Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400010287
CDS Infomation

pacid=37424660 polypeptide=PGSC0003DMP400007171 locus=PGSC0003DMG400004020 ID=PGSC0003DMT400010287.v4.03 annot-version=v4.03
Sequence

ATGTATTCAACTGTGTTTTACACTTCAGTTCATCCTTCCACTTCAATTTTATCAAGAAAG
CAGCTACCTTTATTGATTTCCAAGGACTTCCCTACAGAGTTATATCATTCTTTACCTTGT
AGGAGCTTGGAAAATGGGCATATCAAGAAGGTTAAAGGAGTAAAAGTAAAAGCCACAATA
ACTGAAGCTCCGGTTACTCCTACAGAGAAGAGTGACTCTGGGGTTAACGGTGATTTGAAG
GTTCCACAGAAGAAGTTGAAAGTACTTGTTGCGGGTGGTGGGATTGGAGGGTTAGTTTTT
GCTTTAGCAGCAAAGAAAAAGGGGTTTGATGTGTTGGTGTTTGAGAGGGATTTAAGTGCT
ATCAGAGGAGAGGGACAATATAGAGGTCCAATTCAGATACAGAGCAATGCATTGGCTGCT
TTGGAAGCAATTGATATGGATGTTGCTGAAGACATCATGAATGCTGGCTGCATCACTGGT
CAAAGGATTAATGGCTTGGTTGATGGTATTTCTGGCAACTGGTATTGCAAGTTTGATACG
TTCACTCCAGCAGTGGAACGTGGACTTCCCGTGACAAGAGTCATCAGCCGCATGACTTTG
CAGCAGATCCTTGCACGTGCTGTTGGGGAGGATACAATTATGAATGAAAGTAATGTTGTA
GACTTTGAGGATGATGGGGAGAAGGTTAGTGTGGTTCTTGAGAATGGACAACGATTTACA
GGTGATCTTCTGGTTGGTGCTGATGGCATAAGGTCTAAGGTACGGACTAATTTGTTTGGA
CCCAGTGAAGTTACTTACTCTGGCTACACTTGTTATACTGGAATTGCAGATTTTGTTCCT
GCTGATATTGATACAGTTGGGTACCGAGTCTTTTTGGGCCACAAACAGTACTTTGTTTCT
TCAGATGTGGGGGGAGGCAAGATGCAGTGGTATGCATTTTACAATGAACCAGCTGGTGGT
GTGGATGCTCCAAATGGTAAAAAGGAAAGATTGCTTAAAATATTTGGGGGATGGTGTGAC
AATGTCATAGACCTATTAGTTGCCACAGATGAAGATGCAATTCTTCGTCGTGACATCTAT
GATAGACCACCAACTTTTAGTTGGGGAAGAGGTCATGTTACATTGCTTGGGGACTCTGTC
CATGCTATGCAGCCTAATTTGGGTCAAGGGGGATGCATGGCCATAGAGGATAGCTATCAA
CTAGCACTGGAACTTGACAAAGCATGTAGTCGAAGTGCCGAGTCAGGAAGCCCTGTGGAT
ATCATCTCATCTTTAAGGAGCTATGAAAGTGCTAGAAAACTTCGAGTTGGAGTCATCCAT
GGACTGGCTAGAATGGCTGCAATCATGGCATCTACTTACAAAGCTTATCTTGGCGTCGGA
CTTGGTCCACTATCATTTTTGACGCAGTATAGAATACCACATCCTGGAAGAGTTGGTGGA
AGAGTATTTATTGACTTGGGAATGCCTCTGATGTTAAGTTGGGTTCTAGGAGGCAATGGG
GACAAGCTTGAAGGCAGAATAAAACATTGCAGGCTATCTGAGAAAGCAAATGACCAATTG
AGAAAATGGTTTGAAGATGATGATGCATTAGAGCGTGCTACTGATGCAGAGTGGTTACTT
TTACCTGCGGGGAATGGCACTTCTGGTTTAGAAGCTATTGTTTTAAGCAGAGATGAGGAT
GTCCCTTGCACTATCGGGTCTGTCTCACATACAAACATTCCTGGAAAATCAGTAGTTTTA
CCTTTGCCACAGGTGTCTGAAATGCACGCCCGAATATCCTGCAAAGACGGAGCATTTTTT
GTAACTGATTTACAAAGCGAACATGGCACCTGGGTTACAGATAATGAAGGCAGAAGATAC
CGGACGTCTCCAAACTTCCCTACACGTTTTCATCCATCAGATGTTATCGAATTTGGTTCT
GATAAGGCAGCATTTCGTGTAAAGGCAATGAAATTTCCTCCAAAAACTACTGAAAGGAAG
GAAGAGCGTGAAGCTGTGGGGGCAGCGTAA

Peptide Sequence

PEP ID

PGSC0003DMP400007171
PEP Infomation

pacid=37424660 transcript=PGSC0003DMT400010287 locus=PGSC0003DMG400004020 ID=PGSC0003DMT400010287.v4.03 annot-version=v4.03
Sequence

MYSTVFYTSVHPSTSILSRKQLPLLISKDFPTELYHSLPCRSLENGHIKKVKGVKVKATI
TEAPVTPTEKSDSGVNGDLKVPQKKLKVLVAGGGIGGLVFALAAKKKGFDVLVFERDLSA
IRGEGQYRGPIQIQSNALAALEAIDMDVAEDIMNAGCITGQRINGLVDGISGNWYCKFDT
FTPAVERGLPVTRVISRMTLQQILARAVGEDTIMNESNVVDFEDDGEKVSVVLENGQRFT
GDLLVGADGIRSKVRTNLFGPSEVTYSGYTCYTGIADFVPADIDTVGYRVFLGHKQYFVS
SDVGGGKMQWYAFYNEPAGGVDAPNGKKERLLKIFGGWCDNVIDLLVATDEDAILRRDIY
DRPPTFSWGRGHVTLLGDSVHAMQPNLGQGGCMAIEDSYQLALELDKACSRSAESGSPVD
IISSLRSYESARKLRVGVIHGLARMAAIMASTYKAYLGVGLGPLSFLTQYRIPHPGRVGG
RVFIDLGMPLMLSWVLGGNGDKLEGRIKHCRLSEKANDQLRKWFEDDDALERATDAEWLL
LPAGNGTSGLEAIVLSRDEDVPCTIGSVSHTNIPGKSVVLPLPQVSEMHARISCKDGAFF
VTDLQSEHGTWVTDNEGRRYRTSPNFPTRFHPSDVIEFGSDKAAFRVKAMKFPPKTTERK
EEREAVGAA*

Transcript Sequence

Transcript ID

PGSC0003DMT400010287
Transcript Infomation

pacid=37424660 locus=PGSC0003DMG400004020 ID=PGSC0003DMT400010287.v4.03 annot-version=v4.03
Sequence

ATGTATTCAACTGTGTTTTACACTTCAGTTCATCCTTCCACTTCAATTTTATCAAGAAAG
CAGCTACCTTTATTGATTTCCAAGGACTTCCCTACAGAGTTATATCATTCTTTACCTTGT
AGGAGCTTGGAAAATGGGCATATCAAGAAGGTTAAAGGAGTAAAAGTAAAAGCCACAATA
ACTGAAGCTCCGGTTACTCCTACAGAGAAGAGTGACTCTGGGGTTAACGGTGATTTGAAG
GTTCCACAGAAGAAGTTGAAAGTACTTGTTGCGGGTGGTGGGATTGGAGGGTTAGTTTTT
GCTTTAGCAGCAAAGAAAAAGGGGTTTGATGTGTTGGTGTTTGAGAGGGATTTAAGTGCT
ATCAGAGGAGAGGGACAATATAGAGGTCCAATTCAGATACAGAGCAATGCATTGGCTGCT
TTGGAAGCAATTGATATGGATGTTGCTGAAGACATCATGAATGCTGGCTGCATCACTGGT
CAAAGGATTAATGGCTTGGTTGATGGTATTTCTGGCAACTGGTATTGCAAGTTTGATACG
TTCACTCCAGCAGTGGAACGTGGACTTCCCGTGACAAGAGTCATCAGCCGCATGACTTTG
CAGCAGATCCTTGCACGTGCTGTTGGGGAGGATACAATTATGAATGAAAGTAATGTTGTA
GACTTTGAGGATGATGGGGAGAAGGTTAGTGTGGTTCTTGAGAATGGACAACGATTTACA
GGTGATCTTCTGGTTGGTGCTGATGGCATAAGGTCTAAGGTACGGACTAATTTGTTTGGA
CCCAGTGAAGTTACTTACTCTGGCTACACTTGTTATACTGGAATTGCAGATTTTGTTCCT
GCTGATATTGATACAGTTGGGTACCGAGTCTTTTTGGGCCACAAACAGTACTTTGTTTCT
TCAGATGTGGGGGGAGGCAAGATGCAGTGGTATGCATTTTACAATGAACCAGCTGGTGGT
GTGGATGCTCCAAATGGTAAAAAGGAAAGATTGCTTAAAATATTTGGGGGATGGTGTGAC
AATGTCATAGACCTATTAGTTGCCACAGATGAAGATGCAATTCTTCGTCGTGACATCTAT
GATAGACCACCAACTTTTAGTTGGGGAAGAGGTCATGTTACATTGCTTGGGGACTCTGTC
CATGCTATGCAGCCTAATTTGGGTCAAGGGGGATGCATGGCCATAGAGGATAGCTATCAA
CTAGCACTGGAACTTGACAAAGCATGTAGTCGAAGTGCCGAGTCAGGAAGCCCTGTGGAT
ATCATCTCATCTTTAAGGAGCTATGAAAGTGCTAGAAAACTTCGAGTTGGAGTCATCCAT
GGACTGGCTAGAATGGCTGCAATCATGGCATCTACTTACAAAGCTTATCTTGGCGTCGGA
CTTGGTCCACTATCATTTTTGACGCAGTATAGAATACCACATCCTGGAAGAGTTGGTGGA
AGAGTATTTATTGACTTGGGAATGCCTCTGATGTTAAGTTGGGTTCTAGGAGGCAATGGG
GACAAGCTTGAAGGCAGAATAAAACATTGCAGGCTATCTGAGAAAGCAAATGACCAATTG
AGAAAATGGTTTGAAGATGATGATGCATTAGAGCGTGCTACTGATGCAGAGTGGTTACTT
TTACCTGCGGGGAATGGCACTTCTGGTTTAGAAGCTATTGTTTTAAGCAGAGATGAGGAT
GTCCCTTGCACTATCGGGTCTGTCTCACATACAAACATTCCTGGAAAATCAGTAGTTTTA
CCTTTGCCACAGGTGTCTGAAATGCACGCCCGAATATCCTGCAAAGACGGAGCATTTTTT
GTAACTGATTTACAAAGCGAACATGGCACCTGGGTTACAGATAATGAAGGCAGAAGATAC
CGGACGTCTCCAAACTTCCCTACACGTTTTCATCCATCAGATGTTATCGAATTTGGTTCT
GATAAGGCAGCATTTCGTGTAAAGGCAATGAAATTTCCTCCAAAAACTACTGAAAGGAAG
GAAGAGCGTGAAGCTGTGGGGGCAGCGTAA