTGCCTGATTGGCTCAAACCACATGACATGGATCCAACTAACAAGGATGATTTGGCT
GAGTTGAAAGGAAAGTGGAGCAGATTGTGCAAAAATCTTCATCAAGAGAAGCCTAATCAA
AGACAAATAAGTTCAGTTGTGTGCAATGAATACAATAGCAGTGGGAAGAATTATTCATTT
AATTCATTGTATCCATGGTGGCCTAATCAGAACAGTATAATAACAGATTGCAAATCGATT
TCATTTAGTGATCCTCCAAATGTGAAGCCTAATCATGGAGCCAGCACTGTGCCAAGATTC
AGAAGACAACAATCGTGCCATATCGAGTTCAGTTTCAGCAATGGGAACTCGAAAAATGAA
TCACAATCATCAGTTGAGCCAAGCTTGGATTCTCTTAAGAACAGAGACGGGAAAGAAGTA
AAAATTACACTTGCTCTTGGGAATTCACAGGTTTCTGATATCGGTGGGAATAACGTTGAT
GAAGAGATGCTCAAAGTGTTACAAGAGAACTTGCCTTGGCAAATGGAAAACATGCATACT
ATTGTTGATGCATTGATGGATTTCAACACAATCAATAAGCAGAAGAATTGGTTGTTGATT
CAGGGGAATGACTCAATTGGGAAACAGAGATTGGCTCGAGTGATCGCTAAATCAGCATTT
GGTTCTGATGACTTGCTGTTGTGCATCAACATGAGAAACATGTCAAATCATGTTGAATTG
CTCAACAAGGCCTTAAGGAATAATGGAAGGCTTGTTGTCCTACTGGAAGATATCAATTTT
GCTGATGCAGAACTGTTGAAATTTCTTAAGGATGCTTATGAAAATCGAAGTTCTAGTCAT
TTGTTCATCGTAGCAATCAGGACTACCGATGCAACTGAACACTGCAGTGATGGAAGAGAG
TACTATTGCACAGAGTCTGTAATCCAGATGAAACTGGTGGTAAGTGAAACGAGTCCGAAT
CCTGGATCAGTATGTATTGATCATAAGAGAAAAGCTGAATGGGAATTATCTTTGCCTAAC
AAGACCAAGAGTCCAAGAAACAATGTGATGGAAGATGTCACCTCAATTGCTACTCAAAGT
GGGAAGATAATGAAGCAATTGAGCTCAAATACCCTTGACCTCAACATCAAAGCAGACGAG
GTCTATGACGAGGGTGATGTAGACGAAGCCAAAACTGAGGACTTTAGCCCCATTTCAAGT
GACTTGACTCGCGATACAGCCAATGATCAGCATCAACAAAACAACAATCCAGCACTTGGT
TTTTTGGACCTCATCAAGAACCGCCTTGTTTTGAAGCGCGATTCTTCTCAAGACAAGCAA
ATGAGAGAGGTGTTCATGTTCAAGATGAGAAGGTCATTGGAACAAGTGTGTGGGAGTAAA
ATACTAGAGAAATTTTCCTTTGATGAAATGGTGTTGGAGAAGGTATTTGAAGGGTGTGGT
TCATTTCTCAACAACTTGTTTGATGAATGGCTAAAAGACATTTTTCAAACGAGCTTGCAA
ATGATTGAAGATAAAGAAAATATTGAGATCATCAAGCTTTGTGAAGTGGAGGGAGCTAAA
TATGAGATTGGTTTCAAAGGTTCATGTCTTCCAAGAGGGATTCAAGTTTCAATCATGGAC
TAA

Peptide Sequence

PEP ID

PGSC0003DMP400007303
PEP Infomation

pacid=37431624 transcript=PGSC0003DMT400010461 locus=PGSC0003DMG400004086 ID=PGSC0003DMT400010461.v4.03 annot-version=v4.03
Sequence

MRTGAGSAVQQTLTTEAASVLKLSLSLARRRGHAQVTPLHVAAILLSSRLSLLRKACLKS
QQHNNNNYSSHPLQCRALELCFNVALNRLPTSPGPLLHGQPCLSNALVAALKRAQAHQRR
GCIEQQQQQQQQQQPLLAIKVELEQLILSILDDPSVSRVMREAGFSSTAIKNNIEESASS
SVFQCYNNSSAGGIYTTPSSPTNTATTTENSPFNSFWNSQNPILFSPHKFINTQLTSSDV
KLVLDVLLRSNNKRRNSVIVGDSVTSTEGIVAQLMGKVERGDVPEELKGVHFIKFQFSDA
PLMLMKREEVELNISDLKRKVESLTRGGGRGGVIIYTGDLKWTVDSTNKEKERGLFVNYS
PVDHLVAEIGRLVSSYNNSSSNAKVWLVGTANYQTYIKCQMKQPPLDIQWSLQPISVPSG
GLGLSLNTTSVHEARIPFSQQMFEKKPVLSKEEQDALTCCAQCTCNYEKEAMLKFGQHKT
CTLSPMSITCDTKDSDKPPTPLPDWLKPHDMDPTNKDDLAELKGKWSRLCKNLHQEKPNQ
RQISSVVCNEYNSSGKNYSFNSLYPWWPNQNSIITDCKSISFSDPPNVKPNHGASTVPRF
RRQQSCHIEFSFSNGNSKNESQSSVEPSLDSLKNRDGKEVKITLALGNSQVSDIGGNNVD
EEMLKVLQENLPWQMENMHTIVDALMDFNTINKQKNWLLIQGNDSIGKQRLARVIAKSAF
GSDDLLLCINMRNMSNHVELLNKALRNNGRLVVLLEDINFADAELLKFLKDAYENRSSSH
LFIVAIRTTDATEHCSDGREYYCTESVIQMKLVVSETSPNPGSVCIDHKRKAEWELSLPN
KTKSPRNNVMEDVTSIATQSGKIMKQLSSNTLDLNIKADEVYDEGDVDEAKTEDFSPISS
DLTRDTANDQHQQNNNPALGFLDLIKNRLVLKRDSSQDKQMREVFMFKMRRSLEQVCGSK
ILEKFSFDEMVLEKVFEGCGSFLNNLFDEWLKDIFQTSLQMIEDKENIEIIKLCEVEGAK
YEIGFKGSCLPRGIQVSIMD*

Transcript Sequence

Transcript ID

PGSC0003DMT400010461
Transcript Infomation

pacid=37431624 locus=PGSC0003DMG400004086 ID=PGSC0003DMT400010461.v4.03 annot-version=v4.03
Sequence

ATGCGAACGGGAGCGGGTAGTGCAGTTCAACAGACCCTCACAACAGAGGCTGCTTCAGTA
TTGAAGCTTTCTCTTAGCTTGGCCAGGAGAAGAGGCCATGCACAGGTTACTCCTCTTCAT
GTTGCTGCTATTTTGTTGAGTTCGAGATTAAGTCTTCTTCGAAAAGCTTGTCTCAAATCT
CAACAACATAATAATAATAATTATAGTTCTCATCCACTTCAGTGTAGAGCTCTTGAGTTA
TGCTTTAATGTTGCACTTAATAGACTTCCAACAAGTCCTGGTCCACTCCTTCATGGCCAG
CCTTGTTTGTCTAATGCTTTAGTTGCTGCACTCAAAAGAGCGCAAGCTCATCAGCGAAGA
GGCTGTATAGAGCAACAGCAGCAGCAGCAACAACAGCAACAACCTCTTTTAGCTATTAAA
GTTGAGTTAGAGCAACTTATTTTGTCTATTCTAGATGATCCTAGTGTTAGTAGGGTTATG
AGAGAAGCTGGTTTCTCTAGTACTGCAATTAAAAACAATATAGAGGAATCAGCTTCTTCA
TCAGTGTTTCAGTGTTATAACAATAGCTCTGCAGGTGGAATTTACACCACACCTAGCTCA
CCTACTAACACTGCAACTACTACTGAGAATAGTCCATTCAATAGTTTTTGGAATTCACAA
AACCCTATTCTCTTTTCACCTCATAAGTTCATTAATACACAATTAACATCATCAGATGTT
AAGTTGGTGTTAGATGTGTTGTTGAGAAGTAACAACAAGAGGCGAAACAGTGTGATAGTT
GGTGACTCAGTGACAAGCACAGAAGGAATAGTTGCACAACTGATGGGAAAAGTGGAGAGA
GGAGATGTGCCTGAGGAACTTAAAGGAGTTCACTTTATCAAATTTCAGTTCTCAGATGCA
CCGCTAATGTTAATGAAAAGAGAAGAAGTGGAGCTGAACATATCAGACCTGAAAAGAAAA
GTGGAATCTCTTACAAGGGGTGGGGGTAGAGGAGGAGTCATTATCTACACAGGTGACTTG
AAATGGACAGTTGACAGTACTAATAAGGAGAAAGAAAGAGGATTGTTTGTTAATTATAGT
CCAGTTGATCATCTTGTAGCTGAGATAGGAAGGCTTGTTTCTTCCTACAACAACAGCAGC
TCAAATGCAAAGGTTTGGTTGGTGGGTACAGCAAATTATCAAACTTATATCAAATGCCAA
ATGAAACAACCTCCTCTTGATATTCAATGGTCTCTTCAACCTATTTCTGTTCCATCTGGT
GGTCTAGGGTTAAGTCTCAATACTACAAGTGTCCATGAAGCAAGAATACCATTCTCTCAA
CAAATGTTTGAGAAAAAGCCAGTACTTAGCAAGGAGGAACAAGATGCACTCACTTGTTGT
GCACAATGCACTTGTAATTATGAAAAAGAAGCTATGTTGAAGTTTGGGCAGCACAAAACT
TGTACATTGAGTCCTATGTCTATCACATGTGACACTAAGGACTCTGACAAACCTCCAACA
CCATTGCCTGATTGGCTCAAACCACATGACATGGATCCAACTAACAAGGATGATTTGGCT
GAGTTGAAAGGAAAGTGGAGCAGATTGTGCAAAAATCTTCATCAAGAGAAGCCTAATCAA
AGACAAATAAGTTCAGTTGTGTGCAATGAATACAATAGCAGTGGGAAGAATTATTCATTT
AATTCATTGTATCCATGGTGGCCTAATCAGAACAGTATAATAACAGATTGCAAATCGATT
TCATTTAGTGATCCTCCAAATGTGAAGCCTAATCATGGAGCCAGCACTGTGCCAAGATTC
AGAAGACAACAATCGTGCCATATCGAGTTCAGTTTCAGCAATGGGAACTCGAAAAATGAA
TCACAATCATCAGTTGAGCCAAGCTTGGATTCTCTTAAGAACAGAGACGGGAAAGAAGTA
AAAATTACACTTGCTCTTGGGAATTCACAGGTTTCTGATATCGGTGGGAATAACGTTGAT
GAAGAGATGCTCAAAGTGTTACAAGAGAACTTGCCTTGGCAAATGGAAAACATGCATACT
ATTGTTGATGCATTGATGGATTTCAACACAATCAATAAGCAGAAGAATTGGTTGTTGATT
CAGGGGAATGACTCAATTGGGAAACAGAGATTGGCTCGAGTGATCGCTAAATCAGCATTT
GGTTCTGATGACTTGCTGTTGTGCATCAACATGAGAAACATGTCAAATCATGTTGAATTG
CTCAACAAGGCCTTAAGGAATAATGGAAGGCTTGTTGTCCTACTGGAAGATATCAATTTT
GCTGATGCAGAACTGTTGAAATTTCTTAAGGATGCTTATGAAAATCGAAGTTCTAGTCAT
TTGTTCATCGTAGCAATCAGGACTACCGATGCAACTGAACACTGCAGTGATGGAAGAGAG
TACTATTGCACAGAGTCTGTAATCCAGATGAAACTGGTGGTAAGTGAAACGAGTCCGAAT
CCTGGATCAGTATGTATTGATCATAAGAGAAAAGCTGAATGGGAATTATCTTTGCCTAAC
AAGACCAAGAGTCCAAGAAACAATGTGATGGAAGATGTCACCTCAATTGCTACTCAAAGT
GGGAAGATAATGAAGCAATTGAGCTCAAATACCCTTGACCTCAACATCAAAGCAGACGAG
GTCTATGACGAGGGTGATGTAGACGAAGCCAAAACTGAGGACTTTAGCCCCATTTCAAGT
GACTTGACTCGCGATACAGCCAATGATCAGCATCAACAAAACAACAATCCAGCACTTGGT
TTTTTGGACCTCATCAAGAACCGCCTTGTTTTGAAGCGCGATTCTTCTCAAGACAAGCAA
ATGAGAGAGGTGTTCATGTTCAAGATGAGAAGGTCATTGGAACAAGTGTGTGGGAGTAAA
ATACTAGAGAAATTTTCCTTTGATGAAATGGTGTTGGAGAAGGTATTTGAAGGGTGTGGT
TCATTTCTCAACAACTTGTTTGATGAATGGCTAAAAGACATTTTTCAAACGAGCTTGCAA
ATGATTGAAGATAAAGAAAATATTGAGATCATCAAGCTTTGTGAAGTGGAGGGAGCTAAA
TATGAGATTGGTTTCAAAGGTTCATGTCTTCCAAGAGGGATTCAAGTTTCAATCATGGAC
TAA