Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400010348
CDS Infomation

pacid=37425500 polypeptide=PGSC0003DMP400007212 locus=PGSC0003DMG400004041 ID=PGSC0003DMT400010348.v4.03 annot-version=v4.03
Sequence

ATGGTCGACGTAGACCGGAGGATGACCGGGCTGAATCCGGCTCACTTAGCCGGACTCCGC
CGTCTATCCGCAAGAGCCGCCGCTTCTTCTCCGTCAACTCCGGTGCCTCCTCGGAATAGT
CTCCTTTCCTTCTCCTCCCTTGCTGATAAAGTTATATCTCATCTCAAGAGCTCTGGTATT
CAGGTTCAGGCCGGGTTGTCGGATGTGGAGTTCGCTAGAGCTGAAGCAGAGTTTGGGTTT
GCTTTTCCACCTGACTTAAAAGCTGTTCTCTCCGCCGGTTTACCCATCGGACCCGGTTTT
CCTGACTGGCGCTCTACTGGTCCGGCTCGGTTCCAGCTTCGTGCTTCGATTGACTTACCC
ATCGCTGCAATTTCATTCCATATAGCTCGTAATGCTTTGTGGTCTAAGTCTTGGGGTCCT
AGGCCATGTGACCCAGAAAAGGCAATTAAAATAGCCAGAAATGCTCTCAAAAGAGCTCCA
CTTCTGATACCCATTTTCAACCATTGTTACATTCCTTGTAATCCTTGTTTAGCTGGTAAC
CCAATTTTCTACGTGGACGAAAATCGGATTTTCTGCTGCGGATTTGATCTATCCGACTTC
TTTGATCGTGAATCATCTTTGTTCCAAAGTTCAGATCCTCAGATTCTTTCAAAACAACGC
TCTTTAAGCGAAAAATCAGCTGGTTCATCATCCACTTTCTCAAGGAGGAGCCTCGATACA
CTCTCCGGTGGTCGGACGCCGCGTTGGGTGGAGTTCTGGAGCGATGCTGCCGTAGATCGA
AGGCGGAGGAACTCAAATTCGTCATCGTCATGTTCAACCTCACCGGAAAGGTACTTTGAA
ATGCCCAAGTCCAAAATGCCTAATTGGGTCGACGAGTACGTAGATAATATCGGGTCGGTT
TTGAAAGAAGGCGGGTGGGCTGAATCGGATGTGAAGGAAATTGTACAAGTTACAGCTTCT
GGATTCTTCGAAGGTGAAATGATATTGTTGGATAATCAAGCGGTTATGGATGCTCTTCTT
GTGAAAGCGGATCGGTTCTCTGATTCGCTCCGTAAGGCCGGGTGGAGCTCCGAAGAAGTT
TCTTATGCACTGGGTTTTGATTATCGACCGGAGAAGGAAAAGAAACCGGCTAAGAAGCTT
TCACCGGAGTTAGCGGAAAGAATCGGGAAATTGGCTGAGTCGGTAACCCGTTCACGGTCA
TCATCATAG

Peptide Sequence

PEP ID

PGSC0003DMP400007212
PEP Infomation

pacid=37425500 transcript=PGSC0003DMT400010348 locus=PGSC0003DMG400004041 ID=PGSC0003DMT400010348.v4.03 annot-version=v4.03
Sequence

MVDVDRRMTGLNPAHLAGLRRLSARAAASSPSTPVPPRNSLLSFSSLADKVISHLKSSGI
QVQAGLSDVEFARAEAEFGFAFPPDLKAVLSAGLPIGPGFPDWRSTGPARFQLRASIDLP
IAAISFHIARNALWSKSWGPRPCDPEKAIKIARNALKRAPLLIPIFNHCYIPCNPCLAGN
PIFYVDENRIFCCGFDLSDFFDRESSLFQSSDPQILSKQRSLSEKSAGSSSTFSRRSLDT
LSGGRTPRWVEFWSDAAVDRRRRNSNSSSSCSTSPERYFEMPKSKMPNWVDEYVDNIGSV
LKEGGWAESDVKEIVQVTASGFFEGEMILLDNQAVMDALLVKADRFSDSLRKAGWSSEEV
SYALGFDYRPEKEKKPAKKLSPELAERIGKLAESVTRSRSSS*

Transcript Sequence

Transcript ID

PGSC0003DMT400010348
Transcript Infomation

pacid=37425500 locus=PGSC0003DMG400004041 ID=PGSC0003DMT400010348.v4.03 annot-version=v4.03
Sequence

ATGGTCGACGTAGACCGGAGGATGACCGGGCTGAATCCGGCTCACTTAGCCGGACTCCGC
CGTCTATCCGCAAGAGCCGCCGCTTCTTCTCCGTCAACTCCGGTGCCTCCTCGGAATAGT
CTCCTTTCCTTCTCCTCCCTTGCTGATAAAGTTATATCTCATCTCAAGAGCTCTGGTATT
CAGGTTCAGGCCGGGTTGTCGGATGTGGAGTTCGCTAGAGCTGAAGCAGAGTTTGGGTTT
GCTTTTCCACCTGACTTAAAAGCTGTTCTCTCCGCCGGTTTACCCATCGGACCCGGTTTT
CCTGACTGGCGCTCTACTGGTCCGGCTCGGTTCCAGCTTCGTGCTTCGATTGACTTACCC
ATCGCTGCAATTTCATTCCATATAGCTCGTAATGCTTTGTGGTCTAAGTCTTGGGGTCCT
AGGCCATGTGACCCAGAAAAGGCAATTAAAATAGCCAGAAATGCTCTCAAAAGAGCTCCA
CTTCTGATACCCATTTTCAACCATTGTTACATTCCTTGTAATCCTTGTTTAGCTGGTAAC
CCAATTTTCTACGTGGACGAAAATCGGATTTTCTGCTGCGGATTTGATCTATCCGACTTC
TTTGATCGTGAATCATCTTTGTTCCAAAGTTCAGATCCTCAGATTCTTTCAAAACAACGC
TCTTTAAGCGAAAAATCAGCTGGTTCATCATCCACTTTCTCAAGGAGGAGCCTCGATACA
CTCTCCGGTGGTCGGACGCCGCGTTGGGTGGAGTTCTGGAGCGATGCTGCCGTAGATCGA
AGGCGGAGGAACTCAAATTCGTCATCGTCATGTTCAACCTCACCGGAAAGGTACTTTGAA
ATGCCCAAGTCCAAAATGCCTAATTGGGTCGACGAGTACGTAGATAATATCGGGTCGGTT
TTGAAAGAAGGCGGGTGGGCTGAATCGGATGTGAAGGAAATTGTACAAGTTACAGCTTCT
GGATTCTTCGAAGGTGAAATGATATTGTTGGATAATCAAGCGGTTATGGATGCTCTTCTT
GTGAAAGCGGATCGGTTCTCTGATTCGCTCCGTAAGGCCGGGTGGAGCTCCGAAGAAGTT
TCTTATGCACTGGGTTTTGATTATCGACCGGAGAAGGAAAAGAAACCGGCTAAGAAGCTT
TCACCGGAGTTAGCGGAAAGAATCGGGAAATTGGCTGAGTCGGTAACCCGTTCACGGTCA
TCATCATAG