Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400010431
CDS Infomation

pacid=37453071 polypeptide=PGSC0003DMP400007276 locus=PGSC0003DMG400004074 ID=PGSC0003DMT400010431.v4.03 annot-version=v4.03
Sequence

ATGGCAACGGCGGCCTCTAAGGCAGCCGACTCCTACATTGGGAGTCTTATTTGCTTGATC
ACAAAGTCTGATATACGCTATGAAGGATTTCTATTCCATCTTGATGCTGCTGAATCAACA
ATCGGTCTTCGTAACGTGAAATCTTATGGGTCAGAAGGACGAAAGAAGGATGGACCTCAG
ATATCTCCTAGTGACAAAATATACGAGTACATTTTCTTCCGTGGTAGTGATATAAAGGAT
CTGCAGGTTATATCTTCACCATCCCCTCAAAGTACAGCAGTTGTTCCTGATGATCCTGCC
ATAATACAGACTCATTTTCCTAATCCAACACCACCAACCATTGGCATGACATCTCCTGGT
GCTGCACAAGTAGCAGATGTTAGTACCAGTGCACCGTCCATGCTCCCTGTTGCACCTTTC
TTATTGAATCTTCCCCCAAATCCGTTGCTACCAAGTTCTAACCTTTGGGGCTCATCACTT
CCTCCTCCACCTGTAAATATCAGTGGGCCTGCTGTGCCTAATTATTGGCCAGGATTAGTT
GGGTCCTCAGGAGGAATATCTCATTATCAACAGCAACGTTTTCCTCCGCCACCACAAAGT
TTGGTTGCATCCCTTCCCATTCAGCAGCAAGCGCAACACCAAAATGTGAATGCATTAGCC
GGAGGATCTAGTTTGGCTTCACAACATCATCCATTGCTGCTTCCTATTAGTACTACTTCC
CCAAATTTACTTCCTGCCGTGCCGTCTCTATCTGGGCAATCCAATCCCAGGCAGCCTGCT
AAACCGGCTTTTAATTTGTTATCTATTCCAATGCCAAATGATGCATTCCGTACTCTTTCA
ACTGTAGCAGTGGATTCTTGCCCAAGAACTGTGTCTTCTCTGGAAGCGGAACTTAATGCC
AATGCTAATCTGGCTCCAGTGAGGAAAGAATCAAGTTCCGTCATTAGCACTTCAGGTTCT
TTTCCAACATTTTCGCAAACTGTGTCATCTATTGTAGACACAAAAGGTGCATCTCACAGC
AATCTGTCAAGACTATCCCTTTTGACACCAGAGGTACAGTCAGGAGTGAAGGATTCCTCA
TCATGTCGGTCAATGCAAAATCCAAACTGTGATGTATACACTGGTCAAGCATCAGTAGCA
GAACCTCTGCCATCAGGGAGTACTGAGGAAACCCTGGAGTCATTACCAAAATCGCCAACT
AAAATATTACGTGGATCTACATCATCTCATCACAATAGAAGTTATTATGCTCAGGGAAGA
GATGGGGCACATCAAGACACATCATCCACTCATCACAACAGTAGAGGCCCCGCACACAGA
GGAAATGCGCCAAATGGAGGTCCTGTTTATGCACAACAAAGTTACAGGAAACATGCATCA
GGACGAGGAAATGGGCTTATTGGAGCTGCTCTACATTCTCGTCAGAGTAATATGGGCATG
GGCAGAGGAAAAGTGCCAAATGGTATTCCTCAACACAATCATCACAACACAGGAATCCAA
TTTCGTGATGGTGTTCCTCAACACAATCATTGCAACACAGGAATTCAATTTCGGGATGGT
GTTCCTCAACACAATCATCGCAACACAGGAAGTCATTTTCGGGGACGTGGAGCTAAGAAT
CCCCTTGTGGCTAAAAGATTCTCCGAGGATTTCGATTTTGAGGCAATGAACGAAAAATTC
AATAAGAAAGAGGTATGGGATTTTCTAGGCAGAAGTAACAAAGCTGAATCAGATGAAGGA
ATCAGGGATGAGAAAGAGATGGATGAAAGTGATGTTGAGGATGCAACAGGGGATGGAAGT
GCAAAACATGATAACAAGCCTGTCTATTGTAAGGAGGACTTCTTCGATTCTCTTTCTTGC
CACGCACTTGATCGTGAATCTGGGAAAGTGAAGTTCTCCGACCAAAGGAAAAAAGACGTC
GAGACATTTGGTGAGATTCAGAAAAACCAATGGGGTCGTGGTCAGGGAGCTCGCATGTCA
GGGGGATTTCAACAATCTTACCGTGGAAGAGGATATGACAATGCACGTGGTGGCCGTGGC
CAAGGAAGAACTGTTTGGGGTCGTGTCACTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400007276
PEP Infomation

pacid=37453071 transcript=PGSC0003DMT400010431 locus=PGSC0003DMG400004074 ID=PGSC0003DMT400010431.v4.03 annot-version=v4.03
Sequence

MATAASKAADSYIGSLICLITKSDIRYEGFLFHLDAAESTIGLRNVKSYGSEGRKKDGPQ
ISPSDKIYEYIFFRGSDIKDLQVISSPSPQSTAVVPDDPAIIQTHFPNPTPPTIGMTSPG
AAQVADVSTSAPSMLPVAPFLLNLPPNPLLPSSNLWGSSLPPPPVNISGPAVPNYWPGLV
GSSGGISHYQQQRFPPPPQSLVASLPIQQQAQHQNVNALAGGSSLASQHHPLLLPISTTS
PNLLPAVPSLSGQSNPRQPAKPAFNLLSIPMPNDAFRTLSTVAVDSCPRTVSSLEAELNA
NANLAPVRKESSSVISTSGSFPTFSQTVSSIVDTKGASHSNLSRLSLLTPEVQSGVKDSS
SCRSMQNPNCDVYTGQASVAEPLPSGSTEETLESLPKSPTKILRGSTSSHHNRSYYAQGR
DGAHQDTSSTHHNSRGPAHRGNAPNGGPVYAQQSYRKHASGRGNGLIGAALHSRQSNMGM
GRGKVPNGIPQHNHHNTGIQFRDGVPQHNHCNTGIQFRDGVPQHNHRNTGSHFRGRGAKN
PLVAKRFSEDFDFEAMNEKFNKKEVWDFLGRSNKAESDEGIRDEKEMDESDVEDATGDGS
AKHDNKPVYCKEDFFDSLSCHALDRESGKVKFSDQRKKDVETFGEIQKNQWGRGQGARMS
GGFQQSYRGRGYDNARGGRGQGRTVWGRVT*

Transcript Sequence

Transcript ID

PGSC0003DMT400010431
Transcript Infomation

pacid=37453071 locus=PGSC0003DMG400004074 ID=PGSC0003DMT400010431.v4.03 annot-version=v4.03
Sequence

ATGGCAACGGCGGCCTCTAAGGCAGCCGACTCCTACATTGGGAGTCTTATTTGCTTGATC
ACAAAGTCTGATATACGCTATGAAGGATTTCTATTCCATCTTGATGCTGCTGAATCAACA
ATCGGTCTTCGTAACGTGAAATCTTATGGGTCAGAAGGACGAAAGAAGGATGGACCTCAG
ATATCTCCTAGTGACAAAATATACGAGTACATTTTCTTCCGTGGTAGTGATATAAAGGAT
CTGCAGGTTATATCTTCACCATCCCCTCAAAGTACAGCAGTTGTTCCTGATGATCCTGCC
ATAATACAGACTCATTTTCCTAATCCAACACCACCAACCATTGGCATGACATCTCCTGGT
GCTGCACAAGTAGCAGATGTTAGTACCAGTGCACCGTCCATGCTCCCTGTTGCACCTTTC
TTATTGAATCTTCCCCCAAATCCGTTGCTACCAAGTTCTAACCTTTGGGGCTCATCACTT
CCTCCTCCACCTGTAAATATCAGTGGGCCTGCTGTGCCTAATTATTGGCCAGGATTAGTT
GGGTCCTCAGGAGGAATATCTCATTATCAACAGCAACGTTTTCCTCCGCCACCACAAAGT
TTGGTTGCATCCCTTCCCATTCAGCAGCAAGCGCAACACCAAAATGTGAATGCATTAGCC
GGAGGATCTAGTTTGGCTTCACAACATCATCCATTGCTGCTTCCTATTAGTACTACTTCC
CCAAATTTACTTCCTGCCGTGCCGTCTCTATCTGGGCAATCCAATCCCAGGCAGCCTGCT
AAACCGGCTTTTAATTTGTTATCTATTCCAATGCCAAATGATGCATTCCGTACTCTTTCA
ACTGTAGCAGTGGATTCTTGCCCAAGAACTGTGTCTTCTCTGGAAGCGGAACTTAATGCC
AATGCTAATCTGGCTCCAGTGAGGAAAGAATCAAGTTCCGTCATTAGCACTTCAGGTTCT
TTTCCAACATTTTCGCAAACTGTGTCATCTATTGTAGACACAAAAGGTGCATCTCACAGC
AATCTGTCAAGACTATCCCTTTTGACACCAGAGGTACAGTCAGGAGTGAAGGATTCCTCA
TCATGTCGGTCAATGCAAAATCCAAACTGTGATGTATACACTGGTCAAGCATCAGTAGCA
GAACCTCTGCCATCAGGGAGTACTGAGGAAACCCTGGAGTCATTACCAAAATCGCCAACT
AAAATATTACGTGGATCTACATCATCTCATCACAATAGAAGTTATTATGCTCAGGGAAGA
GATGGGGCACATCAAGACACATCATCCACTCATCACAACAGTAGAGGCCCCGCACACAGA
GGAAATGCGCCAAATGGAGGTCCTGTTTATGCACAACAAAGTTACAGGAAACATGCATCA
GGACGAGGAAATGGGCTTATTGGAGCTGCTCTACATTCTCGTCAGAGTAATATGGGCATG
GGCAGAGGAAAAGTGCCAAATGGTATTCCTCAACACAATCATCACAACACAGGAATCCAA
TTTCGTGATGGTGTTCCTCAACACAATCATTGCAACACAGGAATTCAATTTCGGGATGGT
GTTCCTCAACACAATCATCGCAACACAGGAAGTCATTTTCGGGGACGTGGAGCTAAGAAT
CCCCTTGTGGCTAAAAGATTCTCCGAGGATTTCGATTTTGAGGCAATGAACGAAAAATTC
AATAAGAAAGAGGTATGGGATTTTCTAGGCAGAAGTAACAAAGCTGAATCAGATGAAGGA
ATCAGGGATGAGAAAGAGATGGATGAAAGTGATGTTGAGGATGCAACAGGGGATGGAAGT
GCAAAACATGATAACAAGCCTGTCTATTGTAAGGAGGACTTCTTCGATTCTCTTTCTTGC
CACGCACTTGATCGTGAATCTGGGAAAGTGAAGTTCTCCGACCAAAGGAAAAAAGACGTC
GAGACATTTGGTGAGATTCAGAAAAACCAATGGGGTCGTGGTCAGGGAGCTCGCATGTCA
GGGGGATTTCAACAATCTTACCGTGGAAGAGGATATGACAATGCACGTGGTGGCCGTGGC
CAAGGAAGAACTGTTTGGGGTCGTGTCACTTGA