Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400010442
CDS Infomation

pacid=37450152 polypeptide=PGSC0003DMP400007284 locus=PGSC0003DMG400004078 ID=PGSC0003DMT400010442.v4.03 annot-version=v4.03
Sequence

ATGGGGCTAAAAGTAACAGCTTTAGCAGAAAGTCGTTTGGAAAAACTAAAAAGTTCTATG
TCATCCAAGTCTAGAATGAAGTTATGGATGATAAGGATCACAACATCAGTGCTTATATGG
ATTTGCTTAGTTCAATTAACGATATTGGGAGAGACTTGGGGTCCTAGAGTTTTAAAAGGA
TGGCCCCCTTGTCCTTCTCACGAATCAGCTGCAGTACTGGCTGTTAAATCGTCGTCTGAG
GTCCCTGCCAGAGTTCTTCCACCAAAGAGGGTTTACAGGAATAATGGTTACCTCATGGTT
TCATGCAATGGTGGGCTTAATCAAATGCGGTCAGCGATATGTGATATGGTTGCTATAGCA
AGATATTTGAATGTGACTCTTATTGTTCCCGAGCTGGATAAAACCTCCTTTTGGGCTGAT
TCGAGTGAATTTCAAGACATATTTGATGTTGATCACTTCATAATGTCCTTGAGAGATGAA
GTTCGAATATTGAAGGAGCTACCTCCAAGACTAAAGAGGAGGGTAGAGTTAGGAGTGACT
CATACTATGGCTCCTATTAGTTGGTCTGACATTTCCTACTACCATAATCAGATTCTTCCC
TTAATTCAGCAGTATAAAGTAGTTCATTTGAACAGGACTGATGCTCGGCTTGCCAATAAT
GGACTACCTATGGAAATTCAAAAGCTACGATGCAGAGTTAATTTTGGTGCATTGAAATTC
ACCCCTCAAATTGAAGAGTTGGGTAGAAAGGTTGTCAGAATACTTAGGCAAGAAGGTCCA
TTTATGGTTCTGCACCTGAGATACGAAATGGATATGTTAGCTTTCTCTGGCTGTACTCAG
GGATGCAAGCAGGAGGAGGTGGAAGAGTTGACAAGAATGAGATATGCTTATCCATGGTGG
AAAGAAAAAATTATAAATTCAGATTTGAAAAGAAGAGATGGTCTGTGTCCTTTGACCCCT
GAGGAAACTGCTCTTACTTTAAGGGCATTGGACATTGATCCTAGTATTCAAGTGTACATT
GCGGCTGGAGAGATTTATGGTGGAGAAAGGAGAATGGCTAGTCTTGCTGCAGCTTATCCT
AATTTGGTAAGGAAGGAGACACTACTCGAGTCCTCTGAGCTGAGGTTCTTTCAAAATCAC
TCCTCCCAAATGGCAGCATTAGATTATCTTGTTTCCTTGGAGAGCGATATCTTTGTTCCT
ACATATGATGGAAACATGGCCAAAGTTGTTGAAGGACATCGCAGATATCTTGGATACAAG
AAAACTATCTTGTTAGACAGAAAGCATCTGGTGGATTTAATAGACCAACATAATGCTGGA
TCATTGACATGGGATGAGTTCTCTACCGCTGTTAAGGAAGCTCACGCTGAACGTATGGGC
AACCCAACAAAGAGATTGGTCATTCAAGACAGACCTAAAGAGGAGGATTATTTTTACTCC
AACCCATGGGAGTGCTTAGAACCATCTTATGACGATGAACTTTAA

Peptide Sequence

PEP ID

PGSC0003DMP400007284
PEP Infomation

pacid=37450152 transcript=PGSC0003DMT400010442 locus=PGSC0003DMG400004078 ID=PGSC0003DMT400010442.v4.03 annot-version=v4.03
Sequence

MGLKVTALAESRLEKLKSSMSSKSRMKLWMIRITTSVLIWICLVQLTILGETWGPRVLKG
WPPCPSHESAAVLAVKSSSEVPARVLPPKRVYRNNGYLMVSCNGGLNQMRSAICDMVAIA
RYLNVTLIVPELDKTSFWADSSEFQDIFDVDHFIMSLRDEVRILKELPPRLKRRVELGVT
HTMAPISWSDISYYHNQILPLIQQYKVVHLNRTDARLANNGLPMEIQKLRCRVNFGALKF
TPQIEELGRKVVRILRQEGPFMVLHLRYEMDMLAFSGCTQGCKQEEVEELTRMRYAYPWW
KEKIINSDLKRRDGLCPLTPEETALTLRALDIDPSIQVYIAAGEIYGGERRMASLAAAYP
NLVRKETLLESSELRFFQNHSSQMAALDYLVSLESDIFVPTYDGNMAKVVEGHRRYLGYK
KTILLDRKHLVDLIDQHNAGSLTWDEFSTAVKEAHAERMGNPTKRLVIQDRPKEEDYFYS
NPWECLEPSYDDEL*

Transcript Sequence

Transcript ID

PGSC0003DMT400010442
Transcript Infomation

pacid=37450152 locus=PGSC0003DMG400004078 ID=PGSC0003DMT400010442.v4.03 annot-version=v4.03
Sequence

ATGGGGCTAAAAGTAACAGCTTTAGCAGAAAGTCGTTTGGAAAAACTAAAAAGTTCTATG
TCATCCAAGTCTAGAATGAAGTTATGGATGATAAGGATCACAACATCAGTGCTTATATGG
ATTTGCTTAGTTCAATTAACGATATTGGGAGAGACTTGGGGTCCTAGAGTTTTAAAAGGA
TGGCCCCCTTGTCCTTCTCACGAATCAGCTGCAGTACTGGCTGTTAAATCGTCGTCTGAG
GTCCCTGCCAGAGTTCTTCCACCAAAGAGGGTTTACAGGAATAATGGTTACCTCATGGTT
TCATGCAATGGTGGGCTTAATCAAATGCGGTCAGCGATATGTGATATGGTTGCTATAGCA
AGATATTTGAATGTGACTCTTATTGTTCCCGAGCTGGATAAAACCTCCTTTTGGGCTGAT
TCGAGTGAATTTCAAGACATATTTGATGTTGATCACTTCATAATGTCCTTGAGAGATGAA
GTTCGAATATTGAAGGAGCTACCTCCAAGACTAAAGAGGAGGGTAGAGTTAGGAGTGACT
CATACTATGGCTCCTATTAGTTGGTCTGACATTTCCTACTACCATAATCAGATTCTTCCC
TTAATTCAGCAGTATAAAGTAGTTCATTTGAACAGGACTGATGCTCGGCTTGCCAATAAT
GGACTACCTATGGAAATTCAAAAGCTACGATGCAGAGTTAATTTTGGTGCATTGAAATTC
ACCCCTCAAATTGAAGAGTTGGGTAGAAAGGTTGTCAGAATACTTAGGCAAGAAGGTCCA
TTTATGGTTCTGCACCTGAGATACGAAATGGATATGTTAGCTTTCTCTGGCTGTACTCAG
GGATGCAAGCAGGAGGAGGTGGAAGAGTTGACAAGAATGAGATATGCTTATCCATGGTGG
AAAGAAAAAATTATAAATTCAGATTTGAAAAGAAGAGATGGTCTGTGTCCTTTGACCCCT
GAGGAAACTGCTCTTACTTTAAGGGCATTGGACATTGATCCTAGTATTCAAGTGTACATT
GCGGCTGGAGAGATTTATGGTGGAGAAAGGAGAATGGCTAGTCTTGCTGCAGCTTATCCT
AATTTGGTAAGGAAGGAGACACTACTCGAGTCCTCTGAGCTGAGGTTCTTTCAAAATCAC
TCCTCCCAAATGGCAGCATTAGATTATCTTGTTTCCTTGGAGAGCGATATCTTTGTTCCT
ACATATGATGGAAACATGGCCAAAGTTGTTGAAGGACATCGCAGATATCTTGGATACAAG
AAAACTATCTTGTTAGACAGAAAGCATCTGGTGGATTTAATAGACCAACATAATGCTGGA
TCATTGACATGGGATGAGTTCTCTACCGCTGTTAAGGAAGCTCACGCTGAACGTATGGGC
AACCCAACAAAGAGATTGGTCATTCAAGACAGACCTAAAGAGGAGGATTATTTTTACTCC
AACCCATGGGAGTGCTTAGAACCATCTTATGACGATGAACTTTAA