Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400010393
CDS Infomation

pacid=37451748 polypeptide=PGSC0003DMP400007245 locus=PGSC0003DMG400004060 ID=PGSC0003DMT400010393.v4.03 annot-version=v4.03
Sequence

ATGGCGTCCGACGAGGAATATACCGGAGCTCCGGAAATGTATCCAAGCAAACGTGTCAAA
ACCCTAACCCTGGGTTCACCTGAATCTTCCCCGTCCTCATCCGACAAAGGCAAATCGAAG
CTTGAACTTTCGGATTCAGAGACGGAATCGAATTGCTGTGGAATTTGCTTGACTGAAACT
GGACATGGAACAACAATTATCAGAGGTGTTATAGATTGTTGCGACCATTACTTTTGCTTT
GTATGTATCATAGAGTGGTCTAAAGTTGAGTCCAGATGCCCCATGTGTAAACGCCGGTTC
TCCATCATCCGCCGCCCTCCTAGACCTCCCATTTTCCCTTCCGAACGCGTTGTCAATGTT
CCTGTCCGCGATCAGGTTTATCATTGCCATGGAAATGCAACAACTGGACCACGGGATCTG
TATGCAGAAGTGCAATGTAACGTGTGCCACAGCACGGCCGATGACGTTCTCCTGCTGTTG
TGTGACCTTTGTGACACTGCTTATCATACTTATTGTGTTGGCCTTGGTGCTACTGTTCCT
GAGGGCGATTGGTTTTGTGCAGACTGCGCCCTTCTGAAGGCTGAACAGGCCCAGAGTGAG
ATAAAAACTGATTGCTATACCCAAACTAGTTTCAGTGAACCCCAATCAGCAGAATCAGCA
AGACAAGTATCTATATATGATATTGTACGAGAGTCTTATGTTGATGGTGTCGAGAGCGCT
CCAAATGGTGCTTTGGATGCTTCCGAGAGTTCATCTCGTATTGAATCTAGAAGGCAAAGT
ACTTCTCGAAGCAGCTCAATTAGGTTAGGTTATGTAGGAAAAAATGGTGTTGCAGGACGC
GCCACTAAGTTCAATGCCAGAACACTGGGGCATTGCCGCAATGTCCATGATAGGATACGC
ATATTGCGTGAACATTGGAATGGTTTTCAAAGTGGATCCTTGAGGTTTCCTTCTAGCAAA
GTGAGTAATGCTAGTAGTGCTAAACTAAAACCAGTGCGTGGCAGCAGTTCTGGTGAACGG
CCTTTAGTATCTTGCTCGAGTCAACCAAGGACTTCTCAGCCTTCCAATCAAAATAGACCT
GACAGTAAAGGGTCAACAGAGGTGGAGAAGGCGTGGAAAATGATGAATATGGCTAAGGCA
ATAGAACAAAATAGTGTCGGGAACAAAAGTTCTGTTCAGGCCTCAAAACACTCCGTTCAG
AAGAATACTAGCTACAAAGAAGCGAGTGAATCGAGCTCAAGGTCTATCTCACTAAAGATT
GAACAGCATCGACCTACGTATATTCAAAATGTTGGTCCAGGTAGTCATTCCGAGAGTGAT
GTTTGTAAGTTGGACATTAGATCAAAAGGTGCTTCAGGTGTATATAATGGTTCTTCAATG
TCATGCAGACCATTATATAGTGAACTTGTATCTTCGAAGGAGTCTCAGACTTCACTTCAG
CCATATGTCTGTGATGCGAACAATGGACTACCACGGAAGAATAAGTCGTGTGCTGGGTCC
ACACATTTGAGTTCTTCTATCAGGTCGACATCAATTTCTACTACTGTAGGTCATGAGAAA
GAGATCAGTTCTTCCTCGAATAGCATTGTGAATCCTCAGGAGAAACTGAAGGTCGAAAGG
AGTGGCACTAAGAGAAGGGTTGAGGTGAAATCTGATGCTAAGACTGAGATCCAATCTCTT
GTGAAGCTCAACCTGAAAATCCTGTGCAGAGATAAAAAGCTCGAAGCTGACACATTTAAG
CAAGTTGCAAGACTAGCTACTCATTCCATCTTAGCTGCTTGTGGTCTGGAGCACAAAACA
CATGGTATTTCTTCCCTTCCAGAATGCGTGTGTGTCCACAGCGAGGAAGATAAGGAACTC
AGGAGATCTACTCTAATGCCTAAATCGTGCCGAGAATGTTTCTTCTTATTTGTGAAGAAT
GTGGTGAATACTATACTGCTAGACAAGAGATGA

Peptide Sequence

PEP ID

PGSC0003DMP400007245
PEP Infomation

pacid=37451748 transcript=PGSC0003DMT400010393 locus=PGSC0003DMG400004060 ID=PGSC0003DMT400010393.v4.03 annot-version=v4.03
Sequence

MASDEEYTGAPEMYPSKRVKTLTLGSPESSPSSSDKGKSKLELSDSETESNCCGICLTET
GHGTTIIRGVIDCCDHYFCFVCIIEWSKVESRCPMCKRRFSIIRRPPRPPIFPSERVVNV
PVRDQVYHCHGNATTGPRDLYAEVQCNVCHSTADDVLLLLCDLCDTAYHTYCVGLGATVP
EGDWFCADCALLKAEQAQSEIKTDCYTQTSFSEPQSAESARQVSIYDIVRESYVDGVESA
PNGALDASESSSRIESRRQSTSRSSSIRLGYVGKNGVAGRATKFNARTLGHCRNVHDRIR
ILREHWNGFQSGSLRFPSSKVSNASSAKLKPVRGSSSGERPLVSCSSQPRTSQPSNQNRP
DSKGSTEVEKAWKMMNMAKAIEQNSVGNKSSVQASKHSVQKNTSYKEASESSSRSISLKI
EQHRPTYIQNVGPGSHSESDVCKLDIRSKGASGVYNGSSMSCRPLYSELVSSKESQTSLQ
PYVCDANNGLPRKNKSCAGSTHLSSSIRSTSISTTVGHEKEISSSSNSIVNPQEKLKVER
SGTKRRVEVKSDAKTEIQSLVKLNLKILCRDKKLEADTFKQVARLATHSILAACGLEHKT
HGISSLPECVCVHSEEDKELRRSTLMPKSCRECFFLFVKNVVNTILLDKR*

Transcript Sequence

Transcript ID

PGSC0003DMT400010393
Transcript Infomation

pacid=37451748 locus=PGSC0003DMG400004060 ID=PGSC0003DMT400010393.v4.03 annot-version=v4.03
Sequence

ATGGCGTCCGACGAGGAATATACCGGAGCTCCGGAAATGTATCCAAGCAAACGTGTCAAA
ACCCTAACCCTGGGTTCACCTGAATCTTCCCCGTCCTCATCCGACAAAGGCAAATCGAAG
CTTGAACTTTCGGATTCAGAGACGGAATCGAATTGCTGTGGAATTTGCTTGACTGAAACT
GGACATGGAACAACAATTATCAGAGGTGTTATAGATTGTTGCGACCATTACTTTTGCTTT
GTATGTATCATAGAGTGGTCTAAAGTTGAGTCCAGATGCCCCATGTGTAAACGCCGGTTC
TCCATCATCCGCCGCCCTCCTAGACCTCCCATTTTCCCTTCCGAACGCGTTGTCAATGTT
CCTGTCCGCGATCAGGTTTATCATTGCCATGGAAATGCAACAACTGGACCACGGGATCTG
TATGCAGAAGTGCAATGTAACGTGTGCCACAGCACGGCCGATGACGTTCTCCTGCTGTTG
TGTGACCTTTGTGACACTGCTTATCATACTTATTGTGTTGGCCTTGGTGCTACTGTTCCT
GAGGGCGATTGGTTTTGTGCAGACTGCGCCCTTCTGAAGGCTGAACAGGCCCAGAGTGAG
ATAAAAACTGATTGCTATACCCAAACTAGTTTCAGTGAACCCCAATCAGCAGAATCAGCA
AGACAAGTATCTATATATGATATTGTACGAGAGTCTTATGTTGATGGTGTCGAGAGCGCT
CCAAATGGTGCTTTGGATGCTTCCGAGAGTTCATCTCGTATTGAATCTAGAAGGCAAAGT
ACTTCTCGAAGCAGCTCAATTAGGTTAGGTTATGTAGGAAAAAATGGTGTTGCAGGACGC
GCCACTAAGTTCAATGCCAGAACACTGGGGCATTGCCGCAATGTCCATGATAGGATACGC
ATATTGCGTGAACATTGGAATGGTTTTCAAAGTGGATCCTTGAGGTTTCCTTCTAGCAAA
GTGAGTAATGCTAGTAGTGCTAAACTAAAACCAGTGCGTGGCAGCAGTTCTGGTGAACGG
CCTTTAGTATCTTGCTCGAGTCAACCAAGGACTTCTCAGCCTTCCAATCAAAATAGACCT
GACAGTAAAGGGTCAACAGAGGTGGAGAAGGCGTGGAAAATGATGAATATGGCTAAGGCA
ATAGAACAAAATAGTGTCGGGAACAAAAGTTCTGTTCAGGCCTCAAAACACTCCGTTCAG
AAGAATACTAGCTACAAAGAAGCGAGTGAATCGAGCTCAAGGTCTATCTCACTAAAGATT
GAACAGCATCGACCTACGTATATTCAAAATGTTGGTCCAGGTAGTCATTCCGAGAGTGAT
GTTTGTAAGTTGGACATTAGATCAAAAGGTGCTTCAGGTGTATATAATGGTTCTTCAATG
TCATGCAGACCATTATATAGTGAACTTGTATCTTCGAAGGAGTCTCAGACTTCACTTCAG
CCATATGTCTGTGATGCGAACAATGGACTACCACGGAAGAATAAGTCGTGTGCTGGGTCC
ACACATTTGAGTTCTTCTATCAGGTCGACATCAATTTCTACTACTGTAGGTCATGAGAAA
GAGATCAGTTCTTCCTCGAATAGCATTGTGAATCCTCAGGAGAAACTGAAGGTCGAAAGG
AGTGGCACTAAGAGAAGGGTTGAGGTGAAATCTGATGCTAAGACTGAGATCCAATCTCTT
GTGAAGCTCAACCTGAAAATCCTGTGCAGAGATAAAAAGCTCGAAGCTGACACATTTAAG
CAAGTTGCAAGACTAGCTACTCATTCCATCTTAGCTGCTTGTGGTCTGGAGCACAAAACA
CATGGTATTTCTTCCCTTCCAGAATGCGTGTGTGTCCACAGCGAGGAAGATAAGGAACTC
AGGAGATCTACTCTAATGCCTAAATCGTGCCGAGAATGTTTCTTCTTATTTGTGAAGAAT
GTGGTGAATACTATACTGCTAGACAAGAGATGA