Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400010233
CDS Infomation

pacid=37427982 polypeptide=PGSC0003DMP400007141 locus=PGSC0003DMG400004007 ID=PGSC0003DMT400010233.v4.03 annot-version=v4.03
Sequence

ATGGATCACAAATCGTGGCCCTGGAAGAAAAAATCCACAGAAAAGAACATGGTTACTGAA
GACAAAGCAAATCTCTCTTTGAGAAGAAATGACGAAGAGACACTATCTAGTGATAAAGCT
GATCTAGAAAGAGAGCTGAAGGTTGTGACTGACAAGCTTTCTTCTGCTCTGGTGGAATGT
CGTGCTAAAGATGATTTTGCACAGAAACAGATGAAAATTGCACAGGAAGCAATTGCAGGC
TGGGAGAAGACTGAAACTGAAGCAAGATTGCTAAAGCAGGAGCTAGAAAAAGCTCTACAG
CAGAGCATAGCTGGTGAAGAGAGATTAGTCAACTTGGATGCAGCACTCAAGGAATGTATG
CAGCAGTTGCGTTTCATTCGAGATGAGCAGGAGAACAGGATTCATGACGCAGTATCAAAC
GCATCAAAAGAATTTGAAAAAACAAGATTTCTCTTAGAGAAAAAGTTAGCAGATGCTGGG
CAGAAGCTTTCACGATTAGGTTCCGAAAACACTCAGCTTAGTATGGCTCTCATGGCAAAG
GAGAAGGCAACAGGTCATTTAAAAGGAGAAATAGATCGGGCAGAAGCAGATTTCAGTGCC
TTGATGACGCGGCTGGAATCTGTAGAAAAAGATAATGCTTCTTTGCGGTATGAGGTACGG
GTCCTTGAGAAGGAGCTTGAGATCCGGAATGAGGAGAGAGAATTTAATCGCCGAACAGCT
GATGTTGCACACAAGCAACATCTGGAGAGTGTGAAGAAAATTGCACAACTGGACTCGGAA
TGTCAAAGGCTACGCATCCTTGTTAGAAAGAGGTTGCCAGGCCCTGCCGCCTTGGCCAAA
ATGAAGACTGAAGTTGAGATGCTGGGGAAGGATCATGCTAAAATGAGGATAAGGAAGTCA
AATCCGTCTCCAAATGGTTCAGTGGACTTAACTTCAGAGACGGCTCCTGATACTCCGAAC
AGAAATATTAACTTCCTCTCTGAGCAATTATGCATGCTGGAAGAGGAAAATAGGACTCTG
AAAGAAGCTCTTAACAAAAGAGCTAATGAACTCATACTTTCTAGGATGACAAATGCTCAA
ACAACTGCTGAACTAGAAAAATATCTTCCCTCTGCGCAGGAACTATCTGTGACATCACTG
TCTGATATGGGCAGTGATGACATAGGTGGCTGTTCCGAGTCTTGGGCTTCTGCACTAATG
TCAGAGCTGGAGCATTTCAAAAATGAGAAACAAATTGGTCCACCTTCATCTATAAGTGTA
GGAGCTTCAGATATAAATCTGATGGATGACTTTGCAGAGATGGAAAAATTAGCGGTTGAG
TCTACAGTTAACCCTCTGGGAGCTGTTCATCATGCCTTACCAAGGGAAAATGGAAATGAG
GATGCTTTGGAGTCTCAGTTATGCTCTCATTCATCAGAAGCAGAAAGTACAGAGAGAGTT
CCTGTGACAGATCGTTATGTTTCCAGCAATGATAATCAGTCAAAAGCAATATTGACAGAT
AAAGCTTCTGGTGAAGTTGATAACATACTGAAAATGCTCTTGGAGCATGGACATGTAACT
GAAAGAAACCCATACGAAATACTGGAAGATATCAGAACTGCCCTGGCACAGAAGTTTCCC
TCGAGTAAGAACCCTGCGGAAGCAAATGAAAGTGTAATAGATACTGATGTTACATGTTCT
CCCAACAATGGTGACTGTAAGGAGATACATACAGGAGCTGGTGATAATGTTTCATCAGAA
AGAAAGGGTGAACCAGATATGTTGTCATTTATGGGTATATCAATTAATAAGGTTATTGAT
ATCATAGAAGGAATCAATATACCCTCGACAGATGATAGTATTCCAGAAATCTTATCTCAC
AATGGTAATGGACTTCTACCATTTGAAAGTGCATCGAAGGAGACAGCCTACATGGTTCGT
GTTTTCCAGTGGAAATCTTCAGAACTCTCTGCTGTTCTTCAAGAATTTGTCCAAACATGC
CGTGATTTATTGAATGGAAAGGTTCGCATTGAGAAGTTCACTGAAAAACTAACTAGGACC
CTGGAATGGATTGTGAACCATTGTTTTTCCCTTCAAGATGTTTCAAGCATGAAGGATACT
ATAAAAAGCCATTTTGACTGGGGAATGGAAACTGGGGTGATTAATCCTATATTTGAATTT
GATAAACTTCAGACTGAAAGAGGAAACCCATTATACTCTCCTGTTTCTACCTCACTCGCT
CGGATGAGTTATTTGCCAGAGAAAGAAGTTCTACCATCTGTCGATAATGAAAGTCAATTA
CCGAAAGATGAGTTTCCGGAAGAGGGAGCTACAAAGGTGGATTTGGAGGGAAAACTGGAA
GCAGAAACTCTCCGAAGCGATTCCTTGATGGTTCAACTTCAGGAATCAGAGAAAACAATA
AAAGGCCTGGAAAAAGAAGTAGAAAATCTCAGACAGTCAAAGGGGATGATTGAGGATCAA
ATTGAGAAAGAAAAAATGGTGAAAGAAGACCTTGAGATGCAATTCGAAGCAGCTAAACTG
GAACTGAATGAAGCTTGTCGAAAGGCTTGCTGTTTGGAGAAGGAACTCGAGGACCAAAAT
AAATCCTATAAGAAGCTCGATTCTGCATGCCATATGCTTCAGTTGCAGAAAGAAAGCACG
GAAAAAATGGAGTTATCAGAGAATGCTGAGGTGGACCCTGAAGAAAAGCTTCTTCAAAGC
GATTGGGAGATCACTGCAGCTTCAGAAAAGTTGGCAGAGTGTCAAGAGACTATTCTGAAC
CTAGGGAAGCAGTTGAAGGCATTGGCCTCGCCTGGGGATGCAGCTCTCTTTGATAAGGTG
ATATCTACAACTTCAGAAACAACTAGTGGTACCATGACAACCCCAAAGAAAAGTTTTGGA
CGCCGTTCATCTCTTCTTGACAAGATGCTGGCTGAGGATGAAATGGGATCTCCTACTACC
AAGGAAGTCATTCCGGATGCCAAGAGAAATACTTTCTCAAGTGTTGATGGATCAGTGAAA
CTACCAGAAAAGTCTCCATTGACAAATGGGAGTGCGCATTCAGGATATGAGGCTGTAACT
GGCTCCCTGCCTATCATACCTAACAAGAAAAGAAATGTTCTTGGATTGTGGAGAAAGTTG
TTGCGAAAAGGTAAGAAAAATAGTAACAAGACGAAACTTAAGGTATGA

Peptide Sequence

PEP ID

PGSC0003DMP400007141
PEP Infomation

pacid=37427982 transcript=PGSC0003DMT400010233 locus=PGSC0003DMG400004007 ID=PGSC0003DMT400010233.v4.03 annot-version=v4.03
Sequence

MDHKSWPWKKKSTEKNMVTEDKANLSLRRNDEETLSSDKADLERELKVVTDKLSSALVEC
RAKDDFAQKQMKIAQEAIAGWEKTETEARLLKQELEKALQQSIAGEERLVNLDAALKECM
QQLRFIRDEQENRIHDAVSNASKEFEKTRFLLEKKLADAGQKLSRLGSENTQLSMALMAK
EKATGHLKGEIDRAEADFSALMTRLESVEKDNASLRYEVRVLEKELEIRNEEREFNRRTA
DVAHKQHLESVKKIAQLDSECQRLRILVRKRLPGPAALAKMKTEVEMLGKDHAKMRIRKS
NPSPNGSVDLTSETAPDTPNRNINFLSEQLCMLEEENRTLKEALNKRANELILSRMTNAQ
TTAELEKYLPSAQELSVTSLSDMGSDDIGGCSESWASALMSELEHFKNEKQIGPPSSISV
GASDINLMDDFAEMEKLAVESTVNPLGAVHHALPRENGNEDALESQLCSHSSEAESTERV
PVTDRYVSSNDNQSKAILTDKASGEVDNILKMLLEHGHVTERNPYEILEDIRTALAQKFP
SSKNPAEANESVIDTDVTCSPNNGDCKEIHTGAGDNVSSERKGEPDMLSFMGISINKVID
IIEGINIPSTDDSIPEILSHNGNGLLPFESASKETAYMVRVFQWKSSELSAVLQEFVQTC
RDLLNGKVRIEKFTEKLTRTLEWIVNHCFSLQDVSSMKDTIKSHFDWGMETGVINPIFEF
DKLQTERGNPLYSPVSTSLARMSYLPEKEVLPSVDNESQLPKDEFPEEGATKVDLEGKLE
AETLRSDSLMVQLQESEKTIKGLEKEVENLRQSKGMIEDQIEKEKMVKEDLEMQFEAAKL
ELNEACRKACCLEKELEDQNKSYKKLDSACHMLQLQKESTEKMELSENAEVDPEEKLLQS
DWEITAASEKLAECQETILNLGKQLKALASPGDAALFDKVISTTSETTSGTMTTPKKSFG
RRSSLLDKMLAEDEMGSPTTKEVIPDAKRNTFSSVDGSVKLPEKSPLTNGSAHSGYEAVT
GSLPIIPNKKRNVLGLWRKLLRKGKKNSNKTKLKV*

Transcript Sequence

Transcript ID

PGSC0003DMT400010233
Transcript Infomation

pacid=37427982 locus=PGSC0003DMG400004007 ID=PGSC0003DMT400010233.v4.03 annot-version=v4.03
Sequence

ATGGATCACAAATCGTGGCCCTGGAAGAAAAAATCCACAGAAAAGAACATGGTTACTGAA
GACAAAGCAAATCTCTCTTTGAGAAGAAATGACGAAGAGACACTATCTAGTGATAAAGCT
GATCTAGAAAGAGAGCTGAAGGTTGTGACTGACAAGCTTTCTTCTGCTCTGGTGGAATGT
CGTGCTAAAGATGATTTTGCACAGAAACAGATGAAAATTGCACAGGAAGCAATTGCAGGC
TGGGAGAAGACTGAAACTGAAGCAAGATTGCTAAAGCAGGAGCTAGAAAAAGCTCTACAG
CAGAGCATAGCTGGTGAAGAGAGATTAGTCAACTTGGATGCAGCACTCAAGGAATGTATG
CAGCAGTTGCGTTTCATTCGAGATGAGCAGGAGAACAGGATTCATGACGCAGTATCAAAC
GCATCAAAAGAATTTGAAAAAACAAGATTTCTCTTAGAGAAAAAGTTAGCAGATGCTGGG
CAGAAGCTTTCACGATTAGGTTCCGAAAACACTCAGCTTAGTATGGCTCTCATGGCAAAG
GAGAAGGCAACAGGTCATTTAAAAGGAGAAATAGATCGGGCAGAAGCAGATTTCAGTGCC
TTGATGACGCGGCTGGAATCTGTAGAAAAAGATAATGCTTCTTTGCGGTATGAGGTACGG
GTCCTTGAGAAGGAGCTTGAGATCCGGAATGAGGAGAGAGAATTTAATCGCCGAACAGCT
GATGTTGCACACAAGCAACATCTGGAGAGTGTGAAGAAAATTGCACAACTGGACTCGGAA
TGTCAAAGGCTACGCATCCTTGTTAGAAAGAGGTTGCCAGGCCCTGCCGCCTTGGCCAAA
ATGAAGACTGAAGTTGAGATGCTGGGGAAGGATCATGCTAAAATGAGGATAAGGAAGTCA
AATCCGTCTCCAAATGGTTCAGTGGACTTAACTTCAGAGACGGCTCCTGATACTCCGAAC
AGAAATATTAACTTCCTCTCTGAGCAATTATGCATGCTGGAAGAGGAAAATAGGACTCTG
AAAGAAGCTCTTAACAAAAGAGCTAATGAACTCATACTTTCTAGGATGACAAATGCTCAA
ACAACTGCTGAACTAGAAAAATATCTTCCCTCTGCGCAGGAACTATCTGTGACATCACTG
TCTGATATGGGCAGTGATGACATAGGTGGCTGTTCCGAGTCTTGGGCTTCTGCACTAATG
TCAGAGCTGGAGCATTTCAAAAATGAGAAACAAATTGGTCCACCTTCATCTATAAGTGTA
GGAGCTTCAGATATAAATCTGATGGATGACTTTGCAGAGATGGAAAAATTAGCGGTTGAG
TCTACAGTTAACCCTCTGGGAGCTGTTCATCATGCCTTACCAAGGGAAAATGGAAATGAG
GATGCTTTGGAGTCTCAGTTATGCTCTCATTCATCAGAAGCAGAAAGTACAGAGAGAGTT
CCTGTGACAGATCGTTATGTTTCCAGCAATGATAATCAGTCAAAAGCAATATTGACAGAT
AAAGCTTCTGGTGAAGTTGATAACATACTGAAAATGCTCTTGGAGCATGGACATGTAACT
GAAAGAAACCCATACGAAATACTGGAAGATATCAGAACTGCCCTGGCACAGAAGTTTCCC
TCGAGTAAGAACCCTGCGGAAGCAAATGAAAGTGTAATAGATACTGATGTTACATGTTCT
CCCAACAATGGTGACTGTAAGGAGATACATACAGGAGCTGGTGATAATGTTTCATCAGAA
AGAAAGGGTGAACCAGATATGTTGTCATTTATGGGTATATCAATTAATAAGGTTATTGAT
ATCATAGAAGGAATCAATATACCCTCGACAGATGATAGTATTCCAGAAATCTTATCTCAC
AATGGTAATGGACTTCTACCATTTGAAAGTGCATCGAAGGAGACAGCCTACATGGTTCGT
GTTTTCCAGTGGAAATCTTCAGAACTCTCTGCTGTTCTTCAAGAATTTGTCCAAACATGC
CGTGATTTATTGAATGGAAAGGTTCGCATTGAGAAGTTCACTGAAAAACTAACTAGGACC
CTGGAATGGATTGTGAACCATTGTTTTTCCCTTCAAGATGTTTCAAGCATGAAGGATACT
ATAAAAAGCCATTTTGACTGGGGAATGGAAACTGGGGTGATTAATCCTATATTTGAATTT
GATAAACTTCAGACTGAAAGAGGAAACCCATTATACTCTCCTGTTTCTACCTCACTCGCT
CGGATGAGTTATTTGCCAGAGAAAGAAGTTCTACCATCTGTCGATAATGAAAGTCAATTA
CCGAAAGATGAGTTTCCGGAAGAGGGAGCTACAAAGGTGGATTTGGAGGGAAAACTGGAA
GCAGAAACTCTCCGAAGCGATTCCTTGATGGTTCAACTTCAGGAATCAGAGAAAACAATA
AAAGGCCTGGAAAAAGAAGTAGAAAATCTCAGACAGTCAAAGGGGATGATTGAGGATCAA
ATTGAGAAAGAAAAAATGGTGAAAGAAGACCTTGAGATGCAATTCGAAGCAGCTAAACTG
GAACTGAATGAAGCTTGTCGAAAGGCTTGCTGTTTGGAGAAGGAACTCGAGGACCAAAAT
AAATCCTATAAGAAGCTCGATTCTGCATGCCATATGCTTCAGTTGCAGAAAGAAAGCACG
GAAAAAATGGAGTTATCAGAGAATGCTGAGGTGGACCCTGAAGAAAAGCTTCTTCAAAGC
GATTGGGAGATCACTGCAGCTTCAGAAAAGTTGGCAGAGTGTCAAGAGACTATTCTGAAC
CTAGGGAAGCAGTTGAAGGCATTGGCCTCGCCTGGGGATGCAGCTCTCTTTGATAAGGTG
ATATCTACAACTTCAGAAACAACTAGTGGTACCATGACAACCCCAAAGAAAAGTTTTGGA
CGCCGTTCATCTCTTCTTGACAAGATGCTGGCTGAGGATGAAATGGGATCTCCTACTACC
AAGGAAGTCATTCCGGATGCCAAGAGAAATACTTTCTCAAGTGTTGATGGATCAGTGAAA
CTACCAGAAAAGTCTCCATTGACAAATGGGAGTGCGCATTCAGGATATGAGGCTGTAACT
GGCTCCCTGCCTATCATACCTAACAAGAAAAGAAATGTTCTTGGATTGTGGAGAAAGTTG
TTGCGAAAAGGTAAGAAAAATAGTAACAAGACGAAACTTAAGGTATGA