Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400010292
CDS Infomation

pacid=37426227 polypeptide=PGSC0003DMP400007174 locus=PGSC0003DMG400004021 ID=PGSC0003DMT400010292.v4.03 annot-version=v4.03
Sequence

ATGGCGGACGAAGCGGAAGACGCTATATTGGCATATCTCAAAGACAACGATGAGATTTCA
AATTCTGCGAAATTTGCTCAAGATTTTGGTTTTGGCCATGACGAGATCGTCAATGTCATA
CGCAGACTCCATGGATTTCGATTTGTGGATGCTCAGGACATTAGGAGAGAGAGATGGGTG
CTTACTGAAGAGGGGAAAACTTATGCTGCTGTAGGTTCTCCAGAATTTCAGCTTTTCTCA
ACAGTACCACCGGAGGGAATTGCGCGGGAAGAGTTGCAGAAAAAATTGGATCCTGCAGTT
TATAAAATTGGTTGCCAGCAAGCTATAAAGAACAAGTGGGTGGAGATGGCAAAGACACAT
GTCTCAAGGAAGGTCCAACATGCTGATGACATAGTTAAAAATTTGCTGTTGCGGATACAA
AATGATGAGGCTGTCAATCAGGAGGATATTGATGCTCTAAAGCGAAGAAAACTAATAATT
CAGCAGGTTTGGAAAGGAAATTCCGTAAGAAAAGGTCCCGAATATGCCCCAAAAAGGAAA
AGACCAGCGACTGATCTCACTCGGGAAAATTTACAGAGGGGTGACTGGAAGGAATTGGAA
TTTAAAGAGTACAACTTCAGTGCTAAAGGTCAGCCAGTTGAAGGAGGCCATCTTCATCCA
TTGCTCAAGGTTAGGCGGCAGGTACAAACGATTTTTCTTAATATGGGGTTTGAGGAGATG
CCAACAAATAATTATGTCGAAAGCAGTTTTTGGAACTTCGATGCACTTTTCCAGCCCCAA
CAGCACCCTGCCCGTGATTCACATGATACTTTCTTTTTGAAAGTGCCTTCCTCTACAAAG
ATGCTGCCAGAAGATTATGTTGAGCGGGTAAAAGAAATTCATGAATCTGGTGGTTACCAA
TCTAGGGGATATGGGTATGATTGGAAAAGAGAGGAAGCGAACAAGAATCTTTTGCGGACA
CACACTACTGCTGTTTCGTCAAGAATGTTGTATGCATTAGCTCAGAAGCCATTCGCCCCC
AAGAAATACTATTCTATTGATCGTGTTTTCAGAAATGAAGCAGTTGATCGGACACATCTT
GCTGAATTTCATCAGATAGAAGGTTTAATATGTGATCGTGGACTTACTCTTGGTGACCTA
ATTGGTGTTCTTCATGACTTCTTTTCTCGTCTAGGAATGTCCAAGCTTCGGTTCAAACCT
GCTTATAATCCTTATACTGAGCCCAGCATGGAAATTTTCAGCTACCATGAAGGCTTTAAG
AAATGGGTGGAAGTTGGAAATTCTGGTATGTTTAGGCCTGAAATGCTTCTTCCTATGGGT
CTGCCAGAAGATGTTCGGGTTATTGCCTGGGGCCTTTCCCTTGAGAGGCCCACCATGATT
CTCTACGGAATTGACAACATCAGAGATCTTTTTGGTCCCAAGGTGGATCTAGGTCTCATC
AAAAGAAATCCAATATGCCGGCTTGGACTTTAG

Peptide Sequence

PEP ID

PGSC0003DMP400007174
PEP Infomation

pacid=37426227 transcript=PGSC0003DMT400010292 locus=PGSC0003DMG400004021 ID=PGSC0003DMT400010292.v4.03 annot-version=v4.03
Sequence

MADEAEDAILAYLKDNDEISNSAKFAQDFGFGHDEIVNVIRRLHGFRFVDAQDIRRERWV
LTEEGKTYAAVGSPEFQLFSTVPPEGIAREELQKKLDPAVYKIGCQQAIKNKWVEMAKTH
VSRKVQHADDIVKNLLLRIQNDEAVNQEDIDALKRRKLIIQQVWKGNSVRKGPEYAPKRK
RPATDLTRENLQRGDWKELEFKEYNFSAKGQPVEGGHLHPLLKVRRQVQTIFLNMGFEEM
PTNNYVESSFWNFDALFQPQQHPARDSHDTFFLKVPSSTKMLPEDYVERVKEIHESGGYQ
SRGYGYDWKREEANKNLLRTHTTAVSSRMLYALAQKPFAPKKYYSIDRVFRNEAVDRTHL
AEFHQIEGLICDRGLTLGDLIGVLHDFFSRLGMSKLRFKPAYNPYTEPSMEIFSYHEGFK
KWVEVGNSGMFRPEMLLPMGLPEDVRVIAWGLSLERPTMILYGIDNIRDLFGPKVDLGLI
KRNPICRLGL*

Transcript Sequence

Transcript ID

PGSC0003DMT400010292
Transcript Infomation

pacid=37426227 locus=PGSC0003DMG400004021 ID=PGSC0003DMT400010292.v4.03 annot-version=v4.03
Sequence

ATGGCGGACGAAGCGGAAGACGCTATATTGGCATATCTCAAAGACAACGATGAGATTTCA
AATTCTGCGAAATTTGCTCAAGATTTTGGTTTTGGCCATGACGAGATCGTCAATGTCATA
CGCAGACTCCATGGATTTCGATTTGTGGATGCTCAGGACATTAGGAGAGAGAGATGGGTG
CTTACTGAAGAGGGGAAAACTTATGCTGCTGTAGGTTCTCCAGAATTTCAGCTTTTCTCA
ACAGTACCACCGGAGGGAATTGCGCGGGAAGAGTTGCAGAAAAAATTGGATCCTGCAGTT
TATAAAATTGGTTGCCAGCAAGCTATAAAGAACAAGTGGGTGGAGATGGCAAAGACACAT
GTCTCAAGGAAGGTCCAACATGCTGATGACATAGTTAAAAATTTGCTGTTGCGGATACAA
AATGATGAGGCTGTCAATCAGGAGGATATTGATGCTCTAAAGCGAAGAAAACTAATAATT
CAGCAGGTTTGGAAAGGAAATTCCGTAAGAAAAGGTCCCGAATATGCCCCAAAAAGGAAA
AGACCAGCGACTGATCTCACTCGGGAAAATTTACAGAGGGGTGACTGGAAGGAATTGGAA
TTTAAAGAGTACAACTTCAGTGCTAAAGGTCAGCCAGTTGAAGGAGGCCATCTTCATCCA
TTGCTCAAGGTTAGGCGGCAGGTACAAACGATTTTTCTTAATATGGGGTTTGAGGAGATG
CCAACAAATAATTATGTCGAAAGCAGTTTTTGGAACTTCGATGCACTTTTCCAGCCCCAA
CAGCACCCTGCCCGTGATTCACATGATACTTTCTTTTTGAAAGTGCCTTCCTCTACAAAG
ATGCTGCCAGAAGATTATGTTGAGCGGGTAAAAGAAATTCATGAATCTGGTGGTTACCAA
TCTAGGGGATATGGGTATGATTGGAAAAGAGAGGAAGCGAACAAGAATCTTTTGCGGACA
CACACTACTGCTGTTTCGTCAAGAATGTTGTATGCATTAGCTCAGAAGCCATTCGCCCCC
AAGAAATACTATTCTATTGATCGTGTTTTCAGAAATGAAGCAGTTGATCGGACACATCTT
GCTGAATTTCATCAGATAGAAGGTTTAATATGTGATCGTGGACTTACTCTTGGTGACCTA
ATTGGTGTTCTTCATGACTTCTTTTCTCGTCTAGGAATGTCCAAGCTTCGGTTCAAACCT
GCTTATAATCCTTATACTGAGCCCAGCATGGAAATTTTCAGCTACCATGAAGGCTTTAAG
AAATGGGTGGAAGTTGGAAATTCTGGTATGTTTAGGCCTGAAATGCTTCTTCCTATGGGT
CTGCCAGAAGATGTTCGGGTTATTGCCTGGGGCCTTTCCCTTGAGAGGCCCACCATGATT
CTCTACGGAATTGACAACATCAGAGATCTTTTTGGTCCCAAGGTGGATCTAGGTCTCATC
AAAAGAAATCCAATATGCCGGCTTGGACTTTAG