Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400010254
CDS Infomation

pacid=37424894 polypeptide=PGSC0003DMP400007153 locus=PGSC0003DMG400004012 ID=PGSC0003DMT400010254.v4.03 annot-version=v4.03
Sequence

ATGGCTGAAACTACACCTAATGGCCGGCCCGAGAGTGCCAATATTGATGGACCGACCAAT
CCTATGGTTACGCCTATTTTAACAGATCTCTATCAGTTTACTATGGCCTATGCTTACTGG
AAAGCTGGAAAACACAATGAACGAGCTGTGTTTGACTTGTATTTTCGGAGGAATCCATTT
GGTGGTGAATATACAATATTTGCTGGTTTAGAAGAGTGCATAAAGTTTATTGCCAACTTT
AAATTTACTGAGGATGAGATAGATTTTATCAGGTCATCGTTGCCCTCGTCATGTGAGGAT
GGCTTCTTTGAGTACCTTCGAAGACTTGACTGTTCAGATATTGAGATATATTCTATTTCT
GAAGGATCAGTAGTTTTTCCCAAGGTACCGCTGATGAGGATTGAAGGACCAGTTGCTGTG
GTTCAACTACTGGAAACACCATTTGTAAACCTCATAAATTATGCATCACTAGTTACTACT
AATGCTGCAAGACACCGTTTCGTTGCTGGAAGGTCCAAAATATTGCTTGAATTTGGGCTT
AGGAGAGCACAGGGTCCTGATGGTGGTATATCAGCATCCAAGTATTGCTACATGGGTGGA
TTTGATGCGACAAGCAATGTGGCAGCTGGAAAGCTGTTTGGAATCCCACTCCGTGGGACA
CATTCCCATGCCTTTGTTAGCTCATTTATGAGCCCAGATGAGATCATAGAGAAATCACTT
AAACATCATAATGGTTCTAGTGTTTGTGAGGATTTTGTTAGTCTGGTACAGACATGGCTT
GACAAATTAAAGTGGTCACACTTATTAGGTGGAATTTTCAGTGAGACAAACCAAAGTGAG
TTAGCAGCTTTCGCCTCATATGCACTTGCATTTCCTGGAAGTTTTTTGGCCCTTGTAGAC
ACTTATGATGTCATGAGAAGTGGTCTTCCAAATTTTTGTGCAGTTGCTCTTGCACTTAAT
GATTTGGGGTATAAAGCAGTGGGCATTAGACTAGACTCTGGTGATCTTGCTTATCAGTCA
TGTGAAGCTAGGAAATTCTTTTGTGCTATTGAGAAAGAATTTGGATTGCCTGCTTTTGGA
AAGACGAGTATCACAGCTAGCAATGATCTTAATGAAGAAACTCTGGATGCACTAAATAAA
CAAGGTCACGAGGTTGATGCATTTGGTATTGGTACACATTTAGTTACCTGTTATGCTCAA
GCTGCTCTGGGTGTTGTTTTCAAGTTAGTTGAAATAAACAATCAGCCTAGAATCAAACTT
TCTGAAGACGTATCAAAGGTCTCTATTCCATGCAAAAAGCGGTGTTACAGATTGTATGGG
AAGGAAGGATACCCCCTTGTAGACATAATGACTGGTGAAAATGAGCCACATCCCAAGGTA
GGTGAACGAATTTTATGCCGCCACCCATTTAGTGAATCTAAAAGGGCATACGTAGTGCCT
CAGCGTGTTGAGGAACTTTTAAAGTGCTTTTGGCCTGGAAAGTCAGATAAAACAAGAGAA
GACCTTCCTCCTCTGAAGGAGATCAGGGAAAGATGTATTGAACAACTGGACCAAATGCGA
CCAGATCACATGAGAAGGCTGAACCCAACACCATACAAGGTCAGTGTAAGTGCAAAGTTG
TATGATTTCATCCATTTCCTCTGGCTCAATGAAGCACCTGTTGGGGAGTTGCAGTGA

Peptide Sequence

PEP ID

PGSC0003DMP400007153
PEP Infomation

pacid=37424894 transcript=PGSC0003DMT400010254 locus=PGSC0003DMG400004012 ID=PGSC0003DMT400010254.v4.03 annot-version=v4.03
Sequence

MAETTPNGRPESANIDGPTNPMVTPILTDLYQFTMAYAYWKAGKHNERAVFDLYFRRNPF
GGEYTIFAGLEECIKFIANFKFTEDEIDFIRSSLPSSCEDGFFEYLRRLDCSDIEIYSIS
EGSVVFPKVPLMRIEGPVAVVQLLETPFVNLINYASLVTTNAARHRFVAGRSKILLEFGL
RRAQGPDGGISASKYCYMGGFDATSNVAAGKLFGIPLRGTHSHAFVSSFMSPDEIIEKSL
KHHNGSSVCEDFVSLVQTWLDKLKWSHLLGGIFSETNQSELAAFASYALAFPGSFLALVD
TYDVMRSGLPNFCAVALALNDLGYKAVGIRLDSGDLAYQSCEARKFFCAIEKEFGLPAFG
KTSITASNDLNEETLDALNKQGHEVDAFGIGTHLVTCYAQAALGVVFKLVEINNQPRIKL
SEDVSKVSIPCKKRCYRLYGKEGYPLVDIMTGENEPHPKVGERILCRHPFSESKRAYVVP
QRVEELLKCFWPGKSDKTREDLPPLKEIRERCIEQLDQMRPDHMRRLNPTPYKVSVSAKL
YDFIHFLWLNEAPVGELQ*

Transcript Sequence

Transcript ID

PGSC0003DMT400010254
Transcript Infomation

pacid=37424894 locus=PGSC0003DMG400004012 ID=PGSC0003DMT400010254.v4.03 annot-version=v4.03
Sequence

ATGGCTGAAACTACACCTAATGGCCGGCCCGAGAGTGCCAATATTGATGGACCGACCAAT
CCTATGGTTACGCCTATTTTAACAGATCTCTATCAGTTTACTATGGCCTATGCTTACTGG
AAAGCTGGAAAACACAATGAACGAGCTGTGTTTGACTTGTATTTTCGGAGGAATCCATTT
GGTGGTGAATATACAATATTTGCTGGTTTAGAAGAGTGCATAAAGTTTATTGCCAACTTT
AAATTTACTGAGGATGAGATAGATTTTATCAGGTCATCGTTGCCCTCGTCATGTGAGGAT
GGCTTCTTTGAGTACCTTCGAAGACTTGACTGTTCAGATATTGAGATATATTCTATTTCT
GAAGGATCAGTAGTTTTTCCCAAGGTACCGCTGATGAGGATTGAAGGACCAGTTGCTGTG
GTTCAACTACTGGAAACACCATTTGTAAACCTCATAAATTATGCATCACTAGTTACTACT
AATGCTGCAAGACACCGTTTCGTTGCTGGAAGGTCCAAAATATTGCTTGAATTTGGGCTT
AGGAGAGCACAGGGTCCTGATGGTGGTATATCAGCATCCAAGTATTGCTACATGGGTGGA
TTTGATGCGACAAGCAATGTGGCAGCTGGAAAGCTGTTTGGAATCCCACTCCGTGGGACA
CATTCCCATGCCTTTGTTAGCTCATTTATGAGCCCAGATGAGATCATAGAGAAATCACTT
AAACATCATAATGGTTCTAGTGTTTGTGAGGATTTTGTTAGTCTGGTACAGACATGGCTT
GACAAATTAAAGTGGTCACACTTATTAGGTGGAATTTTCAGTGAGACAAACCAAAGTGAG
TTAGCAGCTTTCGCCTCATATGCACTTGCATTTCCTGGAAGTTTTTTGGCCCTTGTAGAC
ACTTATGATGTCATGAGAAGTGGTCTTCCAAATTTTTGTGCAGTTGCTCTTGCACTTAAT
GATTTGGGGTATAAAGCAGTGGGCATTAGACTAGACTCTGGTGATCTTGCTTATCAGTCA
TGTGAAGCTAGGAAATTCTTTTGTGCTATTGAGAAAGAATTTGGATTGCCTGCTTTTGGA
AAGACGAGTATCACAGCTAGCAATGATCTTAATGAAGAAACTCTGGATGCACTAAATAAA
CAAGGTCACGAGGTTGATGCATTTGGTATTGGTACACATTTAGTTACCTGTTATGCTCAA
GCTGCTCTGGGTGTTGTTTTCAAGTTAGTTGAAATAAACAATCAGCCTAGAATCAAACTT
TCTGAAGACGTATCAAAGGTCTCTATTCCATGCAAAAAGCGGTGTTACAGATTGTATGGG
AAGGAAGGATACCCCCTTGTAGACATAATGACTGGTGAAAATGAGCCACATCCCAAGGTA
GGTGAACGAATTTTATGCCGCCACCCATTTAGTGAATCTAAAAGGGCATACGTAGTGCCT
CAGCGTGTTGAGGAACTTTTAAAGTGCTTTTGGCCTGGAAAGTCAGATAAAACAAGAGAA
GACCTTCCTCCTCTGAAGGAGATCAGGGAAAGATGTATTGAACAACTGGACCAAATGCGA
CCAGATCACATGAGAAGGCTGAACCCAACACCATACAAGGTCAGTGTAAGTGCAAAGTTG
TATGATTTCATCCATTTCCTCTGGCTCAATGAAGCACCTGTTGGGGAGTTGCAGTGA