Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400010353
CDS Infomation

pacid=37428386 polypeptide=PGSC0003DMP400007217 locus=PGSC0003DMG400004042 ID=PGSC0003DMT400010353.v4.03 annot-version=v4.03
Sequence

ATGTGGCACGAAGCTCGGAGGTCGGAGAAGAAAGTCCACGATATGATGGACGCTGCTCGT
AAGAGAGCTCAAAGACGGGCCATCTATCTCGCTAAACGCCGTGGCGATCCTCAGCAATCC
ATTCAAGCCATCGGCTCTCGCTGTCGTATCTACCGCGACGACGCTCTTTATCAAGCCACC
GAGGATCAGCAGGGCATGATACCTTGGAATGGGAAACAAGACATTTTGATCGACAGATTT
GATGGTCGTGCTCTTCTTGATTTTATTCGTGATGCTAGTTCCCGACATCGTCGGGTCCCA
GAAAGAACAGAGGAAGAGGAAGAACTAGAAGAGTTTGTTAATTTTCAGCGTTATCGGGAT
TTAATTAAGCATCGGCGTAGAGGATTTAAAGATGAAGAGGGTATGCAACATGTTAATCAG
GAGATGGAGGCTAAGACCACTGCACTTCTTGGCTCTGACAGACCTCAGCTTTCTCAGCCT
CCAGTGTGCAAGGGGTCGTATTCACAAGTGGGTTTCTCATATGATGGAGAGGGGAAAGAT
GAAGCTCACTTTTCAGATGGTGAAGAAGAAGATGAAGATGACGATGATGATGAGGAAGAA
GAAGATTTTAACAGTGATGATAGCAACGATGAAGTGATGGAGTCAATTGCCAAAGATTAT
GGTGTGAAAAGGTATGGATGGCTTGTCTACATGGACAAAAAGGCCAAGGAGGAAGAAAGG
AGGCAAAGAGAAGTTATCAAGGGAGATCCTGCAATAAGGAAGCTGAGTCGCAAAGAGAGA
AGAAAGGCTTCTCAACTAGAAAGGGAGAGGGAAAGAGAAGCTGCCCGTATTACCGGGAGT
AGAGTTCTCCATCATGATCCCTATCGTGAATCTCGACGAAGTCCGACATATGAAGCTTAT
TCACGTTCCAGAAGATCCAGGTCAAGGTCTCTCTCATACTCCCCTCCCCATTCAAGGCGC
TACGAACGTGGAGGAAAATCTGATGATATTTACCAAGGCAAAGAGAGAACGCCGAAGATA
GAGTATATTACTGAATTTGGTGGCGCAGTTGATGAGAACAAGCCTAAAGTTGAAGGATAT
TCTCCACCACCATCTCCTCCACCTCGAACTGATCCATTAAGCCGGCCATCAACTGGTCGT
ATTCTTGAGGCCCTCCATGTAGATCCTGCATCTGGGGTATCTATTGATAAGGATAAGAGT
GGCCAAATGTTGAAAACACCAACAAGTGCGTCCTCAGCACTATCAAAGTTAAACAAGACA
ACTAGTAGTTCAAGCCTCTCTAAACAGCAGGGTGAAAAGAAGGAAACACCTCAGGAGAGA
CTTAAGCGGATTATGAGCAAACAATTGAACAAACAAATCAAGAAAGATACAGCTATTGAA
ACTGCCAAGAAAAGAGAACAAGAGAAACAGAGGCTTGAAAAGCTGGCAGAGACAAGCCTA
GTAAGCCGGTATCGTCGCCGAAGCCGTAGTAGAAGTTACAGCCGTTCCCCTCGAAGGCAT
CGACGTAGCCGGAGTCCCAGCAGAGAAAGGAGTTCTCGTAGATATCGCTCACGTTCAAGG
TCTGGCTCACAGTCGCGCACTCGCTCTTGCTCACATTCGCCTTCGCATTCTCACTCTAGT
TCACGCTCTCTTTCCCGTTCCATTTCCCGGTCTCGTTCACCTCGTAGGAGACGATCAAGA
TACTGA

Peptide Sequence

PEP ID

PGSC0003DMP400007217
PEP Infomation

pacid=37428386 transcript=PGSC0003DMT400010353 locus=PGSC0003DMG400004042 ID=PGSC0003DMT400010353.v4.03 annot-version=v4.03
Sequence

MWHEARRSEKKVHDMMDAARKRAQRRAIYLAKRRGDPQQSIQAIGSRCRIYRDDALYQAT
EDQQGMIPWNGKQDILIDRFDGRALLDFIRDASSRHRRVPERTEEEEELEEFVNFQRYRD
LIKHRRRGFKDEEGMQHVNQEMEAKTTALLGSDRPQLSQPPVCKGSYSQVGFSYDGEGKD
EAHFSDGEEEDEDDDDDEEEEDFNSDDSNDEVMESIAKDYGVKRYGWLVYMDKKAKEEER
RQREVIKGDPAIRKLSRKERRKASQLEREREREAARITGSRVLHHDPYRESRRSPTYEAY
SRSRRSRSRSLSYSPPHSRRYERGGKSDDIYQGKERTPKIEYITEFGGAVDENKPKVEGY
SPPPSPPPRTDPLSRPSTGRILEALHVDPASGVSIDKDKSGQMLKTPTSASSALSKLNKT
TSSSSLSKQQGEKKETPQERLKRIMSKQLNKQIKKDTAIETAKKREQEKQRLEKLAETSL
VSRYRRRSRSRSYSRSPRRHRRSRSPSRERSSRRYRSRSRSGSQSRTRSCSHSPSHSHSS
SRSLSRSISRSRSPRRRRSRY*

Transcript Sequence

Transcript ID

PGSC0003DMT400010353
Transcript Infomation

pacid=37428386 locus=PGSC0003DMG400004042 ID=PGSC0003DMT400010353.v4.03 annot-version=v4.03
Sequence

ATGTGGCACGAAGCTCGGAGGTCGGAGAAGAAAGTCCACGATATGATGGACGCTGCTCGT
AAGAGAGCTCAAAGACGGGCCATCTATCTCGCTAAACGCCGTGGCGATCCTCAGCAATCC
ATTCAAGCCATCGGCTCTCGCTGTCGTATCTACCGCGACGACGCTCTTTATCAAGCCACC
GAGGATCAGCAGGGCATGATACCTTGGAATGGGAAACAAGACATTTTGATCGACAGATTT
GATGGTCGTGCTCTTCTTGATTTTATTCGTGATGCTAGTTCCCGACATCGTCGGGTCCCA
GAAAGAACAGAGGAAGAGGAAGAACTAGAAGAGTTTGTTAATTTTCAGCGTTATCGGGAT
TTAATTAAGCATCGGCGTAGAGGATTTAAAGATGAAGAGGGTATGCAACATGTTAATCAG
GAGATGGAGGCTAAGACCACTGCACTTCTTGGCTCTGACAGACCTCAGCTTTCTCAGCCT
CCAGTGTGCAAGGGGTCGTATTCACAAGTGGGTTTCTCATATGATGGAGAGGGGAAAGAT
GAAGCTCACTTTTCAGATGGTGAAGAAGAAGATGAAGATGACGATGATGATGAGGAAGAA
GAAGATTTTAACAGTGATGATAGCAACGATGAAGTGATGGAGTCAATTGCCAAAGATTAT
GGTGTGAAAAGGTATGGATGGCTTGTCTACATGGACAAAAAGGCCAAGGAGGAAGAAAGG
AGGCAAAGAGAAGTTATCAAGGGAGATCCTGCAATAAGGAAGCTGAGTCGCAAAGAGAGA
AGAAAGGCTTCTCAACTAGAAAGGGAGAGGGAAAGAGAAGCTGCCCGTATTACCGGGAGT
AGAGTTCTCCATCATGATCCCTATCGTGAATCTCGACGAAGTCCGACATATGAAGCTTAT
TCACGTTCCAGAAGATCCAGGTCAAGGTCTCTCTCATACTCCCCTCCCCATTCAAGGCGC
TACGAACGTGGAGGAAAATCTGATGATATTTACCAAGGCAAAGAGAGAACGCCGAAGATA
GAGTATATTACTGAATTTGGTGGCGCAGTTGATGAGAACAAGCCTAAAGTTGAAGGATAT
TCTCCACCACCATCTCCTCCACCTCGAACTGATCCATTAAGCCGGCCATCAACTGGTCGT
ATTCTTGAGGCCCTCCATGTAGATCCTGCATCTGGGGTATCTATTGATAAGGATAAGAGT
GGCCAAATGTTGAAAACACCAACAAGTGCGTCCTCAGCACTATCAAAGTTAAACAAGACA
ACTAGTAGTTCAAGCCTCTCTAAACAGCAGGGTGAAAAGAAGGAAACACCTCAGGAGAGA
CTTAAGCGGATTATGAGCAAACAATTGAACAAACAAATCAAGAAAGATACAGCTATTGAA
ACTGCCAAGAAAAGAGAACAAGAGAAACAGAGGCTTGAAAAGCTGGCAGAGACAAGCCTA
GTAAGCCGGTATCGTCGCCGAAGCCGTAGTAGAAGTTACAGCCGTTCCCCTCGAAGGCAT
CGACGTAGCCGGAGTCCCAGCAGAGAAAGGAGTTCTCGTAGATATCGCTCACGTTCAAGG
TCTGGCTCACAGTCGCGCACTCGCTCTTGCTCACATTCGCCTTCGCATTCTCACTCTAGT
TCACGCTCTCTTTCCCGTTCCATTTCCCGGTCTCGTTCACCTCGTAGGAGACGATCAAGA
TACTGA